Cow genome map
| Conread name: | Ss1.1-Emb1-C0005212_P09.5 |
| Conread position: | 1-1115 |
| Cow position: | chrX:28778000-28779110 (view UCSC Genome Browser custom track) |
| Alignm length: | 1115 |
| Alignm identity: | 954 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 70-214 |
| Cow position: | chrX:28796111-28795968 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 130 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 208-305 |
| Cow position: | chrX:28794770-28794673 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-398 |
| Cow position: | chrX:28794508-28794408 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 399-562 |
| Cow position: | chrX:28794299-28794136 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-704 |
| Cow position: | chrX:28793828-28793680 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 132 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 700-850 |
| Cow position: | chrX:28793604-28793454 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 847-1033 |
| Cow position: | chrX:28793276-28793090 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1032-1150 |
| Cow position: | chrX:28792999-28792881 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1050-1542 |
| Cow position: | chrX:28779315-28779812 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 488 |
| Conread position: | 1149-1303 |
| Cow position: | chrX:28792605-28792451 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 138 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1302-1439 |
| Cow position: | chrX:28792207-28792070 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1436-1542 |
| Cow position: | chrX:28791881-28791776 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1580-1734 |
| Cow position: | chrX:28792224-28792070 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1592-1837 |
| Cow position: | chrX:28779568-28779812 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 0 |
| Conread position: | 1731-1837 |
| Cow position: | chrX:28791881-28791776 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.