Cow genome map

Conread name: Ss1.1-Emb1-C0005213_E07.5

Conread position: 1-173
Cow position: chr11:34830453-34830273 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 50

Conread position: 1-235
Cow position: chr11:50916594-50916339 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1-250
Cow position: chr11:4067972-4068239 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 46, 109

Conread position: 1-282
Cow position: chr11:62009307-62009028 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 35

Conread position: 1-464
Cow position: chr11:63260718-63260239 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 318
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 35

Conread position: 1-598
Cow position: chr11:47193067-47193678 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 49

Conread position: 2-151
Cow position: chr11:21938137-21937987 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 2-152
Cow position: chr11:47980294-47980149 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 2-153
Cow position: chr11:44818654-44818813 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 2-157
Cow position: chr11:6877368-6877530 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 111

Conread position: 2-157
Cow position: chr11:53773160-53773323 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 2-159
Cow position: chr11:4391086-4390934 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 2-159
Cow position: chr11:41177087-41176923 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 2-159
Cow position: chr11:54104966-54104802 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 120

Conread position: 2-164
Cow position: chr11:21983979-21984149 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 2-170
Cow position: chr11:13162026-13162203 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 154

Conread position: 2-170
Cow position: chr11:59367549-59367374 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 78

Conread position: 2-172
Cow position: chr11:75354872-75355049 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 167

Conread position: 2-174
Cow position: chr11:10698254-10698075 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 167

Conread position: 2-174
Cow position: chr11:45647292-45647111 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 169

Conread position: 2-174
Cow position: chr11:47676720-47676899 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 34

Conread position: 2-174
Cow position: chr11:63652154-63651975 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 167

Conread position: 2-174
Cow position: chr11:64052830-64052651 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 34

Conread position: 2-176
Cow position: chr11:62239028-62239211 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 2-206
Cow position: chr11:29323815-29323603 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 34

Conread position: 2-211
Cow position: chr11:12341674-12341883 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 34

Conread position: 2-211
Cow position: chr11:37419526-37419316 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 34

Conread position: 2-211
Cow position: chr11:53750749-53750542 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 34

Conread position: 2-211
Cow position: chr11:69588174-69588383 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 34

Conread position: 2-216
Cow position: chr11:26118516-26118303 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 49, 167

Conread position: 2-217
Cow position: chr11:70977897-70977683 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 34

Conread position: 2-226
Cow position: chr11:81931524-81931302 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 164

Conread position: 2-233
Cow position: chr11:37911906-37912129 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 207, 33

Conread position: 2-238
Cow position: chr11:21832420-21832185 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 55, 45

Conread position: 2-246
Cow position: chr11:27817723-27817480 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 149

Conread position: 2-247
Cow position: chr11:75558496-75558254 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 86

Conread position: 2-248
Cow position: chr11:18592218-18591979 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 19

Conread position: 2-248
Cow position: chr11:36167263-36167017 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 167

Conread position: 2-249
Cow position: chr11:46195116-46195363 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 2-250
Cow position: chr11:15373182-15373431 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 18, 84

Conread position: 2-250
Cow position: chr11:37292401-37292650 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 168

Conread position: 2-250
Cow position: chr11:51028910-51029146 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 202, 49

Conread position: 2-267
Cow position: chr11:59603800-59604064 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 156

Conread position: 2-269
Cow position: chr11:6644769-6645031 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 164

Conread position: 2-269
Cow position: chr11:27326035-27326296 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 112

Conread position: 2-271
Cow position: chr11:1268010-1267742 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:2772831-2773099 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 167

Conread position: 2-271
Cow position: chr11:5229535-5229267 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 167

Conread position: 2-271
Cow position: chr11:7152491-7152759 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 167

Conread position: 2-271
Cow position: chr11:10043739-10044007 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:14287280-14287548 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:14297273-14297541 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:18398237-18397969 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 167

Conread position: 2-271
Cow position: chr11:18587201-18586933 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:20285123-20284855 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:23866487-23866755 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:26512139-26511871 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:27497015-27497283 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:28620115-28620383 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:29614841-29615109 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 167

Conread position: 2-271
Cow position: chr11:30000156-30000424 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:32395725-32395457 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:32952877-32953146 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 167

Conread position: 2-271
Cow position: chr11:34638010-34637742 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:38573990-38573722 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 167

Conread position: 2-271
Cow position: chr11:40636312-40636580 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 167

Conread position: 2-271
Cow position: chr11:41314790-41315059 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 33

Conread position: 2-271
Cow position: chr11:48659241-48659506 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 78

Conread position: 2-271
Cow position: chr11:56622917-56623185 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:57594596-57594328 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:57624531-57624263 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 167

Conread position: 2-271
Cow position: chr11:61060065-61059797 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:61397126-61396858 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 167

Conread position: 2-271
Cow position: chr11:61891499-61891761 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 32

Conread position: 2-271
Cow position: chr11:65670837-65671105 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:69006325-69006593 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 167

Conread position: 2-271
Cow position: chr11:81359932-81360200 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 167

Conread position: 2-271
Cow position: chr11:81551638-81551372 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:82990872-82991141 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 2-271
Cow position: chr11:83001523-83001787 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 2-273
Cow position: chr11:35141841-35141571 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 34

Conread position: 2-274
Cow position: chr11:26337399-26337128 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 167

Conread position: 2-274
Cow position: chr11:35541582-35541311 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 34

Conread position: 2-278
Cow position: chr11:32749653-32749927 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 41, 15

Conread position: 2-282
Cow position: chr11:2421962-2422240 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-282
Cow position: chr11:3999036-3998754 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 191
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 168

Conread position: 2-282
Cow position: chr11:16547455-16547177 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 167

Conread position: 2-282
Cow position: chr11:22843192-22842914 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-282
Cow position: chr11:23495433-23495693 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 46

Conread position: 2-282
Cow position: chr11:25742645-25742923 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 34

Conread position: 2-282
Cow position: chr11:33012438-33012715 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 38

Conread position: 2-282
Cow position: chr11:34277297-34277575 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 56, 167

Conread position: 2-282
Cow position: chr11:52846970-52847248 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 167

Conread position: 2-282
Cow position: chr11:58381039-58381317 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 34

Conread position: 2-282
Cow position: chr11:61876312-61876589 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 2-282
Cow position: chr11:63389987-63389710 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 34

Conread position: 2-282
Cow position: chr11:75402033-75401759 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 27

Conread position: 2-284
Cow position: chr11:27724412-27724133 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-285
Cow position: chr11:17104211-17103928 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 167

Conread position: 2-305
Cow position: chr11:11996338-11996042 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 166

Conread position: 2-310
Cow position: chr11:40402285-40401982 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 56, 29

Conread position: 2-315
Cow position: chr11:27242777-27243103 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 59, 113

Conread position: 2-315
Cow position: chr11:62215931-62215607 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 98

Conread position: 2-319
Cow position: chr11:15695268-15694947 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 44, 11

Conread position: 2-322
Cow position: chr11:64047866-64048196 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 166

Conread position: 2-330
Cow position: chr11:61431242-61430914 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 34

Conread position: 2-343
Cow position: chr11:54134706-54134352 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 166

Conread position: 2-345
Cow position: chr11:11315334-11314989 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 213
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 34

Conread position: 2-349
Cow position: chr11:7705165-7705538 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 45, 282

Conread position: 2-352
Cow position: chr11:33001548-33001909 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 112

Conread position: 2-357
Cow position: chr11:13942362-13942708 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 161

Conread position: 2-361
Cow position: chr11:40251061-40250683 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 173

Conread position: 2-370
Cow position: chr11:84774657-84775029 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 48, 173

Conread position: 2-381
Cow position: chr11:78819649-78820035 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 266
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 32, 170

Conread position: 2-381
Cow position: chr11:84891219-84890812 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 45, 144

Conread position: 2-382
Cow position: chr11:34412645-34413037 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 279
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 163

Conread position: 2-388
Cow position: chr11:8495583-8495987 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 166

Conread position: 2-405
Cow position: chr11:66663925-66663511 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 286
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 2-406
Cow position: chr11:41239726-41239308 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 167

Conread position: 2-407
Cow position: chr11:29947386-29946967 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 254

Conread position: 2-416
Cow position: chr11:4384176-4384591 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 118

Conread position: 2-425
Cow position: chr11:72016407-72015970 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 302
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 34

Conread position: 2-434
Cow position: chr11:10810526-10810082 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 307
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 167

Conread position: 2-434
Cow position: chr11:31833767-31833320 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 298
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 34

Conread position: 2-437
Cow position: chr11:41260434-41259984 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 300
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 34

Conread position: 2-437
Cow position: chr11:64334403-64334844 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 306
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 53, 167

Conread position: 2-446
Cow position: chr11:44356393-44355945 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 307
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 34

Conread position: 2-450
Cow position: chr11:7120479-7120014 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 310
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-450
Cow position: chr11:40819097-40818629 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 165

Conread position: 2-453
Cow position: chr11:13015332-13014865 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:17078460-17078926 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 318
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:21929627-21929161 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 318
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:24334257-24334723 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 320
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:30929877-30930333 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 296
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:33146951-33146485 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 314
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:38819003-38818537 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:39078565-39078099 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:41164135-41163669 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:43536995-43536529 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 311
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 167

Conread position: 2-453
Cow position: chr11:46142494-46142027 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 318
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:47655290-47655753 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 312
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 28

Conread position: 2-453
Cow position: chr11:52179810-52180276 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:56827096-56827562 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 318
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:57253819-57254285 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 315
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:58884039-58883567 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 322
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:60629395-60628930 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 317
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:68136688-68137154 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 321
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 34

Conread position: 2-453
Cow position: chr11:84184276-84184742 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 34

Conread position: 2-454
Cow position: chr11:2351013-2351481 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 313
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 34

Conread position: 2-454
Cow position: chr11:4597062-4597530 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 320
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 34

Conread position: 2-454
Cow position: chr11:13247573-13247106 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 167

Conread position: 2-454
Cow position: chr11:15286072-15285605 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 313
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 53, 79

Conread position: 2-454
Cow position: chr11:15560215-15559748 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 317
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 34

Conread position: 2-454
Cow position: chr11:41261663-41262130 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 314
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 34

Conread position: 2-454
Cow position: chr11:57760346-57760812 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 314
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 34

Conread position: 2-454
Cow position: chr11:73798210-73797745 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 313
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-455
Cow position: chr11:8827329-8827790 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 310
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 127

Conread position: 2-456
Cow position: chr11:15047952-15048421 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 318
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 34

Conread position: 2-456
Cow position: chr11:28349114-28348645 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 314
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:2535184-2535661 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 317
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 156

Conread position: 2-458
Cow position: chr11:2800765-2800294 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 317
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:8367055-8367504 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 309
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:11876427-11876898 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 313
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:15495882-15496353 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 313
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 167

Conread position: 2-458
Cow position: chr11:17549653-17550124 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 315
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:19997151-19996681 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 317
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:21472779-21472314 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 315
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 165

Conread position: 2-458
Cow position: chr11:22617451-22616980 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 312
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 167

Conread position: 2-458
Cow position: chr11:23773749-23774220 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 312
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 167

Conread position: 2-458
Cow position: chr11:24136693-24137164 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 313
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 167

Conread position: 2-458
Cow position: chr11:32455548-32456011 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 310
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:32747102-32747573 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 313
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 167

Conread position: 2-458
Cow position: chr11:32763240-32763709 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 319
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:34278577-34279048 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 308
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 167

Conread position: 2-458
Cow position: chr11:39654657-39654186 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 314
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 167

Conread position: 2-458
Cow position: chr11:40404633-40404164 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 320
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 167

Conread position: 2-458
Cow position: chr11:41422287-41421816 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 322
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:45277610-45277135 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 327
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 136

Conread position: 2-458
Cow position: chr11:48885195-48885666 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 315
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:49505046-49505516 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 314
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 37

Conread position: 2-458
Cow position: chr11:52424624-52425090 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 304
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 171

Conread position: 2-458
Cow position: chr11:58137206-58137677 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 318
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 167

Conread position: 2-458
Cow position: chr11:58614194-58614674 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 329
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 60, 48

Conread position: 2-458
Cow position: chr11:67454433-67454903 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 313
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 167

Conread position: 2-458
Cow position: chr11:67919847-67919384 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 303
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 34

Conread position: 2-458
Cow position: chr11:72050486-72050957 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 318
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 167

Conread position: 2-458
Cow position: chr11:84967603-84968073 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 314
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 127

Conread position: 2-459
Cow position: chr11:8339859-8339391 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 166

Conread position: 2-460
Cow position: chr11:10076320-10076784 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 167

Conread position: 2-460
Cow position: chr11:23138530-23138039 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 84

Conread position: 2-460
Cow position: chr11:35579801-35580276 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 327
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 44, 32

Conread position: 2-460
Cow position: chr11:50153268-50152798 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 22

Conread position: 2-460
Cow position: chr11:62979023-62979506 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 167

Conread position: 2-460
Cow position: chr11:74316231-74316725 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 121

Conread position: 2-461
Cow position: chr11:10094898-10095360 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 2-461
Cow position: chr11:22342259-22341786 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 324
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 34

Conread position: 2-461
Cow position: chr11:25792147-25791678 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 321
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 167

Conread position: 2-461
Cow position: chr11:33294243-33293762 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 330
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 20

Conread position: 2-461
Cow position: chr11:39032631-39033105 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 315
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-461
Cow position: chr11:42292289-42291822 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 320
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 56, 161

Conread position: 2-461
Cow position: chr11:66733381-66733846 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 308
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 56, 167

Conread position: 2-461
Cow position: chr11:76369973-76369506 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 322
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 52, 149

Conread position: 2-464
Cow position: chr11:3496400-3496877 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 311
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 167

Conread position: 2-464
Cow position: chr11:5279001-5278523 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 318
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 2-464
Cow position: chr11:10948926-10948452 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 317
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 106

Conread position: 2-464
Cow position: chr11:17890176-17889711 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 330
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 37, 31

Conread position: 2-464
Cow position: chr11:20730731-20730258 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 315
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 166

Conread position: 2-464
Cow position: chr11:21620925-21621404 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 311
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 34

Conread position: 2-464
Cow position: chr11:23979385-23979862 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 321
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 167

Conread position: 2-464
Cow position: chr11:27447688-27448161 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 307
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 167

Conread position: 2-464
Cow position: chr11:30088371-30088848 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 319
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 167

Conread position: 2-464
Cow position: chr11:30165045-30165529 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 320
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 45, 217

Conread position: 2-464
Cow position: chr11:30837088-30837565 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 310
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 34

Conread position: 2-464
Cow position: chr11:32974045-32974522 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 310
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 167

Conread position: 2-464
Cow position: chr11:37285149-37284672 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 316
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 28, 36

Conread position: 2-464
Cow position: chr11:38649130-38649585 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 291
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 160

Conread position: 2-464
Cow position: chr11:41041150-41040673 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 322
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 34

Conread position: 2-464
Cow position: chr11:51034771-51035244 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 312
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 34

Conread position: 2-464
Cow position: chr11:54580366-54580842 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 326
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 34

Conread position: 2-464
Cow position: chr11:58947640-58947170 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 313
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 2-464
Cow position: chr11:66389520-66389043 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 316
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 167

Conread position: 2-464
Cow position: chr11:73138066-73138542 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 317
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 34

Conread position: 2-464
Cow position: chr11:77011584-77011107 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 321
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 34

Conread position: 2-464
Cow position: chr11:83356941-83357415 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 334
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 56, 159

Conread position: 2-465
Cow position: chr11:17113081-17112608 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 45

Conread position: 2-468
Cow position: chr11:35206976-35206494 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 326
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 167

Conread position: 2-471
Cow position: chr11:68571126-68570641 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 335
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 56, 167

Conread position: 2-474
Cow position: chr11:53314019-53313538 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 83

Conread position: 2-476
Cow position: chr11:27944108-27944597 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 301
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 34

Conread position: 2-477
Cow position: chr11:50236423-50235942 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 315
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 166

Conread position: 2-478
Cow position: chr11:26067634-26067147 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 166

Conread position: 2-481
Cow position: chr11:32198488-32198972 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 340
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 33

Conread position: 2-497
Cow position: chr11:9971412-9970929 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 337
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 74, 45

Conread position: 2-497
Cow position: chr11:77751220-77750713 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 348
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 167

Conread position: 2-498
Cow position: chr11:8525556-8525055 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 354
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 82

Conread position: 2-498
Cow position: chr11:13499566-13500075 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 355
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 30

Conread position: 2-498
Cow position: chr11:16262510-16261965 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 174

Conread position: 2-498
Cow position: chr11:21894602-21894102 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 345
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 128

Conread position: 2-498
Cow position: chr11:63847408-63847906 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 332
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 72

Conread position: 2-500
Cow position: chr11:71169029-71168528 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 351
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 42, 140

Conread position: 2-509
Cow position: chr11:27248041-27248561 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 349
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 82

Conread position: 2-536
Cow position: chr11:40458668-40459211 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 8

Conread position: 2-558
Cow position: chr11:33413788-33414361 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 32

Conread position: 2-582
Cow position: chr11:59366539-59365926 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 117

Conread position: 2-590
Cow position: chr11:17969030-17968450 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 394
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 167

Conread position: 2-593
Cow position: chr11:22932430-22931818 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 64

Conread position: 2-593
Cow position: chr11:75254988-75255559 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 44

Conread position: 2-598
Cow position: chr11:31866145-31866763 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 404
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 53, 83

Conread position: 2-602
Cow position: chr11:35881449-35882079 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 100

Conread position: 2-603
Cow position: chr11:63157363-63156755 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 114

Conread position: 2-604
Cow position: chr11:18509463-18508838 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 405
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 168

Conread position: 2-606
Cow position: chr11:4060481-4059889 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 143

Conread position: 2-608
Cow position: chr11:11752975-11752340 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 174

Conread position: 3-170
Cow position: chr11:18920077-18919913 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 3-174
Cow position: chr11:10851610-10851788 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 166

Conread position: 3-174
Cow position: chr11:19216396-19216218 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 27, 33

Conread position: 3-174
Cow position: chr11:49099155-49098976 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 167

Conread position: 3-174
Cow position: chr11:52379903-52379729 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 36

Conread position: 3-174
Cow position: chr11:58140186-58140363 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 165

Conread position: 3-174
Cow position: chr11:70248395-70248570 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 156

Conread position: 3-174
Cow position: chr11:84199136-84198958 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 166

Conread position: 3-176
Cow position: chr11:67295501-67295322 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 165

Conread position: 3-217
Cow position: chr11:34841645-34841432 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 166

Conread position: 3-249
Cow position: chr11:15501225-15500979 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 166

Conread position: 3-249
Cow position: chr11:26550965-26551207 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 166

Conread position: 3-249
Cow position: chr11:38843110-38843356 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 111

Conread position: 3-249
Cow position: chr11:54178991-54178745 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 58, 166

Conread position: 3-249
Cow position: chr11:74564318-74564072 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 168

Conread position: 3-250
Cow position: chr11:393601-393846 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 165

Conread position: 3-269
Cow position: chr11:44893384-44893121 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 27, 33

Conread position: 3-271
Cow position: chr11:14259469-14259205 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 166

Conread position: 3-271
Cow position: chr11:18537704-18537437 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 33

Conread position: 3-271
Cow position: chr11:23883826-23884093 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 166

Conread position: 3-271
Cow position: chr11:33601141-33600874 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 166

Conread position: 3-271
Cow position: chr11:35737866-35737596 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 58, 166

Conread position: 3-271
Cow position: chr11:41167198-41166928 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 166

Conread position: 3-271
Cow position: chr11:44153587-44153320 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 166

Conread position: 3-271
Cow position: chr11:53428337-53428068 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 168

Conread position: 3-271
Cow position: chr11:56463858-56464125 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 167

Conread position: 3-271
Cow position: chr11:71332992-71333258 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 166

Conread position: 3-273
Cow position: chr11:21631654-21631927 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 162

Conread position: 3-274
Cow position: chr11:8563603-8563333 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 166

Conread position: 3-282
Cow position: chr11:5481950-5481674 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 165

Conread position: 3-282
Cow position: chr11:26121445-26121166 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 166

Conread position: 3-282
Cow position: chr11:48692939-48693214 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 36

Conread position: 3-282
Cow position: chr11:60999045-60998767 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 52, 83

Conread position: 3-282
Cow position: chr11:63860149-63859872 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 166

Conread position: 3-282
Cow position: chr11:80591836-80592113 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 166

Conread position: 3-284
Cow position: chr11:84628400-84628125 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 47

Conread position: 3-315
Cow position: chr11:49522489-49522807 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 166

Conread position: 3-396
Cow position: chr11:31930223-31930640 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 269
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 405

Conread position: 3-401
Cow position: chr11:26327931-26327540 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 270
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 109

Conread position: 3-404
Cow position: chr11:51207974-51208379 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 272
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 206, 80

Conread position: 3-408
Cow position: chr11:9432869-9433282 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 277
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 55, 149

Conread position: 3-410
Cow position: chr11:45677655-45678070 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 282
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 121

Conread position: 3-426
Cow position: chr11:3238797-3239234 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 290
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 101

Conread position: 3-453
Cow position: chr11:47846486-47846950 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 33

Conread position: 3-456
Cow position: chr11:52516158-52516612 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 291
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 160

Conread position: 3-457
Cow position: chr11:7719014-7718558 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 299
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 165

Conread position: 3-460
Cow position: chr11:16251709-16251228 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 31

Conread position: 3-463
Cow position: chr11:67746828-67747304 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 162

Conread position: 3-464
Cow position: chr11:9388830-9389302 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 316
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 52, 166

Conread position: 3-464
Cow position: chr11:52127506-52127038 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 302
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 32

Conread position: 3-464
Cow position: chr11:58973292-58972821 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 322
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 33

Conread position: 3-464
Cow position: chr11:68130882-68131357 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 309
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 167

Conread position: 3-474
Cow position: chr11:33686998-33686528 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 309
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 89

Conread position: 3-478
Cow position: chr11:18389312-18388840 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 335
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 71

Conread position: 3-481
Cow position: chr11:50197897-50197391 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 359
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 42, 78

Conread position: 3-521
Cow position: chr11:47595860-47596379 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 322
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 58, 146

Conread position: 4-150
Cow position: chr11:56751832-56751673 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 4-249
Cow position: chr11:12353395-12353151 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 58, 164

Conread position: 4-252
Cow position: chr11:50191669-50191420 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 83

Conread position: 4-282
Cow position: chr11:12316539-12316263 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 51, 156

Conread position: 4-282
Cow position: chr11:17980956-17981234 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 165

Conread position: 4-447
Cow position: chr11:30110504-30110965 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 217

Conread position: 4-461
Cow position: chr11:53778164-53778633 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 5-178
Cow position: chr11:17514642-17514825 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 5-250
Cow position: chr11:19592581-19592340 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 162

Conread position: 5-250
Cow position: chr11:27923334-27923579 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 165

Conread position: 5-250
Cow position: chr11:27925375-27925620 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 165

Conread position: 5-271
Cow position: chr11:12177710-12177444 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 165

Conread position: 5-282
Cow position: chr11:56021858-56022133 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 164

Conread position: 5-282
Cow position: chr11:74746318-74746593 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 24

Conread position: 5-285
Cow position: chr11:40772147-40771869 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 41, 29

Conread position: 5-315
Cow position: chr11:35981871-35981559 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 19

Conread position: 5-346
Cow position: chr11:22504778-22505147 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 95

Conread position: 5-379
Cow position: chr11:54856183-54856563 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 166

Conread position: 5-384
Cow position: chr11:37278637-37278271 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 260
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 306, 37

Conread position: 5-417
Cow position: chr11:40467573-40467145 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 53, 96

Conread position: 5-461
Cow position: chr11:1380243-1380692 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 302
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 53, 158

Conread position: 5-464
Cow position: chr11:21856509-21856983 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 321
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 149

Conread position: 5-464
Cow position: chr11:30191712-30192199 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 164

Conread position: 5-468
Cow position: chr11:1486321-1485851 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 326
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 165

Conread position: 5-598
Cow position: chr11:38638669-38639283 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 165

Conread position: 6-166
Cow position: chr11:16795598-16795427 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 6-170
Cow position: chr11:5584596-5584772 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 6-182
Cow position: chr11:42003449-42003264 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 6-282
Cow position: chr11:9235657-9235391 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 43

Conread position: 6-315
Cow position: chr11:2911262-2910954 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 85

Conread position: 6-335
Cow position: chr11:60515415-60515087 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 11

Conread position: 6-349
Cow position: chr11:10294146-10294491 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 165

Conread position: 6-372
Cow position: chr11:31885062-31885447 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 44

Conread position: 6-397
Cow position: chr11:41577455-41577060 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 50, 164

Conread position: 6-443
Cow position: chr11:31900598-31901045 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 164

Conread position: 6-454
Cow position: chr11:4731889-4732352 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 317
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 52, 70

Conread position: 6-460
Cow position: chr11:43430910-43430438 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 258

Conread position: 6-461
Cow position: chr11:33350150-33349684 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 317
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 158

Conread position: 6-461
Cow position: chr11:61202716-61203182 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 315
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 171, 28

Conread position: 6-464
Cow position: chr11:33526617-33527071 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 131

Conread position: 6-464
Cow position: chr11:53147978-53147513 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 42

Conread position: 6-466
Cow position: chr11:46329050-46329521 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 321
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 52, 119

Conread position: 6-498
Cow position: chr11:61454987-61454457 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 364
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 165

Conread position: 6-502
Cow position: chr11:58399820-58400312 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 108

Conread position: 6-530
Cow position: chr11:20601808-20602323 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 39

Conread position: 6-597
Cow position: chr11:39115052-39115656 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 6-603
Cow position: chr11:45632241-45631591 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 421
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 277

Conread position: 6-603
Cow position: chr11:64638964-64638365 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 78

Conread position: 6-609
Cow position: chr11:42358674-42359288 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 28

Conread position: 7-271
Cow position: chr11:43509833-43509570 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 39, 162

Conread position: 7-274
Cow position: chr11:46780570-46780304 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 162

Conread position: 7-282
Cow position: chr11:8212327-8212599 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 115

Conread position: 7-282
Cow position: chr11:30171919-30172195 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 135

Conread position: 7-282
Cow position: chr11:36459366-36459638 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 163

Conread position: 7-315
Cow position: chr11:77749770-77750071 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 202, 75

Conread position: 7-317
Cow position: chr11:40133301-40132982 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 163

Conread position: 7-341
Cow position: chr11:48428639-48428977 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 51

Conread position: 7-438
Cow position: chr11:55117024-55117458 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 314
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 153

Conread position: 8-159
Cow position: chr11:25164955-25165114 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 8-163
Cow position: chr11:17228095-17227946 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 8-235
Cow position: chr11:40609204-40608965 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 133

Conread position: 8-248
Cow position: chr11:4052677-4052436 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 160

Conread position: 8-271
Cow position: chr11:11489738-11489476 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 161

Conread position: 8-271
Cow position: chr11:64082073-64082335 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 22, 28

Conread position: 8-282
Cow position: chr11:54216384-54216654 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 161

Conread position: 8-329
Cow position: chr11:62376885-62376555 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 47, 153

Conread position: 8-372
Cow position: chr11:1625666-1625295 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 160

Conread position: 8-432
Cow position: chr11:3703872-3704292 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 283
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 161

Conread position: 8-454
Cow position: chr11:37068744-37068307 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 302
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 38

Conread position: 8-459
Cow position: chr11:49211269-49210825 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 289
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 40

Conread position: 8-498
Cow position: chr11:48271752-48272260 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 84

Conread position: 8-530
Cow position: chr11:23129000-23128443 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 255

Conread position: 8-533
Cow position: chr11:3393658-3393120 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 77

Conread position: 8-533
Cow position: chr11:17831681-17831121 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 365
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 148

Conread position: 8-598
Cow position: chr11:19890436-19891020 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 128

Conread position: 8-608
Cow position: chr11:64043801-64044411 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 412
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 47, 137

Conread position: 9-170
Cow position: chr11:21728676-21728508 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 160

Conread position: 9-183
Cow position: chr11:56654061-56654244 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 9-222
Cow position: chr11:4406373-4406593 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 163

Conread position: 9-285
Cow position: chr11:11991499-11991774 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 155

Conread position: 9-405
Cow position: chr11:74929332-74929744 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 286
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 161

Conread position: 9-483
Cow position: chr11:75480482-75479979 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 193

Conread position: 9-489
Cow position: chr11:77705317-77705803 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 157

Conread position: 9-597
Cow position: chr11:44031551-44032189 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 161

Conread position: 9-597
Cow position: chr11:63469440-63470041 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 73

Conread position: 10-271
Cow position: chr11:60945544-60945804 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 26

Conread position: 10-490
Cow position: chr11:7873715-7874190 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 328
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 159

Conread position: 10-595
Cow position: chr11:44637207-44636599 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 159

Conread position: 11-161
Cow position: chr11:8246683-8246842 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 11-211
Cow position: chr11:54307868-54307668 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 25

Conread position: 11-282
Cow position: chr11:63149870-63149602 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 157

Conread position: 11-390
Cow position: chr11:6156991-6156606 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 157

Conread position: 11-598
Cow position: chr11:13040620-13040004 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 210

Conread position: 14-402
Cow position: chr11:81067024-81066625 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 47, 155

Conread position: 14-456
Cow position: chr11:47573017-47572560 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 305
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 16, 22

Conread position: 14-460
Cow position: chr11:76114211-76114662 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 36

Conread position: 15-271
Cow position: chr11:42411066-42411321 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 21

Conread position: 16-489
Cow position: chr11:44233926-44234406 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 324
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 236, 35

Conread position: 17-285
Cow position: chr11:25744883-25745144 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 146

Conread position: 17-459
Cow position: chr11:32076581-32076124 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 308
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 152

Conread position: 19-426
Cow position: chr11:74389574-74389988 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 249
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 184, 142

Conread position: 19-498
Cow position: chr11:8428059-8428571 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 335
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 96, 46

Conread position: 20-462
Cow position: chr11:70530124-70529665 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 302
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 16

Conread position: 20-485
Cow position: chr11:48672273-48672759 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 322
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 148

Conread position: 21-428
Cow position: chr11:49105624-49106041 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 290
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 26

Conread position: 22-530
Cow position: chr11:26483302-26483802 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 342
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 253, 28

Conread position: 24-603
Cow position: chr11:49152516-49153129 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 174

Conread position: 34-167
Cow position: chr11:24438654-24438519 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 130

Conread position: 35-402
Cow position: chr11:6594661-6594290 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 173, 126

Conread position: 35-460
Cow position: chr11:18210782-18210332 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 307
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 22, 15

Conread position: 37-529
Cow position: chr11:65970039-65970551 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 129

Conread position: 40-449
Cow position: chr11:81605229-81605633 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 246, 120

Conread position: 43-271
Cow position: chr11:37118080-37118298 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 166, 5

Conread position: 44-601
Cow position: chr11:40486327-40485791 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 45-166
Cow position: chr11:15062063-15062183 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 45-585
Cow position: chr11:19238559-19238016 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 11

Conread position: 48-271
Cow position: chr11:44255616-44255833 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 116

Conread position: 48-390
Cow position: chr11:10302602-10302243 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 246
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 58

Conread position: 48-408
Cow position: chr11:53142634-53142253 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 15

Conread position: 48-429
Cow position: chr11:8232962-8232582 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 115

Conread position: 48-456
Cow position: chr11:7334116-7333708 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 13

Conread position: 48-471
Cow position: chr11:3303436-3303848 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 161, 113

Conread position: 48-546
Cow position: chr11:44642681-44642180 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 87

Conread position: 49-168
Cow position: chr11:77757119-77757000 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 49-404
Cow position: chr11:13690697-13690343 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 9, 115

Conread position: 50-282
Cow position: chr11:69443552-69443329 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 12, 111

Conread position: 50-491
Cow position: chr11:25386671-25387111 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 296
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 112

Conread position: 51-268
Cow position: chr11:65219626-65219837 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 51-271
Cow position: chr11:27907159-27907366 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 152, 55

Conread position: 51-405
Cow position: chr11:39831594-39831248 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 208, 104

Conread position: 51-464
Cow position: chr11:57269284-57269700 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 283
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 9, 111

Conread position: 51-515
Cow position: chr11:58990113-58990574 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 110

Conread position: 52-271
Cow position: chr11:13205999-13205791 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 53-282
Cow position: chr11:49873030-49873250 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 151, 107

Conread position: 53-314
Cow position: chr11:67345462-67345188 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 107, 76

Conread position: 54-282
Cow position: chr11:68632090-68631871 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 108

Conread position: 55-183
Cow position: chr11:40293028-40292899 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 55-229
Cow position: chr11:80826733-80826571 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 155, 106

Conread position: 55-251
Cow position: chr11:5527252-5527062 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 165, 107

Conread position: 55-269
Cow position: chr11:3946937-3946733 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 163, 8

Conread position: 55-327
Cow position: chr11:32067425-32067158 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 109

Conread position: 55-384
Cow position: chr11:3769680-3769349 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 214, 95

Conread position: 55-427
Cow position: chr11:21819846-21819458 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 17, 127

Conread position: 55-428
Cow position: chr11:48901463-48901098 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 214, 106

Conread position: 55-601
Cow position: chr11:63508045-63508578 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 107

Conread position: 56-158
Cow position: chr11:15125354-15125252 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 56-158
Cow position: chr11:34120592-34120694 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chr11:172361-172259 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 56-159
Cow position: chr11:2281884-2281781 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chr11:8413398-8413501 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chr11:16000004-16000107 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chr11:45898772-45898669 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 56-160
Cow position: chr11:2394412-2394308 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 56-163
Cow position: chr11:2962767-2962872 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 56-164
Cow position: chr11:48982676-48982784 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 56-164
Cow position: chr11:53690803-53690911 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 56-166
Cow position: chr11:63518580-63518689 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 56-168
Cow position: chr11:55761400-55761512 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 56-170
Cow position: chr11:62016813-62016696 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 56-174
Cow position: chr11:872472-872588 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 56-178
Cow position: chr11:4610449-4610328 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 56-182
Cow position: chr11:84531726-84531599 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 56-183
Cow position: chr11:20491134-20491263 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 56-195
Cow position: chr11:40395656-40395795 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 119

Conread position: 56-195
Cow position: chr11:50950533-50950671 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 56-249
Cow position: chr11:78480407-78480589 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 147, 40

Conread position: 56-250
Cow position: chr11:6723651-6723466 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 21, 107

Conread position: 56-250
Cow position: chr11:9731308-9731122 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 147, 94

Conread position: 56-250
Cow position: chr11:18117896-18118081 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 56-250
Cow position: chr11:44514806-44514620 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 147, 105

Conread position: 56-250
Cow position: chr11:66943350-66943165 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 152, 105

Conread position: 56-250
Cow position: chr11:67600355-67600561 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 105, 0

Conread position: 56-250
Cow position: chr11:80555869-80556052 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 153, 60

Conread position: 56-257
Cow position: chr11:81454803-81454603 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 78

Conread position: 56-262
Cow position: chr11:28382218-28382432 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 211

Conread position: 56-268
Cow position: chr11:21499222-21499428 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 21

Conread position: 56-269
Cow position: chr11:23739528-23739300 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 18, 216

Conread position: 56-269
Cow position: chr11:36237867-36237664 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 56-269
Cow position: chr11:48484515-48484312 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 56-269
Cow position: chr11:76961144-76961353 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 123

Conread position: 56-271
Cow position: chr11:3681288-3681085 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 56-271
Cow position: chr11:3797017-3797223 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 148, 105

Conread position: 56-271
Cow position: chr11:9812105-9812314 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 98

Conread position: 56-271
Cow position: chr11:11534289-11534090 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 56-271
Cow position: chr11:20544359-20544564 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 153, 105

Conread position: 56-271
Cow position: chr11:23425239-23425033 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 147, 105

Conread position: 56-271
Cow position: chr11:27605117-27605323 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 147, 105

Conread position: 56-271
Cow position: chr11:28106386-28106180 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 147, 105

Conread position: 56-271
Cow position: chr11:75195586-75195380 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 153, 105

Conread position: 56-271
Cow position: chr11:77031758-77031540 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 120, 105

Conread position: 56-274
Cow position: chr11:8582319-8582108 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 153, 105

Conread position: 56-274
Cow position: chr11:14426043-14425834 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 153, 105

Conread position: 56-274
Cow position: chr11:55347873-55348079 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 147, 97

Conread position: 56-277
Cow position: chr11:31574257-31574467 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 14

Conread position: 56-282
Cow position: chr11:5418653-5418442 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 56-282
Cow position: chr11:8564367-8564151 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 153, 105

Conread position: 56-282
Cow position: chr11:28843066-28843279 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 105, 119

Conread position: 56-282
Cow position: chr11:30448246-30448462 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 153, 105

Conread position: 56-282
Cow position: chr11:31837091-31837305 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 219, 95

Conread position: 56-282
Cow position: chr11:43593600-43593816 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 148, 105

Conread position: 56-282
Cow position: chr11:48167321-48167106 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 56-282
Cow position: chr11:62821726-62821510 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 148, 105

Conread position: 56-282
Cow position: chr11:68327445-68327227 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 153, 101

Conread position: 56-282
Cow position: chr11:72314155-72314369 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 153, 17

Conread position: 56-282
Cow position: chr11:77764128-77763909 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 147, 102

Conread position: 56-285
Cow position: chr11:7683442-7683658 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 153, 51

Conread position: 56-285
Cow position: chr11:80923727-80923509 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 22

Conread position: 56-286
Cow position: chr11:41102532-41102759 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 12

Conread position: 56-315
Cow position: chr11:26638404-26638654 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 105

Conread position: 56-317
Cow position: chr11:30701328-30701591 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 153, 105

Conread position: 56-323
Cow position: chr11:12010667-12010937 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 147, 70

Conread position: 56-327
Cow position: chr11:21886928-21886658 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 219, 104

Conread position: 56-347
Cow position: chr11:50134548-50134249 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 21

Conread position: 56-349
Cow position: chr11:35920170-35919875 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 70

Conread position: 56-369
Cow position: chr11:79019925-79019597 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 76, 33

Conread position: 56-379
Cow position: chr11:43524231-43524555 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 147, 17

Conread position: 56-381
Cow position: chr11:35363104-35363436 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 194, 54

Conread position: 56-381
Cow position: chr11:70163492-70163842 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 46

Conread position: 56-390
Cow position: chr11:61846398-61846054 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 150, 104

Conread position: 56-391
Cow position: chr11:70522234-70521879 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 105, 209

Conread position: 56-397
Cow position: chr11:4474868-4474522 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 153, 105

Conread position: 56-404
Cow position: chr11:65495720-65495365 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 154, 105

Conread position: 56-416
Cow position: chr11:6325541-6325187 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 236
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 153, 105

Conread position: 56-422
Cow position: chr11:9871362-9871725 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 210, 73

Conread position: 56-423
Cow position: chr11:46247052-46247434 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 106

Conread position: 56-428
Cow position: chr11:77240969-77241354 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 103, 158

Conread position: 56-429
Cow position: chr11:62750142-62749771 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 105

Conread position: 56-437
Cow position: chr11:60823124-60822737 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 66

Conread position: 56-445
Cow position: chr11:85764567-85764936 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 148, 77

Conread position: 56-448
Cow position: chr11:56797121-56796736 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 80

Conread position: 56-453
Cow position: chr11:32030700-32031103 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 275
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 147, 105

Conread position: 56-454
Cow position: chr11:4412412-4412012 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 273
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 203, 105

Conread position: 56-454
Cow position: chr11:18766053-18765649 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 271
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 145, 105

Conread position: 56-455
Cow position: chr11:70745929-70745526 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 286
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 103

Conread position: 56-457
Cow position: chr11:67940291-67940699 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 165

Conread position: 56-458
Cow position: chr11:38599167-38598758 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 269
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 147, 105

Conread position: 56-458
Cow position: chr11:43375749-43375344 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 275
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 147, 105

Conread position: 56-459
Cow position: chr11:26535373-26535789 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 278
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 103

Conread position: 56-460
Cow position: chr11:2309480-2309889 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 99

Conread position: 56-460
Cow position: chr11:29004046-29004449 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 284
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 153, 105

Conread position: 56-460
Cow position: chr11:46746243-46746647 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 42

Conread position: 56-461
Cow position: chr11:17860546-17860139 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 105

Conread position: 56-461
Cow position: chr11:36986579-36986966 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 154, 54

Conread position: 56-461
Cow position: chr11:64029648-64029246 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 105

Conread position: 56-461
Cow position: chr11:80788303-80787890 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 147, 102

Conread position: 56-463
Cow position: chr11:83196109-83196517 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 219, 105

Conread position: 56-464
Cow position: chr11:4734786-4735201 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 283
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 147, 105

Conread position: 56-464
Cow position: chr11:5895346-5894931 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 278
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 147, 105

Conread position: 56-464
Cow position: chr11:26254343-26254757 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 283
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 147, 105

Conread position: 56-464
Cow position: chr11:28848369-28847959 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 288
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 154, 105

Conread position: 56-464
Cow position: chr11:36309802-36309393 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 284
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 153, 99

Conread position: 56-464
Cow position: chr11:38021399-38020984 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 275
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 147, 105

Conread position: 56-464
Cow position: chr11:41161940-41161525 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 278
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 147, 105

Conread position: 56-464
Cow position: chr11:41269825-41269410 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 276
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 147, 105

Conread position: 56-464
Cow position: chr11:48109467-48109881 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 271
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 147, 105

Conread position: 56-464
Cow position: chr11:67346036-67345636 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 278
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 148, 30

Conread position: 56-464
Cow position: chr11:81576142-81575731 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 278
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 153, 40

Conread position: 56-465
Cow position: chr11:59872534-59872951 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 106

Conread position: 56-467
Cow position: chr11:81174498-81174911 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 105

Conread position: 56-469
Cow position: chr11:67294022-67293616 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 269
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 105, 120

Conread position: 56-474
Cow position: chr11:21798563-21798963 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 70

Conread position: 56-480
Cow position: chr11:43644494-43644064 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 107

Conread position: 56-490
Cow position: chr11:27939094-27939535 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 301
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 153, 105

Conread position: 56-497
Cow position: chr11:44244497-44244054 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 278
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 79, 132

Conread position: 56-497
Cow position: chr11:62881038-62880573 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 323
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 191

Conread position: 56-498
Cow position: chr11:33754311-33753849 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 211

Conread position: 56-499
Cow position: chr11:44576131-44575684 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 305
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 148, 93

Conread position: 56-502
Cow position: chr11:55744081-55744531 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 313
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 148, 105

Conread position: 56-514
Cow position: chr11:7394764-7395210 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 73

Conread position: 56-516
Cow position: chr11:81162847-81162355 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 333
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 98, 155

Conread position: 56-521
Cow position: chr11:1849555-1849088 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 323
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 201, 89

Conread position: 56-528
Cow position: chr11:65694229-65693763 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 341
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 68, 104

Conread position: 56-529
Cow position: chr11:46474084-46473599 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 105

Conread position: 56-533
Cow position: chr11:17279049-17278576 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 327
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 223, 69

Conread position: 56-533
Cow position: chr11:18086730-18086258 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 104

Conread position: 56-533
Cow position: chr11:30708100-30708603 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 56-533
Cow position: chr11:48650378-48650887 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 168

Conread position: 56-536
Cow position: chr11:7924977-7924491 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 341
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 215, 83

Conread position: 56-536
Cow position: chr11:17321269-17321741 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 326
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 201, 99

Conread position: 56-546
Cow position: chr11:76606297-76606774 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 213, 105

Conread position: 56-553
Cow position: chr11:46413178-46413694 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 135

Conread position: 56-564
Cow position: chr11:65409550-65409021 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 361
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 150, 18

Conread position: 56-567
Cow position: chr11:59702092-59702614 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 351
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 180, 104

Conread position: 56-572
Cow position: chr11:9222132-9221594 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 47

Conread position: 56-577
Cow position: chr11:14941996-14941467 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 283

Conread position: 56-586
Cow position: chr11:67744941-67745463 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 15

Conread position: 56-593
Cow position: chr11:47566346-47565779 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 105

Conread position: 56-596
Cow position: chr11:5648350-5648901 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 281

Conread position: 56-596
Cow position: chr11:8841135-8840600 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 104

Conread position: 56-596
Cow position: chr11:27681109-27681663 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 27

Conread position: 56-596
Cow position: chr11:67246417-67246930 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 350
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 277, 60

Conread position: 56-597
Cow position: chr11:46579953-46580531 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 233

Conread position: 56-597
Cow position: chr11:61427222-61427751 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 106

Conread position: 56-598
Cow position: chr11:15467076-15467630 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 373
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 72, 40

Conread position: 56-598
Cow position: chr11:16233304-16232770 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 84

Conread position: 56-598
Cow position: chr11:51389940-51389391 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 370
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 119, 68

Conread position: 56-602
Cow position: chr11:43526548-43525953 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 13

Conread position: 56-602
Cow position: chr11:70399447-70400010 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 81

Conread position: 56-603
Cow position: chr11:38380762-38381313 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 373
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 155, 47

Conread position: 56-603
Cow position: chr11:47125179-47125713 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 106

Conread position: 56-607
Cow position: chr11:65987823-65988394 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 69

Conread position: 56-608
Cow position: chr11:42083091-42083647 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 106

Conread position: 56-609
Cow position: chr11:24967074-24967615 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 12

Conread position: 57-159
Cow position: chr11:20422872-20422771 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 57-177
Cow position: chr11:4625207-4625083 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 111

Conread position: 57-229
Cow position: chr11:17508775-17508939 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 152, 104

Conread position: 57-233
Cow position: chr11:10364796-10364632 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 171, 104

Conread position: 57-268
Cow position: chr11:18890880-18891090 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 104, 23

Conread position: 57-271
Cow position: chr11:31138788-31138583 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 152, 104

Conread position: 57-271
Cow position: chr11:62710263-62710057 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 147, 105

Conread position: 57-282
Cow position: chr11:36474910-36475122 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 57-315
Cow position: chr11:697560-697299 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 129, 40

Conread position: 57-349
Cow position: chr11:2568415-2568721 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 104, 200

Conread position: 57-349
Cow position: chr11:22103371-22103656 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 166, 104

Conread position: 57-458
Cow position: chr11:75222499-75222905 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 275
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 106

Conread position: 57-458
Cow position: chr11:77179489-77179079 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 272
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 106

Conread position: 57-466
Cow position: chr11:23251995-23251568 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 302
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 147, 102

Conread position: 57-479
Cow position: chr11:42232221-42232645 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 103

Conread position: 57-495
Cow position: chr11:3833739-3833306 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 104

Conread position: 57-498
Cow position: chr11:7589801-7590248 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 61

Conread position: 57-498
Cow position: chr11:34112872-34113325 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 226

Conread position: 57-503
Cow position: chr11:35252378-35251930 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 303
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 152, 77

Conread position: 57-598
Cow position: chr11:38794152-38794696 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 142

Conread position: 58-269
Cow position: chr11:25855710-25855926 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 48

Conread position: 58-282
Cow position: chr11:21437239-21437451 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 58-315
Cow position: chr11:39644890-39645152 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 21

Conread position: 58-480
Cow position: chr11:27386730-27386299 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 153, 103

Conread position: 58-490
Cow position: chr11:43897745-43898190 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 306
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 100

Conread position: 58-490
Cow position: chr11:73512809-73512391 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 15

Conread position: 58-602
Cow position: chr11:58587952-58588514 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 105

Conread position: 59-427
Cow position: chr11:71846738-71846363 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 273
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 147, 104

Conread position: 59-453
Cow position: chr11:18097958-18097557 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 269
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 144, 91

Conread position: 59-464
Cow position: chr11:4031954-4031549 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 269
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 150, 91

Conread position: 60-250
Cow position: chr11:66230956-66231138 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 101

Conread position: 61-393
Cow position: chr11:34467223-34467536 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 122, 15

Conread position: 62-285
Cow position: chr11:37974541-37974754 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 148, 11

Conread position: 62-327
Cow position: chr11:61137584-61137327 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 44

Conread position: 62-456
Cow position: chr11:66529970-66529569 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 270
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 141, 88

Conread position: 62-461
Cow position: chr11:45282550-45282945 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 142, 93

Conread position: 62-498
Cow position: chr11:31352957-31352492 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 323
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 208, 90

Conread position: 63-299
Cow position: chr11:4305083-4305310 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 149, 98

Conread position: 63-461
Cow position: chr11:15503717-15504129 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 282
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 140, 10

Conread position: 64-443
Cow position: chr11:47586731-47586351 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 272
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 188, 73

Conread position: 64-463
Cow position: chr11:5032161-5031756 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 97

Conread position: 64-469
Cow position: chr11:68207232-68206819 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 290
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 13

Conread position: 66-271
Cow position: chr11:35059171-35058975 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 95

Conread position: 66-458
Cow position: chr11:60778149-60778548 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 270
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 137, 95

Conread position: 68-271
Cow position: chr11:10872133-10872327 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 93

Conread position: 69-453
Cow position: chr11:56051375-56051766 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 267
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 134, 92

Conread position: 69-464
Cow position: chr11:61195296-61195708 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 269
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 106

Conread position: 69-584
Cow position: chr11:57047342-57046832 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 264
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 188, 86

Conread position: 70-173
Cow position: chr11:79729343-79729241 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 70-593
Cow position: chr11:29802931-29802435 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 10

Conread position: 73-251
Cow position: chr11:2821160-2821328 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 75-597
Cow position: chr11:30354689-30355228 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 346
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 229, 49

Conread position: 76-460
Cow position: chr11:54303135-54303527 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 263
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 127, 85

Conread position: 78-268
Cow position: chr11:7460950-7460770 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 123, 75

Conread position: 78-369
Cow position: chr11:10875652-10875952 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 82

Conread position: 78-453
Cow position: chr11:12372667-12373049 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 260
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 125, 83

Conread position: 79-269
Cow position: chr11:3266001-3266193 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 101

Conread position: 79-458
Cow position: chr11:18140872-18141269 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 274
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 190, 82

Conread position: 79-597
Cow position: chr11:62490065-62490604 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 361
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 129, 33

Conread position: 81-498
Cow position: chr11:60470567-60470138 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 302
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 58

Conread position: 83-269
Cow position: chr11:18912898-18913074 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 92

Conread position: 83-455
Cow position: chr11:73478258-73478619 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 188, 79

Conread position: 84-282
Cow position: chr11:31437363-31437175 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 119, 77

Conread position: 85-274
Cow position: chr11:11681486-11681300 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 85-415
Cow position: chr11:46398759-46399097 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 186, 72

Conread position: 85-428
Cow position: chr11:64932661-64932309 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 172, 75

Conread position: 86-269
Cow position: chr11:11594776-11594957 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 86-282
Cow position: chr11:71705765-71705580 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 86-461
Cow position: chr11:16910731-16910342 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 264
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 131, 75

Conread position: 86-558
Cow position: chr11:38235875-38236376 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 338
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 134, 74

Conread position: 87-280
Cow position: chr11:37563100-37563289 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 123, 74

Conread position: 88-453
Cow position: chr11:53130455-53130822 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 261
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 181, 65

Conread position: 89-309
Cow position: chr11:21842149-21841921 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 63, 98

Conread position: 91-461
Cow position: chr11:4323009-4323375 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 112, 71

Conread position: 91-598
Cow position: chr11:865939-866464 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 337
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 70

Conread position: 93-363
Cow position: chr11:34615913-34616190 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 68

Conread position: 93-460
Cow position: chr11:54333977-54334344 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 68

Conread position: 95-460
Cow position: chr11:49216439-49216801 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 176, 60

Conread position: 100-477
Cow position: chr11:41812260-41811878 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 269
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 103, 61

Conread position: 106-389
Cow position: chr11:4435978-4436272 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 149

Conread position: 106-472
Cow position: chr11:955022-955396 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 245
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 55

Conread position: 109-472
Cow position: chr11:22978202-22977845 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 166, 52

Conread position: 109-597
Cow position: chr11:53452680-53452186 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 16

Conread position: 110-397
Cow position: chr11:35275957-35276253 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 51

Conread position: 110-473
Cow position: chr11:70619716-70620074 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 94, 55

Conread position: 110-477
Cow position: chr11:48474344-48474738 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 10

Conread position: 110-498
Cow position: chr11:28692088-28691695 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 281
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 161, 36

Conread position: 110-498
Cow position: chr11:39499039-39499416 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 266
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 7

Conread position: 110-528
Cow position: chr11:59463974-59463547 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 278
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 50

Conread position: 111-383
Cow position: chr11:46451281-46451546 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 164, 50

Conread position: 111-433
Cow position: chr11:58459782-58460100 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 95

Conread position: 111-463
Cow position: chr11:59156212-59155856 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 164, 60

Conread position: 111-464
Cow position: chr11:43967546-43967198 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 50

Conread position: 113-243
Cow position: chr11:42162743-42162869 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 114-455
Cow position: chr11:9837437-9837088 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 11, 50

Conread position: 116-591
Cow position: chr11:86926254-86925787 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 324
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 25, 46

Conread position: 117-463
Cow position: chr11:439990-439644 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 44

Conread position: 117-480
Cow position: chr11:73924890-73924526 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 255
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 45

Conread position: 118-425
Cow position: chr11:70383025-70382709 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 139, 44

Conread position: 121-426
Cow position: chr11:43913895-43914197 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 40

Conread position: 122-498
Cow position: chr11:40793027-40792645 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 247
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 214, 39

Conread position: 125-451
Cow position: chr11:68910176-68909839 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 26

Conread position: 125-490
Cow position: chr11:30120986-30120610 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 259
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 144, 35

Conread position: 126-556
Cow position: chr11:9253350-9252906 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 300
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 35

Conread position: 129-532
Cow position: chr11:46002001-46001592 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 278
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 24

Conread position: 129-608
Cow position: chr11:30934100-30934586 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 338
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 80, 34

Conread position: 138-591
Cow position: chr11:56821579-56821085 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 23

Conread position: 150-600
Cow position: chr11:66265297-66265741 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 93

Conread position: 156-344
Cow position: chr11:84531585-84531387 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 99

Conread position: 156-423
Cow position: chr11:34121455-34121744 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 105

Conread position: 156-434
Cow position: chr11:35148867-35149151 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 62

Conread position: 156-443
Cow position: chr11:62965855-62965549 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 104

Conread position: 156-498
Cow position: chr11:20761544-20761902 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 100

Conread position: 156-601
Cow position: chr11:41271837-41272305 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 28

Conread position: 156-603
Cow position: chr11:18484461-18484012 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 104

Conread position: 157-468
Cow position: chr11:49148749-49149063 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 156, 101

Conread position: 157-608
Cow position: chr11:43646719-43646237 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 186

Conread position: 163-396
Cow position: chr11:60512491-60512739 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 95

Conread position: 163-522
Cow position: chr11:8148178-8147810 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 253
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 133, 46

Conread position: 164-429
Cow position: chr11:78990267-78989994 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 95

Conread position: 164-460
Cow position: chr11:5221710-5221418 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 32

Conread position: 164-460
Cow position: chr11:10620619-10620312 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 92

Conread position: 164-512
Cow position: chr11:3282765-3283097 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 100

Conread position: 164-529
Cow position: chr11:80012125-80011753 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 45

Conread position: 164-533
Cow position: chr11:21844426-21844039 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 260
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 44

Conread position: 164-592
Cow position: chr11:1668381-1668824 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 100

Conread position: 164-601
Cow position: chr11:8828922-8828465 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 90

Conread position: 164-601
Cow position: chr11:20491280-20491731 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 45

Conread position: 164-601
Cow position: chr11:48982820-48983282 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 319
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 40, 97

Conread position: 164-604
Cow position: chr11:42519451-42519902 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 37

Conread position: 164-612
Cow position: chr11:14308345-14308812 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 165

Conread position: 165-532
Cow position: chr11:65445123-65444749 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 94

Conread position: 167-415
Cow position: chr11:49097000-49096756 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 85

Conread position: 167-477
Cow position: chr11:2788089-2788430 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 90

Conread position: 167-526
Cow position: chr11:11125372-11125751 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 94

Conread position: 167-597
Cow position: chr11:46705813-46705376 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 73

Conread position: 169-460
Cow position: chr11:70459286-70459579 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 125

Conread position: 170-460
Cow position: chr11:1071379-1071075 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 89

Conread position: 170-498
Cow position: chr11:65827019-65826691 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 82

Conread position: 172-436
Cow position: chr11:83066210-83066489 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 78

Conread position: 172-460
Cow position: chr11:36182403-36182706 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 80

Conread position: 172-461
Cow position: chr11:85723416-85723714 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 83

Conread position: 172-463
Cow position: chr11:8988515-8988211 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 80

Conread position: 172-479
Cow position: chr11:30720812-30721137 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 85

Conread position: 172-532
Cow position: chr11:80530085-80530457 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 91

Conread position: 172-601
Cow position: chr11:34962777-34963238 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 306
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 85, 401

Conread position: 172-609
Cow position: chr11:62019884-62019410 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 317
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 87

Conread position: 173-461
Cow position: chr11:36981283-36981580 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 84

Conread position: 173-545
Cow position: chr11:40258682-40258302 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 102, 36

Conread position: 174-461
Cow position: chr11:23232796-23232498 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 10

Conread position: 174-545
Cow position: chr11:56892536-56892927 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 85

Conread position: 175-460
Cow position: chr11:21549213-21549496 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 82

Conread position: 176-389
Cow position: chr11:63518732-63518957 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 82

Conread position: 176-591
Cow position: chr11:55761598-55762033 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 302
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 92, 75

Conread position: 177-532
Cow position: chr11:25332009-25331646 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 83

Conread position: 177-582
Cow position: chr11:50951270-50951703 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 83

Conread position: 177-603
Cow position: chr11:83043641-83043178 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 293
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 75

Conread position: 178-506
Cow position: chr11:33103915-33103590 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 66

Conread position: 178-585
Cow position: chr11:73354335-73353896 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 289
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 224

Conread position: 178-598
Cow position: chr11:18572524-18572967 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 302
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 155

Conread position: 178-598
Cow position: chr11:18698595-18699054 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 159

Conread position: 179-436
Cow position: chr11:77207770-77208034 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 73

Conread position: 179-461
Cow position: chr11:41986322-41986029 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 94

Conread position: 179-477
Cow position: chr11:32377909-32378222 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 81

Conread position: 179-593
Cow position: chr11:12111746-12111297 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 293
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 83

Conread position: 180-392
Cow position: chr11:13039407-13039195 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 98, 29

Conread position: 180-486
Cow position: chr11:51044214-51043887 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 29, 80

Conread position: 180-498
Cow position: chr11:6234156-6233820 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 73

Conread position: 180-598
Cow position: chr11:84795999-84795588 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 302
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 24, 59

Conread position: 180-609
Cow position: chr11:53262493-53262931 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 308
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 57

Conread position: 181-598
Cow position: chr11:48697171-48697582 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 294
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 90

Conread position: 182-460
Cow position: chr11:36799573-36799291 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 29

Conread position: 184-409
Cow position: chr11:15125253-15125012 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 71

Conread position: 184-443
Cow position: chr11:8105509-8105784 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 20, 68

Conread position: 184-443
Cow position: chr11:62016543-62016282 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 67

Conread position: 184-461
Cow position: chr11:47351080-47351357 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 85

Conread position: 184-469
Cow position: chr11:62738942-62739247 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 75

Conread position: 184-498
Cow position: chr11:68422807-68423122 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 231
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 20, 76

Conread position: 184-598
Cow position: chr11:16000655-16001090 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 13

Conread position: 184-602
Cow position: chr11:76395505-76395920 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 294
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 75

Conread position: 184-608
Cow position: chr11:17227913-17227459 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 299
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 73

Conread position: 186-497
Cow position: chr11:19247467-19247141 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 75

Conread position: 188-595
Cow position: chr11:83587772-83588182 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 70

Conread position: 189-464
Cow position: chr11:63482694-63482406 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 71

Conread position: 189-467
Cow position: chr11:36496585-36496867 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 21, 67

Conread position: 189-498
Cow position: chr11:44222632-44222945 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 60

Conread position: 189-601
Cow position: chr11:18145073-18144656 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 47

Conread position: 189-603
Cow position: chr11:62574267-62573839 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 60

Conread position: 190-468
Cow position: chr11:30952786-30952489 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 71

Conread position: 190-494
Cow position: chr11:40396060-40396371 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 19

Conread position: 190-607
Cow position: chr11:36659082-36658645 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 290
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 64

Conread position: 192-428
Cow position: chr11:75748170-75748418 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 59

Conread position: 192-460
Cow position: chr11:48932848-48932571 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 84, 68

Conread position: 192-598
Cow position: chr11:32439214-32438788 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 72

Conread position: 192-606
Cow position: chr11:11460232-11460644 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 68

Conread position: 193-458
Cow position: chr11:17192546-17192266 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 66

Conread position: 193-509
Cow position: chr11:52381135-52380801 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 217
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 136

Conread position: 193-521
Cow position: chr11:65159710-65159371 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 58

Conread position: 193-601
Cow position: chr11:44815265-44815671 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 271
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 55

Conread position: 193-603
Cow position: chr11:38845527-38845098 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 74

Conread position: 194-592
Cow position: chr11:32071886-32072301 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 15

Conread position: 195-461
Cow position: chr11:13043403-13043129 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 75, 64

Conread position: 195-609
Cow position: chr11:39808728-39809157 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 16

Conread position: 196-602
Cow position: chr11:36647099-36647515 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 288
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 64

Conread position: 197-382
Cow position: chr11:80824908-80825102 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 52

Conread position: 197-466
Cow position: chr11:30596736-30597019 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 68

Conread position: 197-529
Cow position: chr11:47169262-47168921 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 52

Conread position: 198-608
Cow position: chr11:45889694-45890133 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 62

Conread position: 199-460
Cow position: chr11:24584921-24585197 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 52

Conread position: 200-470
Cow position: chr11:77319167-77319441 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 53

Conread position: 203-545
Cow position: chr11:77128415-77128773 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 72, 48

Conread position: 203-603
Cow position: chr11:19269323-19268922 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 56

Conread position: 203-609
Cow position: chr11:66188575-66188125 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 311
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 57

Conread position: 206-594
Cow position: chr11:64904745-64905157 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 65, 43

Conread position: 208-459
Cow position: chr11:2083899-2084158 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 109, 43

Conread position: 208-602
Cow position: chr11:67236159-67236563 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 51

Conread position: 214-498
Cow position: chr11:82940860-82940565 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 67

Conread position: 214-603
Cow position: chr11:4610077-4609680 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 63, 36

Conread position: 222-443
Cow position: chr11:35668953-35668712 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 37

Conread position: 224-608
Cow position: chr11:33348417-33348005 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 284
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 30

Conread position: 233-460
Cow position: chr11:2811947-2811714 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 26

Conread position: 241-585
Cow position: chr11:71008935-71009278 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 18

Conread position: 247-498
Cow position: chr11:34646387-34646649 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 8

Conread position: 262-603
Cow position: chr11:75874939-75874583 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 14

Conread position: 263-598
Cow position: chr11:31894090-31894436 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 114

Conread position: 267-519
Cow position: chr11:70097106-70097358 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 10

Conread position: 269-603
Cow position: chr11:69402427-69402082 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 8

Conread position: 271-490
Cow position: chr11:63909835-63909615 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 6

Conread position: 274-463
Cow position: chr11:32436156-32436353 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 274-490
Cow position: chr11:72375861-72375631 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 52

Conread position: 274-498
Cow position: chr11:36286526-36286755 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 12

Conread position: 274-498
Cow position: chr11:42044163-42043936 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 89

Conread position: 274-529
Cow position: chr11:2908595-2908860 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 135

Conread position: 274-533
Cow position: chr11:27764980-27765254 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 53

Conread position: 274-602
Cow position: chr11:36112246-36112597 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 120

Conread position: 274-603
Cow position: chr11:9270903-9270549 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 45

Conread position: 274-603
Cow position: chr11:52832881-52832557 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 18

Conread position: 274-603
Cow position: chr11:77682991-77683341 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 170

Conread position: 274-608
Cow position: chr11:9083301-9083639 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 18

Conread position: 277-460
Cow position: chr11:38874576-38874386 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 277-567
Cow position: chr11:12950119-12949815 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 271

Conread position: 277-598
Cow position: chr11:55821879-55821553 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 136

Conread position: 280-602
Cow position: chr11:7002105-7001761 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 16, 0

Conread position: 283-607
Cow position: chr11:9368667-9368999 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 23

Conread position: 288-498
Cow position: chr11:16907202-16906991 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 106

Conread position: 288-603
Cow position: chr11:78543775-78544099 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 288

Conread position: 288-608
Cow position: chr11:9874160-9874487 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 94

Conread position: 291-593
Cow position: chr11:51729132-51729453 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 42, 33

Conread position: 301-602
Cow position: chr11:33825037-33824726 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 199
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 23

Conread position: 302-459
Cow position: chr11:8846640-8846478 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 10

Conread position: 306-601
Cow position: chr11:62215327-62215025 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 11

Conread position: 306-607
Cow position: chr11:16540721-16541026 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 106

Conread position: 307-598
Cow position: chr11:23047882-23047600 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 14

Conread position: 310-586
Cow position: chr11:31422594-31422883 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 56

Conread position: 310-601
Cow position: chr11:81518305-81518013 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 87, 11

Conread position: 312-593
Cow position: chr11:37372174-37372470 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 6, 109

Conread position: 312-598
Cow position: chr11:51745221-51745507 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 83

Conread position: 314-533
Cow position: chr11:83033366-83033140 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 82

Conread position: 317-602
Cow position: chr11:696472-696182 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 77, 14

Conread position: 320-603
Cow position: chr11:31506720-31507017 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 17

Conread position: 322-598
Cow position: chr11:28395347-28395640 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 323-601
Cow position: chr11:21398840-21399126 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 20

Conread position: 323-603
Cow position: chr11:26468024-26468316 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 99

Conread position: 324-598
Cow position: chr11:84890841-84890543 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 326-603
Cow position: chr11:67871722-67871434 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 48

Conread position: 327-598
Cow position: chr11:50953685-50953399 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 328-536
Cow position: chr11:21473235-21473021 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 97

Conread position: 328-605
Cow position: chr11:21136697-21136985 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 33

Conread position: 330-597
Cow position: chr11:27722278-27722556 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 71, 41

Conread position: 331-556
Cow position: chr11:72082592-72082826 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 30

Conread position: 334-603
Cow position: chr11:18785980-18785708 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 15

Conread position: 338-572
Cow position: chr11:67174616-67174845 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 126, 58

Conread position: 338-598
Cow position: chr11:38667924-38667665 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 56

Conread position: 338-602
Cow position: chr11:53445671-53445938 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 82

Conread position: 342-609
Cow position: chr11:19259617-19259337 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 343-583
Cow position: chr11:60137593-60137838 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 221

Conread position: 343-599
Cow position: chr11:50937848-50937573 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 28

Conread position: 345-564
Cow position: chr11:24243695-24243925 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 54, 76

Conread position: 349-598
Cow position: chr11:9055864-9056121 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 211

Conread position: 355-579
Cow position: chr11:25112608-25112372 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 355-596
Cow position: chr11:34946161-34945909 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 355-603
Cow position: chr11:54244590-54244842 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 107, 39

Conread position: 356-610
Cow position: chr11:17151586-17151848 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 85

Conread position: 358-534
Cow position: chr11:25756237-25756413 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 10

Conread position: 374-603
Cow position: chr11:1596525-1596293 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 22, 49

Conread position: 377-597
Cow position: chr11:52402396-52402626 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 192

Conread position: 378-596
Cow position: chr11:11785265-11785495 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 16

Conread position: 380-602
Cow position: chr11:19501908-19502136 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 82, 16

Conread position: 395-608
Cow position: chr11:76392065-76391852 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 36

Conread position: 399-603
Cow position: chr11:65958744-65958531 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 64, 26

Conread position: 399-608
Cow position: chr11:40275645-40275425 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 19

Conread position: 399-608
Cow position: chr11:40279137-40278917 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 19

Conread position: 404-601
Cow position: chr11:13306859-13306656 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 407-593
Cow position: chr11:14046113-14045920 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 133

Conread position: 408-606
Cow position: chr11:72869854-72869651 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 181

Conread position: 420-601
Cow position: chr11:19606294-19606479 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 59, 0

Conread position: 421-605
Cow position: chr11:24216118-24216309 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 144

Conread position: 425-602
Cow position: chr11:34642248-34642068 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 158

Conread position: 432-609
Cow position: chr11:44609553-44609735 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 51

Conread position: 444-598
Cow position: chr11:49218343-49218183 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 10

Conread position: 448-603
Cow position: chr11:40269586-40269429 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 16

Conread position: 459-606
Cow position: chr11:22009368-22009214 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 462-602
Cow position: chr11:34136524-34136670 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 466-602
Cow position: chr11:2538703-2538839 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 119, 14

Conread position: 467-603
Cow position: chr11:41323236-41323096 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 69

Conread position: 504-598
Cow position: chr11:84858984-84859078 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.