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Cow genome map

           
Conread name:
           
Ss1.1-Emb1-C0005213_E07.5
        

               
Conread position:
               
1-168
               

               
Cow position:
               
chr16:23058851-23058678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr16:47242518-47242695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr16:42073397-42073064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr16:5108298-5107832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr16:39616310-39616762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr16:13989549-13990008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr16:7010633-7011104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr16:23872087-23871615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr16:4722573-4723053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr16:4058929-4059476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 147
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr16:15370248-15370900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
2-153
               

               
Cow position:
               
chr16:50873744-50873586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
2-157
               

               
Cow position:
               
chr16:2395900-2396063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr16:3596938-3596774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr16:17173329-17173488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr16:39164827-39164991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr16:45703624-45703458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr16:49515689-49515524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr16:33791093-33791259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
2-166
               

               
Cow position:
               
chr16:46654716-46654886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr16:35377-35556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr16:4757103-4757282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr16:8884388-8884567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr16:22849671-22849850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr16:23654345-23654524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr16:29678075-29677896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr16:41904229-41904408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr16:45464824-45464646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 166
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr16:50113254-50113439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 173
               

               
Conread position:
               
2-182
               

               
Cow position:
               
chr16:8000546-8000733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
2-182
               

               
Cow position:
               
chr16:8367589-8367398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 130
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr16:22825085-22824898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr16:6902006-6902215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr16:16681200-16681409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr16:49097060-49097269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr16:3820728-3820974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr16:19340274-19340509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr16:12485204-12484966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr16:41623375-41623613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr16:45107244-45107483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 167
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr16:49449782-49449543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr16:8077086-8076857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
202, 36
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr16:17288355-17288607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr16:7917366-7917612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr16:22124604-22124355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 161
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr16:22320162-22319914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 167
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr16:23528033-23527785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr16:40878730-40878482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr16:44475261-44475013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr16:56589781-56590045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 201
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr16:27706654-27706405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
56, 168
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr16:47248183-47248447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:5345603-5345337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 165
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:7385861-7386129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:11286720-11286988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:15312384-15312652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:17952514-17952782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:26923119-26922854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:27538110-27538378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:28278073-28277808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 140
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:31822296-31822028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:42211592-42211860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:44098078-44097810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:45173983-45173718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:49779854-49779586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:51939319-51939587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr16:52952148-52951880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr16:11523387-11523094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 270
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr16:35342403-35342132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:825566-825848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:13330371-13330094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:14040521-14040795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:14236832-14237110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:15416932-15416667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:26627847-26628125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:28193205-28192927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:28292443-28292721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:31656390-31656668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:33133152-33133429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:33177214-33177491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:37387593-37387315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr16:55786477-55786201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr16:25254559-25254841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr16:14722177-14721862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr16:28431702-28431377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
44, 167
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr16:7256112-7256425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
47, 167
               

               
Conread position:
               
2-320
               

               
Cow position:
               
chr16:11100230-11099907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr16:3332989-3333341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr16:45551431-45551780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr16:15363318-15363676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 165
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr16:44138972-44138607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr16:40271616-40271996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr16:42079274-42078889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr16:49253173-49252790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 159
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr16:15255385-15254983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
53, 160
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr16:51578834-51578446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
250, 32
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr16:31558458-31558873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr16:5654080-5654506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr16:18650488-18650042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr16:42423374-42422927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr16:47404470-47404905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr16:26500728-26501175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 159
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr16:30311541-30311089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 140
               

               
Conread position:
               
2-448
               

               
Cow position:
               
chr16:56281703-56281242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-449
               

               
Cow position:
               
chr16:20761758-20762219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr16:51400182-51399723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:712399-711933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:2947266-2946800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:2960775-2961240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:4399289-4399762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:8646953-8647428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:10812978-10813444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:15424669-15424203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:25075689-25076155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:25880411-25880877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:26133081-26132615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:29523649-29524115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:34021756-34021290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:35285171-35284707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:40642891-40642425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr16:54431177-54430711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr16:237810-238296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr16:20503115-20503581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr16:24752831-24752364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr16:26659060-26659532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr16:31122690-31122222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr16:45631594-45632068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr16:55308976-55308513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 174
               

               
Conread position:
               
2-455
               

               
Cow position:
               
chr16:44229115-44228648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr16:50190024-50189561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:6264157-6263686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:6677813-6678284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:7022109-7021645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:7712712-7713175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:12652016-12652487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:15349070-15348606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:15904125-15903654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:16942812-16943281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:18212099-18211628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:23877570-23878042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:24209302-24208842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 152
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:25329201-25328727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:27064303-27063833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:41576605-41577076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:41733792-41734261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr16:41838084-41837622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr16:23363933-23363466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
52, 167
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr16:28922355-28922806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr16:46752715-46752238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr16:11619295-11619783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 272
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr16:37670181-37669703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 256
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr16:39646124-39646579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr16:49126619-49126154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr16:4972461-4971992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
59, 166
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr16:5666193-5666662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 166
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr16:30801388-30801862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr16:42218129-42217655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr16:42379119-42379592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr16:43537302-43537775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr16:50906030-50906512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 170
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr16:53509424-53508949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr16:11568545-11568082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 123
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr16:32118673-32119149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 167
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr16:54298045-54298505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:3012210-3012685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:9212124-9212599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 154
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:15754845-15754368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:16540493-16540968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:16567193-16567669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:19082142-19082617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:19757223-19756756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:22158034-22157569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:23027811-23028288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:24408009-24408486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:26389574-26390051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:29107051-29106574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:37052969-37052492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:39787907-39787430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:42161830-42161354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr16:43819981-43819511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-465
               

               
Cow position:
               
chr16:7075473-7075955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr16:46223417-46222924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 264
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr16:49125955-49125486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr16:23990926-23990422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
2-487
               

               
Cow position:
               
chr16:51599038-51598547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr16:29158696-29159190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr16:42092810-42092319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 162
               

               
Conread position:
               
2-497
               

               
Cow position:
               
chr16:34999040-34998549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
2-497
               

               
Cow position:
               
chr16:55682859-55683375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr16:13601524-13601005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 224
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr16:14241914-14242446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 304
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr16:18758274-18757761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr16:33704370-33704883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 181
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr16:45609550-45610063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr16:46552371-46552872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 259
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr16:51500498-51501007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 142
               

               
Conread position:
               
2-533
               

               
Cow position:
               
chr16:18354381-18353838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-536
               

               
Cow position:
               
chr16:51113307-51112759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 48
               

               
Conread position:
               
2-586
               

               
Cow position:
               
chr16:18205525-18206144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 259
               

               
Conread position:
               
2-591
               

               
Cow position:
               
chr16:27013486-27014076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
2-593
               

               
Cow position:
               
chr16:26134774-26134196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
156, 63
               

               
Conread position:
               
2-594
               

               
Cow position:
               
chr16:43743356-43742755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
2-597
               

               
Cow position:
               
chr16:51710556-51709949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
2-603
               

               
Cow position:
               
chr16:23066232-23066842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-603
               

               
Cow position:
               
chr16:56231386-56232018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 167
               

               
Conread position:
               
2-607
               

               
Cow position:
               
chr16:5725044-5725673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
2-607
               

               
Cow position:
               
chr16:44899158-44898571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 45
               

               
Conread position:
               
2-608
               

               
Cow position:
               
chr16:45731806-45731193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
3-144
               

               
Cow position:
               
chr16:31543859-31544008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
3-153
               

               
Cow position:
               
chr16:21315796-21315949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr16:41650433-41650588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr16:2962760-2962589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
3-168
               

               
Cow position:
               
chr16:3351560-3351732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
3-168
               

               
Cow position:
               
chr16:41163661-41163489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 166
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr16:34141212-34141390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr16:2480063-2479885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr16:5488968-5489146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr16:7673286-7673108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr16:48411741-48411919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr16:43578670-43578861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr16:46146928-46147146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr16:15188152-15188396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 160
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr16:43894166-43893923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 165
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr16:20967498-20967253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr16:24215750-24215504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr16:28206022-28205776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr16:40293073-40292823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr16:23875768-23875521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 166
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr16:1435408-1435659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr16:11130496-11130235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 139
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:3147945-3147678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 165
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:7467707-7467975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 160
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:8651922-8652189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:10368369-10368102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:23248865-23248600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 164
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:23532904-23532637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:25444973-25445240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:33102399-33102132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:46101524-46101258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr16:52837554-52837300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr16:41516174-41516443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr16:25454382-25454111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 167
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr16:14385520-14385782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
206, 47
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:4428335-4428611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 162
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:5350411-5350133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:6711936-6712215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:7048206-7047929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:10202838-10202562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
58, 165
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:12283665-12283943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:14351362-14351085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:14611241-14611520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 168
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:15570957-15571234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:15979280-15979003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:17143370-17143647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
43, 167
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:20234533-20234257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 160
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:23475658-23475935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:24240305-24240028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:28468026-28467749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:29078509-29078225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:29089726-29089450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:32522779-32523054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 136
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:43513132-43513409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:43769850-43769573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:48520024-48520299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:50712342-50712065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:51641348-51641625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:52527325-52527603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 160
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:53770081-53769806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr16:54322311-54322035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr16:12160019-12159740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
57, 166
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr16:11632747-11632447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr16:418194-418506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr16:14662026-14661715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr16:9736265-9735941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
42, 166
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr16:39343962-39344296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr16:32920822-32921228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 162
               

               
Conread position:
               
3-443
               

               
Cow position:
               
chr16:56149875-56150313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
3-453
               

               
Cow position:
               
chr16:25936178-25936636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
3-457
               

               
Cow position:
               
chr16:7541863-7542319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 159
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr16:28143767-28144230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-459
               

               
Cow position:
               
chr16:22130104-22129641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr16:51087878-51088346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
3-494
               

               
Cow position:
               
chr16:9235935-9235408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
3-509
               

               
Cow position:
               
chr16:39474572-39474063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
4-170
               

               
Cow position:
               
chr16:15370071-15370245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr16:35196265-35196090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 163
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr16:5963151-5962908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 164
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr16:42219606-42219339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr16:13421828-13421404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
4-460
               

               
Cow position:
               
chr16:2223838-2223363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
51, 142
               

               
Conread position:
               
4-461
               

               
Cow position:
               
chr16:48087303-48086833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
4-602
               

               
Cow position:
               
chr16:34210848-34210223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 167
               

               
Conread position:
               
4-603
               

               
Cow position:
               
chr16:16265532-16264912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
54, 166
               

               
Conread position:
               
5-159
               

               
Cow position:
               
chr16:37453234-37453075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
5-170
               

               
Cow position:
               
chr16:36228088-36227915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr16:46105206-46105387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr16:8796661-8796393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr16:31666394-31666119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 165
               

               
Conread position:
               
5-401
               

               
Cow position:
               
chr16:9787147-9787544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
5-455
               

               
Cow position:
               
chr16:16369161-16368709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 163
               

               
Conread position:
               
5-458
               

               
Cow position:
               
chr16:49094007-49093549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
5-458
               

               
Cow position:
               
chr16:52410015-52409548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr16:675069-675528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr16:7504674-7505128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 158
               

               
Conread position:
               
5-498
               

               
Cow position:
               
chr16:22919059-22919545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 149
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr16:24128270-24128543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr16:45654471-45654177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr16:50516338-50516033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
6-315
               

               
Cow position:
               
chr16:20662705-20663035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 240
               

               
Conread position:
               
6-416
               

               
Cow position:
               
chr16:8620820-8621224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr16:39384969-39385410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
6-437
               

               
Cow position:
               
chr16:16177388-16177829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
6-443
               

               
Cow position:
               
chr16:8807522-8807076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 160
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr16:4910964-4910491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr16:7152587-7152137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 142
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr16:17665209-17665668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr16:42970363-42969891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 163
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr16:18141756-18141286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 154
               

               
Conread position:
               
6-477
               

               
Cow position:
               
chr16:9932732-9933213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
115, 87
               

               
Conread position:
               
6-478
               

               
Cow position:
               
chr16:14758284-14758791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
6-498
               

               
Cow position:
               
chr16:5416190-5415683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 169
               

               
Conread position:
               
6-545
               

               
Cow position:
               
chr16:41590356-41590893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 128
               

               
Conread position:
               
6-603
               

               
Cow position:
               
chr16:819830-820458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
7-166
               

               
Cow position:
               
chr16:15477750-15477915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr16:12534867-12534626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
7-250
               

               
Cow position:
               
chr16:37445325-37445082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 156
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr16:3768669-3768408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
54, 131
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr16:25345074-25345336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 158
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr16:43563423-43563686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
7-274
               

               
Cow position:
               
chr16:2724123-2723853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
7-276
               

               
Cow position:
               
chr16:8813004-8812736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
40, 162
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr16:10441340-10441613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr16:15495537-15495810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr16:29051233-29051511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 156
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr16:49768648-49768375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr16:54231252-54230978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 164
               

               
Conread position:
               
7-450
               

               
Cow position:
               
chr16:22868629-22868154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
50, 397
               

               
Conread position:
               
7-459
               

               
Cow position:
               
chr16:20734178-20733721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 162
               

               
Conread position:
               
7-498
               

               
Cow position:
               
chr16:8439050-8438574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
7-608
               

               
Cow position:
               
chr16:8026273-8025657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 164
               

               
Conread position:
               
8-159
               

               
Cow position:
               
chr16:45534555-45534713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
8-166
               

               
Cow position:
               
chr16:45562770-45562935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 161
               

               
Conread position:
               
8-169
               

               
Cow position:
               
chr16:52169649-52169818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr16:41152879-41153141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
8-329
               

               
Cow position:
               
chr16:6379537-6379209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
8-461
               

               
Cow position:
               
chr16:31978618-31978151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr16:3633686-3634155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr16:6800729-6800271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr16:15824864-15824405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
50, 158
               

               
Conread position:
               
8-465
               

               
Cow position:
               
chr16:32970500-32970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
47, 164
               

               
Conread position:
               
8-476
               

               
Cow position:
               
chr16:33226961-33226487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 121
               

               
Conread position:
               
8-498
               

               
Cow position:
               
chr16:37924592-37924100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
8-607
               

               
Cow position:
               
chr16:40333751-40333124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr16:12087082-12086868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr16:25183530-25183299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr16:47773368-47773626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
9-305
               

               
Cow position:
               
chr16:24427074-24427369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
52, 160
               

               
Conread position:
               
9-459
               

               
Cow position:
               
chr16:30143642-30143173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
9-460
               

               
Cow position:
               
chr16:48398672-48398220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
9-570
               

               
Cow position:
               
chr16:40561797-40562374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 161
               

               
Conread position:
               
10-460
               

               
Cow position:
               
chr16:24228778-24228318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
10-464
               

               
Cow position:
               
chr16:55656049-55656516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
10-467
               

               
Cow position:
               
chr16:44676463-44676915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr16:8449085-8448811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 154
               

               
Conread position:
               
11-454
               

               
Cow position:
               
chr16:20864970-20865426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
11-463
               

               
Cow position:
               
chr16:19643468-19643925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 158
               

               
Conread position:
               
11-498
               

               
Cow position:
               
chr16:20024996-20025519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 410
               

               
Conread position:
               
11-530
               

               
Cow position:
               
chr16:7498643-7499165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
46, 156
               

               
Conread position:
               
14-210
               

               
Cow position:
               
chr16:728479-728675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
14-239
               

               
Cow position:
               
chr16:33860452-33860677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
14-456
               

               
Cow position:
               
chr16:24425237-24425694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr16:22804997-22804563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
41, 128
               

               
Conread position:
               
15-391
               

               
Cow position:
               
chr16:49141981-49141599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
15-453
               

               
Cow position:
               
chr16:16210337-16209885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
15-509
               

               
Cow position:
               
chr16:13307288-13306783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
20-271
               

               
Cow position:
               
chr16:30663289-30663036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
20-458
               

               
Cow position:
               
chr16:27592515-27592075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
37-281
               

               
Cow position:
               
chr16:52538617-52538847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
172, 30
               

               
Conread position:
               
39-271
               

               
Cow position:
               
chr16:16142015-16141793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
164, 17
               

               
Conread position:
               
40-250
               

               
Cow position:
               
chr16:13191764-13191565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
40-597
               

               
Cow position:
               
chr16:52835265-52834701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
46-168
               

               
Cow position:
               
chr16:15320930-15320809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 82
               

               
Conread position:
               
46-344
               

               
Cow position:
               
chr16:33777434-33777731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 115
               

               
Conread position:
               
48-181
               

               
Cow position:
               
chr16:36911497-36911365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
48-342
               

               
Cow position:
               
chr16:47341865-47341572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
221, 28
               

               
Conread position:
               
48-464
               

               
Cow position:
               
chr16:5395932-5395509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
49-323
               

               
Cow position:
               
chr16:1223209-1222936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
49-584
               

               
Cow position:
               
chr16:36930691-36930150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
51-315
               

               
Cow position:
               
chr16:47558716-47559003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 222
               

               
Conread position:
               
51-460
               

               
Cow position:
               
chr16:6263234-6262820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
51-509
               

               
Cow position:
               
chr16:15188820-15189269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 124
               

               
Conread position:
               
51-511
               

               
Cow position:
               
chr16:7702154-7702610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
52-461
               

               
Cow position:
               
chr16:13698130-13698550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 109
               

               
Conread position:
               
53-282
               

               
Cow position:
               
chr16:6389259-6389035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
53-460
               

               
Cow position:
               
chr16:9948409-9948799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
150, 108
               

               
Conread position:
               
55-315
               

               
Cow position:
               
chr16:15408248-15407995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
55-356
               

               
Cow position:
               
chr16:44654606-44654317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
154, 82
               

               
Conread position:
               
55-461
               

               
Cow position:
               
chr16:11103213-11102786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
55-461
               

               
Cow position:
               
chr16:16236503-16236090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
220, 106
               

               
Conread position:
               
55-498
               

               
Cow position:
               
chr16:15960689-15960212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
56-153
               

               
Cow position:
               
chr16:3565925-3566023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
56-159
               

               
Cow position:
               
chr16:4192764-4192661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-159
               

               
Cow position:
               
chr16:15905425-15905322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-159
               

               
Cow position:
               
chr16:43309435-43309332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-163
               

               
Cow position:
               
chr16:27004783-27004891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-166
               

               
Cow position:
               
chr16:8703458-8703567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
56-166
               

               
Cow position:
               
chr16:16057526-16057415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
56-166
               

               
Cow position:
               
chr16:52889916-52889808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
56-168
               

               
Cow position:
               
chr16:13713266-13713153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
56-168
               

               
Cow position:
               
chr16:41520367-41520483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
56-174
               

               
Cow position:
               
chr16:10020440-10020323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-174
               

               
Cow position:
               
chr16:26176464-26176581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-180
               

               
Cow position:
               
chr16:53086958-53086835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
56-182
               

               
Cow position:
               
chr16:54515132-54515259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr16:23680960-23681094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr16:56612849-56612972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
56-207
               

               
Cow position:
               
chr16:34483291-34483432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
56-211
               

               
Cow position:
               
chr16:21656313-21656166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-229
               

               
Cow position:
               
chr16:7549389-7549554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 105
               

               
Conread position:
               
56-241
               

               
Cow position:
               
chr16:56853580-56853756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-243
               

               
Cow position:
               
chr16:18939625-18939811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
56-249
               

               
Cow position:
               
chr16:5435982-5436167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-249
               

               
Cow position:
               
chr16:11275608-11275423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
147, 106
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr16:20260055-20260251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr16:53612907-53613110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr16:54083333-54083517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
56-269
               

               
Cow position:
               
chr16:56905950-56905736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr16:11916850-11916644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr16:12249267-12249058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr16:14679768-14679974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr16:18374309-18374103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
152, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr16:21156437-21156643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr16:25614479-25614685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr16:26316415-26316209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr16:49217935-49217733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
153, 85
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr16:52255058-52254852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-273
               

               
Cow position:
               
chr16:29823308-29823092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
56-274
               

               
Cow position:
               
chr16:10866911-10867120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-281
               

               
Cow position:
               
chr16:33458385-33458163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
135, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:18937237-18937025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
149, 84
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:18978345-18978557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
149, 84
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:20559763-20559979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 68
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:33198839-33198622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
151, 99
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:34533600-34533819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:34809527-34809743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:39033193-39032977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
154, 99
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:40305557-40305773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:44831151-44831367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:55022668-55022451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
56-311
               

               
Cow position:
               
chr16:39683715-39683454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 62
               

               
Conread position:
               
56-315
               

               
Cow position:
               
chr16:831949-831710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 32
               

               
Conread position:
               
56-322
               

               
Cow position:
               
chr16:44255780-44255537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
56-350
               

               
Cow position:
               
chr16:45263721-45263424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
198, 136
               

               
Conread position:
               
56-359
               

               
Cow position:
               
chr16:43804126-43804431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
56-368
               

               
Cow position:
               
chr16:5867649-5867328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-369
               

               
Cow position:
               
chr16:25483976-25484308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 246
               

               
Conread position:
               
56-369
               

               
Cow position:
               
chr16:37442504-37442182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
56-369
               

               
Cow position:
               
chr16:53225178-53224870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
56-379
               

               
Cow position:
               
chr16:15726735-15726418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
219, 105
               

               
Conread position:
               
56-384
               

               
Cow position:
               
chr16:3288659-3288978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 105
               

               
Conread position:
               
56-384
               

               
Cow position:
               
chr16:50872554-50872227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
56-385
               

               
Cow position:
               
chr16:18051719-18052056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
146, 116
               

               
Conread position:
               
56-390
               

               
Cow position:
               
chr16:7427239-7426894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
148, 97
               

               
Conread position:
               
56-390
               

               
Cow position:
               
chr16:30939368-30939699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
56-391
               

               
Cow position:
               
chr16:28816482-28816129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
56-392
               

               
Cow position:
               
chr16:26074804-26075121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
231, 118
               

               
Conread position:
               
56-397
               

               
Cow position:
               
chr16:43851198-43850862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
56-401
               

               
Cow position:
               
chr16:30289942-30290296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-403
               

               
Cow position:
               
chr16:47626565-47626208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
194, 104
               

               
Conread position:
               
56-406
               

               
Cow position:
               
chr16:28112288-28111937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
213, 105
               

               
Conread position:
               
56-414
               

               
Cow position:
               
chr16:28695682-28695327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
56-416
               

               
Cow position:
               
chr16:3918158-3918524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
148, 98
               

               
Conread position:
               
56-428
               

               
Cow position:
               
chr16:4502906-4503284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-428
               

               
Cow position:
               
chr16:14441518-14441894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
213, 99
               

               
Conread position:
               
56-436
               

               
Cow position:
               
chr16:498721-499109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
84, 208
               

               
Conread position:
               
56-445
               

               
Cow position:
               
chr16:16424978-16424591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
154, 104
               

               
Conread position:
               
56-446
               

               
Cow position:
               
chr16:4762756-4763153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
56-449
               

               
Cow position:
               
chr16:15974205-15973805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr16:20277360-20276956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr16:6692983-6692569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr16:19633143-19632741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
152, 42
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr16:28420280-28419858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 209
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr16:52095352-52095760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr16:55124440-55124032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-459
               

               
Cow position:
               
chr16:4712529-4712934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 37
               

               
Conread position:
               
56-459
               

               
Cow position:
               
chr16:53932342-53931942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
213, 105
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr16:46254081-46253652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 203
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr16:49169753-49169347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 90
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr16:54287501-54287900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
219, 99
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr16:55579745-55580160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
134, 103
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr16:600570-600981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr16:7665253-7665672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 101
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr16:8840518-8840927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr16:9497643-9497233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr16:23823385-23822992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
147, 71
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr16:30515979-30515554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
98, 169
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr16:40632976-40632567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
153, 101
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr16:7042888-7042473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
149, 105
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr16:22912794-22913209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr16:24825693-24826112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
217, 105
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr16:33926055-33925649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 95
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr16:37146823-37147238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr16:45647960-45647546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 85
               

               
Conread position:
               
56-465
               

               
Cow position:
               
chr16:45139294-45139711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 104
               

               
Conread position:
               
56-481
               

               
Cow position:
               
chr16:9846086-9845650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
148, 104
               

               
Conread position:
               
56-490
               

               
Cow position:
               
chr16:32132160-32132577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
214, 50
               

               
Conread position:
               
56-497
               

               
Cow position:
               
chr16:25965135-25965576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
154, 101
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr16:18949246-18949671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 119
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr16:48370320-48369874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
211, 105
               

               
Conread position:
               
56-514
               

               
Cow position:
               
chr16:48341062-48340600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 25
               

               
Conread position:
               
56-529
               

               
Cow position:
               
chr16:11105177-11105662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
163, 90
               

               
Conread position:
               
56-530
               

               
Cow position:
               
chr16:39394212-39394679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
56-531
               

               
Cow position:
               
chr16:41752955-41752468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 36
               

               
Conread position:
               
56-533
               

               
Cow position:
               
chr16:35187881-35188367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 12
               

               
Conread position:
               
56-545
               

               
Cow position:
               
chr16:43275648-43276148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 105
               

               
Conread position:
               
56-558
               

               
Cow position:
               
chr16:17142563-17143078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
213, 36
               

               
Conread position:
               
56-558
               

               
Cow position:
               
chr16:49216331-49215865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
256, 6
               

               
Conread position:
               
56-558
               

               
Cow position:
               
chr16:49230144-49229630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 124
               

               
Conread position:
               
56-569
               

               
Cow position:
               
chr16:55586977-55586457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 86
               

               
Conread position:
               
56-597
               

               
Cow position:
               
chr16:42339831-42340377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
56-598
               

               
Cow position:
               
chr16:30638965-30639507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 106
               

               
Conread position:
               
56-598
               

               
Cow position:
               
chr16:53267350-53267905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 106
               

               
Conread position:
               
56-601
               

               
Cow position:
               
chr16:33507692-33508244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
56-604
               

               
Cow position:
               
chr16:18693528-18692960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 173
               

               
Conread position:
               
56-605
               

               
Cow position:
               
chr16:29654954-29655522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
153, 77
               

               
Conread position:
               
56-606
               

               
Cow position:
               
chr16:18426807-18427370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 89
               

               
Conread position:
               
56-608
               

               
Cow position:
               
chr16:10858000-10857431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 105
               

               
Conread position:
               
56-608
               

               
Cow position:
               
chr16:23024962-23025530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 101
               

               
Conread position:
               
57-156
               

               
Cow position:
               
chr16:50283016-50282917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-157
               

               
Cow position:
               
chr16:5363482-5363582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-250
               

               
Cow position:
               
chr16:48084077-48083892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
57-282
               

               
Cow position:
               
chr16:13177027-13177241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
146, 101
               

               
Conread position:
               
57-282
               

               
Cow position:
               
chr16:45233966-45234181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
57-345
               

               
Cow position:
               
chr16:54099992-54100272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
230, 100
               

               
Conread position:
               
57-352
               

               
Cow position:
               
chr16:5293285-5293586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
57-454
               

               
Cow position:
               
chr16:21012291-21011887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
146, 93
               

               
Conread position:
               
57-455
               

               
Cow position:
               
chr16:23563769-23564161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
147, 98
               

               
Conread position:
               
57-460
               

               
Cow position:
               
chr16:16963438-16963839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
211, 72
               

               
Conread position:
               
57-460
               

               
Cow position:
               
chr16:17003362-17003764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
57-461
               

               
Cow position:
               
chr16:56832119-56831706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
57-500
               

               
Cow position:
               
chr16:17605916-17606377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 151
               

               
Conread position:
               
57-537
               

               
Cow position:
               
chr16:16402701-16402211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 104
               

               
Conread position:
               
57-575
               

               
Cow position:
               
chr16:32837906-32837389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
58-160
               

               
Cow position:
               
chr16:37116466-37116567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
58-166
               

               
Cow position:
               
chr16:19976474-19976582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
58-282
               

               
Cow position:
               
chr16:40109201-40109414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
58-460
               

               
Cow position:
               
chr16:4144688-4145097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 102
               

               
Conread position:
               
58-498
               

               
Cow position:
               
chr16:23737813-23738259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 63
               

               
Conread position:
               
58-593
               

               
Cow position:
               
chr16:18557634-18557086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 83
               

               
Conread position:
               
59-271
               

               
Cow position:
               
chr16:1257017-1257220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
59-282
               

               
Cow position:
               
chr16:12919188-12918976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
59-464
               

               
Cow position:
               
chr16:46555583-46555997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 46
               

               
Conread position:
               
60-271
               

               
Cow position:
               
chr16:46796383-46796584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
60-406
               

               
Cow position:
               
chr16:30027498-30027834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
143, 100
               

               
Conread position:
               
60-461
               

               
Cow position:
               
chr16:7078097-7077708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
60-464
               

               
Cow position:
               
chr16:8782954-8783365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
199, 102
               

               
Conread position:
               
60-464
               

               
Cow position:
               
chr16:33299024-33299432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
143, 25
               

               
Conread position:
               
61-460
               

               
Cow position:
               
chr16:22842438-22842023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 196
               

               
Conread position:
               
63-461
               

               
Cow position:
               
chr16:44744516-44744098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 198
               

               
Conread position:
               
63-464
               

               
Cow position:
               
chr16:40382652-40382234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 193
               

               
Conread position:
               
63-465
               

               
Cow position:
               
chr16:14570604-14571013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
146, 98
               

               
Conread position:
               
64-442
               

               
Cow position:
               
chr16:44973123-44973510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 42
               

               
Conread position:
               
65-602
               

               
Cow position:
               
chr16:31419076-31419637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
65-608
               

               
Cow position:
               
chr16:52789701-52790242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
144, 68
               

               
Conread position:
               
66-453
               

               
Cow position:
               
chr16:28376947-28376553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
67-497
               

               
Cow position:
               
chr16:13195691-13195263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
139, 94
               

               
Conread position:
               
68-320
               

               
Cow position:
               
chr16:22340727-22340968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
207, 93
               

               
Conread position:
               
69-274
               

               
Cow position:
               
chr16:52586362-52586168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
69-464
               

               
Cow position:
               
chr16:32905892-32906290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
135, 92
               

               
Conread position:
               
69-568
               

               
Cow position:
               
chr16:23673795-23674286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
69-586
               

               
Cow position:
               
chr16:14754690-14754139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
70-498
               

               
Cow position:
               
chr16:35757857-35758280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
187, 87
               

               
Conread position:
               
73-315
               

               
Cow position:
               
chr16:8706907-8706665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
132, 55
               

               
Conread position:
               
73-460
               

               
Cow position:
               
chr16:4981725-4981343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
162, 82
               

               
Conread position:
               
74-327
               

               
Cow position:
               
chr16:48607429-48607175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 89
               

               
Conread position:
               
77-453
               

               
Cow position:
               
chr16:24988589-24988972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
78-269
               

               
Cow position:
               
chr16:54228079-54227896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
78-270
               

               
Cow position:
               
chr16:46765500-46765317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
127, 83
               

               
Conread position:
               
78-285
               

               
Cow position:
               
chr16:12451201-12450996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 83
               

               
Conread position:
               
78-458
               

               
Cow position:
               
chr16:9431823-9432210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
78-498
               

               
Cow position:
               
chr16:39514436-39513998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 83
               

               
Conread position:
               
78-593
               

               
Cow position:
               
chr16:48096114-48095573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
174, 61
               

               
Conread position:
               
78-608
               

               
Cow position:
               
chr16:56445754-56445231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 83
               

               
Conread position:
               
79-313
               

               
Cow position:
               
chr16:46453114-46452881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
199, 67
               

               
Conread position:
               
80-271
               

               
Cow position:
               
chr16:51522419-51522601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
81-461
               

               
Cow position:
               
chr16:54672894-54673278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
194, 5
               

               
Conread position:
               
84-464
               

               
Cow position:
               
chr16:39243872-39243497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
125, 39
               

               
Conread position:
               
84-497
               

               
Cow position:
               
chr16:53547932-53547514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
183, 78
               

               
Conread position:
               
85-437
               

               
Cow position:
               
chr16:47510319-47509966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
119, 72
               

               
Conread position:
               
86-498
               

               
Cow position:
               
chr16:4857437-4857024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
87-498
               

               
Cow position:
               
chr16:4626737-4626313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
182, 75
               

               
Conread position:
               
88-274
               

               
Cow position:
               
chr16:14629669-14629493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
88-477
               

               
Cow position:
               
chr16:30715149-30715557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
91-453
               

               
Cow position:
               
chr16:13791166-13791544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
110, 69
               

               
Conread position:
               
92-433
               

               
Cow position:
               
chr16:29066830-29067168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 69
               

               
Conread position:
               
92-461
               

               
Cow position:
               
chr16:11775385-11775017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
165, 18
               

               
Conread position:
               
93-545
               

               
Cow position:
               
chr16:11790664-11791139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 246
               

               
Conread position:
               
96-498
               

               
Cow position:
               
chr16:33645686-33646093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
97-461
               

               
Cow position:
               
chr16:15762496-15762121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
113, 64
               

               
Conread position:
               
98-598
               

               
Cow position:
               
chr16:23472411-23472943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
102, 84
               

               
Conread position:
               
110-447
               

               
Cow position:
               
chr16:11621123-11620792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
110-482
               

               
Cow position:
               
chr16:55782779-55782412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
177, 44
               

               
Conread position:
               
110-605
               

               
Cow position:
               
chr16:15808652-15809168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
111-498
               

               
Cow position:
               
chr16:13611772-13611376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
167, 51
               

               
Conread position:
               
112-584
               

               
Cow position:
               
chr16:37062710-37062236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
157, 50
               

               
Conread position:
               
117-532
               

               
Cow position:
               
chr16:42242431-42242001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
119-461
               

               
Cow position:
               
chr16:37379959-37380305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
132-461
               

               
Cow position:
               
chr16:18036668-18036982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
137-461
               

               
Cow position:
               
chr16:14360814-14361138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
142-597
               

               
Cow position:
               
chr16:16545774-16546250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 119
               

               
Conread position:
               
143-457
               

               
Cow position:
               
chr16:27004905-27005234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
143-461
               

               
Cow position:
               
chr16:52889705-52889375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
144-497
               

               
Cow position:
               
chr16:5477641-5477284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
148-601
               

               
Cow position:
               
chr16:29095666-29096121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
152-468
               

               
Cow position:
               
chr16:11643073-11643396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
153-461
               

               
Cow position:
               
chr16:37116787-37117110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
156-424
               

               
Cow position:
               
chr16:5740972-5741238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
140, 53
               

               
Conread position:
               
156-461
               

               
Cow position:
               
chr16:17745552-17745871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
156-485
               

               
Cow position:
               
chr16:45813977-45813634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
156-529
               

               
Cow position:
               
chr16:4499158-4499542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
156-529
               

               
Cow position:
               
chr16:52218806-52219184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
156-606
               

               
Cow position:
               
chr16:48385684-48385208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 105
               

               
Conread position:
               
159-411
               

               
Cow position:
               
chr16:5243683-5243956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
163-498
               

               
Cow position:
               
chr16:5636313-5636662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
164-467
               

               
Cow position:
               
chr16:48145674-48145361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 231
               

               
Conread position:
               
164-521
               

               
Cow position:
               
chr16:4979541-4979908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
164-544
               

               
Cow position:
               
chr16:13181465-13181867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
164-592
               

               
Cow position:
               
chr16:3628543-3628971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
164-595
               

               
Cow position:
               
chr16:47518574-47519030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
165-498
               

               
Cow position:
               
chr16:8933693-8933350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
110, 86
               

               
Conread position:
               
168-466
               

               
Cow position:
               
chr16:20634141-20633837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
168-474
               

               
Cow position:
               
chr16:48006761-48006441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
169-436
               

               
Cow position:
               
chr16:34483691-34483942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
213, 40
               

               
Conread position:
               
170-460
               

               
Cow position:
               
chr16:14106377-14106676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
171-461
               

               
Cow position:
               
chr16:51869370-51869674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 232
               

               
Conread position:
               
171-608
               

               
Cow position:
               
chr16:44116-44556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
172-372
               

               
Cow position:
               
chr16:29379987-29380203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
172-466
               

               
Cow position:
               
chr16:20476265-20476575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
172-593
               

               
Cow position:
               
chr16:29766077-29766516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 106
               

               
Conread position:
               
172-595
               

               
Cow position:
               
chr16:8704030-8704435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
174-595
               

               
Cow position:
               
chr16:43506063-43505637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
176-596
               

               
Cow position:
               
chr16:23033606-23034028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
178-428
               

               
Cow position:
               
chr16:30209502-30209752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
114, 78
               

               
Conread position:
               
178-477
               

               
Cow position:
               
chr16:24672620-24672305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
178-598
               

               
Cow position:
               
chr16:53627684-53627252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
178-603
               

               
Cow position:
               
chr16:29510594-29510188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
179-544
               

               
Cow position:
               
chr16:28267270-28266902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
180-403
               

               
Cow position:
               
chr16:32385080-32384843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
180-458
               

               
Cow position:
               
chr16:46521643-46521922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
180-459
               

               
Cow position:
               
chr16:3246451-3246172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
180-459
               

               
Cow position:
               
chr16:13579102-13578828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
180-472
               

               
Cow position:
               
chr16:47820312-47820614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
180-497
               

               
Cow position:
               
chr16:4987689-4988002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
180-602
               

               
Cow position:
               
chr16:50688267-50688712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 167
               

               
Conread position:
               
181-569
               

               
Cow position:
               
chr16:15320727-15320330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
182-603
               

               
Cow position:
               
chr16:52577203-52577645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
183-528
               

               
Cow position:
               
chr16:13752379-13752025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 214
               

               
Conread position:
               
184-457
               

               
Cow position:
               
chr16:14799995-14799709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
184-464
               

               
Cow position:
               
chr16:7429123-7429417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
184-490
               

               
Cow position:
               
chr16:11615483-11615175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
184-529
               

               
Cow position:
               
chr16:12169946-12169591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
184-595
               

               
Cow position:
               
chr16:13660478-13660055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
184-596
               

               
Cow position:
               
chr16:8315429-8315013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
184-597
               

               
Cow position:
               
chr16:15805727-15806133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
184-602
               

               
Cow position:
               
chr16:39164991-39165438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
184-608
               

               
Cow position:
               
chr16:48492931-48493374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
189-461
               

               
Cow position:
               
chr16:38905476-38905199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
189-498
               

               
Cow position:
               
chr16:8522637-8522312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
189-498
               

               
Cow position:
               
chr16:18402446-18402765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
189-516
               

               
Cow position:
               
chr16:11153438-11153091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
189-540
               

               
Cow position:
               
chr16:42257205-42257570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
189-593
               

               
Cow position:
               
chr16:26373201-26372767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
189-598
               

               
Cow position:
               
chr16:19976715-19977137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
15, 231
               

               
Conread position:
               
190-602
               

               
Cow position:
               
chr16:16056286-16055875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
191-598
               

               
Cow position:
               
chr16:47368535-47368933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
192-461
               

               
Cow position:
               
chr16:4902355-4902623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
192-464
               

               
Cow position:
               
chr16:56082608-56082327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
192-498
               

               
Cow position:
               
chr16:53892028-53891708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
193-591
               

               
Cow position:
               
chr16:54515481-54515894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
193-593
               

               
Cow position:
               
chr16:51070175-51069738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 259
               

               
Conread position:
               
195-412
               

               
Cow position:
               
chr16:25043482-25043708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
195-465
               

               
Cow position:
               
chr16:4372739-4372454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 224
               

               
Conread position:
               
195-485
               

               
Cow position:
               
chr16:30096374-30096070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 203
               

               
Conread position:
               
199-593
               

               
Cow position:
               
chr16:11008103-11008524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
201-477
               

               
Cow position:
               
chr16:13233182-13232896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
201-598
               

               
Cow position:
               
chr16:25839380-25839812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
202-459
               

               
Cow position:
               
chr16:10040074-10039811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
202-601
               

               
Cow position:
               
chr16:45047859-45047451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
203-392
               

               
Cow position:
               
chr16:4875763-4875961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
203-460
               

               
Cow position:
               
chr16:45534948-45535212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 181
               

               
Conread position:
               
203-465
               

               
Cow position:
               
chr16:1725308-1725033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
203-514
               

               
Cow position:
               
chr16:41608373-41608706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
203-533
               

               
Cow position:
               
chr16:51246728-51247052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
204-598
               

               
Cow position:
               
chr16:19003305-19002909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
210-498
               

               
Cow position:
               
chr16:50288929-50289230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
212-501
               

               
Cow position:
               
chr16:43105739-43105435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
216-608
               

               
Cow position:
               
chr16:26156357-26155951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr16:10592226-10592470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
240-574
               

               
Cow position:
               
chr16:44723217-44722877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
261-591
               

               
Cow position:
               
chr16:41689529-41689866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
268-608
               

               
Cow position:
               
chr16:22808718-22808363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
269-460
               

               
Cow position:
               
chr16:7549806-7550002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
269-585
               

               
Cow position:
               
chr16:8236480-8236171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
273-551
               

               
Cow position:
               
chr16:9444805-9445095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
273-593
               

               
Cow position:
               
chr16:38620803-38621132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
273-597
               

               
Cow position:
               
chr16:27723057-27723410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
273-608
               

               
Cow position:
               
chr16:16524516-16524179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 197
               

               
Conread position:
               
274-460
               

               
Cow position:
               
chr16:13792814-13792624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
274-568
               

               
Cow position:
               
chr16:21461873-21462175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
57, 170
               

               
Conread position:
               
274-584
               

               
Cow position:
               
chr16:46627992-46627679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
274-597
               

               
Cow position:
               
chr16:6344593-6344258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
274-598
               

               
Cow position:
               
chr16:11085535-11085199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 167
               

               
Conread position:
               
274-598
               

               
Cow position:
               
chr16:14974690-14974367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
274-598
               

               
Cow position:
               
chr16:20260334-20260654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
22, 116
               

               
Conread position:
               
274-601
               

               
Cow position:
               
chr16:8323140-8322792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
274-608
               

               
Cow position:
               
chr16:22872525-22872188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
274-610
               

               
Cow position:
               
chr16:45692987-45693336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
14, 290
               

               
Conread position:
               
278-559
               

               
Cow position:
               
chr16:10303902-10303607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 185
               

               
Conread position:
               
280-551
               

               
Cow position:
               
chr16:52222480-52222196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 151
               

               
Conread position:
               
288-610
               

               
Cow position:
               
chr16:228627-228303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
293-528
               

               
Cow position:
               
chr16:42444019-42444269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
294-571
               

               
Cow position:
               
chr16:30136030-30135751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 188
               

               
Conread position:
               
297-602
               

               
Cow position:
               
chr16:27160988-27160694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
297-608
               

               
Cow position:
               
chr16:5020194-5019889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
298-583
               

               
Cow position:
               
chr16:12072508-12072802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 163
               

               
Conread position:
               
301-516
               

               
Cow position:
               
chr16:25127086-25127300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
304-597
               

               
Cow position:
               
chr16:37719031-37719335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
311-585
               

               
Cow position:
               
chr16:15938642-15938362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
151, 85
               

               
Conread position:
               
317-597
               

               
Cow position:
               
chr16:42312277-42312565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
323-596
               

               
Cow position:
               
chr16:54226706-54226415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
323-597
               

               
Cow position:
               
chr16:1440331-1440608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
326-599
               

               
Cow position:
               
chr16:44581171-44580893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
327-521
               

               
Cow position:
               
chr16:18072074-18072278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
327-593
               

               
Cow position:
               
chr16:3566079-3566339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
169, 23
               

               
Conread position:
               
330-598
               

               
Cow position:
               
chr16:51652578-51652849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
331-460
               

               
Cow position:
               
chr16:13027576-13027707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
343-584
               

               
Cow position:
               
chr16:41711599-41711841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 52
               

               
Conread position:
               
343-598
               

               
Cow position:
               
chr16:50931599-50931332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
343-602
               

               
Cow position:
               
chr16:16946621-16946346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
354-585
               

               
Cow position:
               
chr16:28827249-28827008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
355-601
               

               
Cow position:
               
chr16:33121545-33121789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
355-608
               

               
Cow position:
               
chr16:28879873-28880126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
356-608
               

               
Cow position:
               
chr16:11661965-11662225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
358-585
               

               
Cow position:
               
chr16:43082302-43082072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 181
               

               
Conread position:
               
363-597
               

               
Cow position:
               
chr16:28454353-28454119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 197
               

               
Conread position:
               
372-540
               

               
Cow position:
               
chr16:56104967-56104789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
390-584
               

               
Cow position:
               
chr16:53420309-53420505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 168
               

               
Conread position:
               
396-603
               

               
Cow position:
               
chr16:47909373-47909155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
397-593
               

               
Cow position:
               
chr16:2619009-2618810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 33
               

               
Conread position:
               
403-593
               

               
Cow position:
               
chr16:49320942-49321132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
427-593
               

               
Cow position:
               
chr16:30929882-30930056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
427-602
               

               
Cow position:
               
chr16:50114187-50114374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
435-596
               

               
Cow position:
               
chr16:56282956-56283125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
435-597
               

               
Cow position:
               
chr16:25464069-25464231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
448-597
               

               
Cow position:
               
chr16:47963317-47963473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
450-604
               

               
Cow position:
               
chr16:10406553-10406391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
451-598
               

               
Cow position:
               
chr16:20664319-20664470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 85
               

               
Conread position:
               
453-603
               

               
Cow position:
               
chr16:11772217-11772062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 6
               

               
Conread position:
               
463-608
               

               
Cow position:
               
chr16:55070480-55070327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
482-608
               

               
Cow position:
               
chr16:13027206-13027077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
495-603
               

               
Cow position:
               
chr16:48542132-48542025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
505-602
               

               
Cow position:
               
chr16:16106916-16107013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.