• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Emb1-C0005213_E07.5
        

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:6127708-6127564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:17944395-17944663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr18:55782895-55782622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 49
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:90001-90301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr18:13172995-13172615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 169
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr18:19159431-19159016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr18:3179951-3180429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr18:43950371-43950845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
2-150
               

               
Cow position:
               
chr18:44484520-44484364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-156
               

               
Cow position:
               
chr18:33157322-33157477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
2-156
               

               
Cow position:
               
chr18:36232999-36232837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr18:36224313-36224478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr18:37691064-37690901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr18:10897193-10897368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr18:50092569-50092395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr18:3193265-3193443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 167
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr18:10292607-10292786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr18:16462776-16462597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr18:17927676-17927855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr18:19462159-19462338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr18:30406488-30406309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr18:30607864-30608043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr18:51698518-51698696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr18:11680222-11680412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr18:10890782-10890970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr18:5185512-5185303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr18:26568459-26568668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr18:45979236-45979453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr18:32283407-32283628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr18:4496648-4496408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr18:27833547-27833303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 109
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr18:23659027-23658780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr18:4950084-4950330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr18:6878095-6877850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr18:11271126-11270877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr18:12585608-12585361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr18:21738257-21738505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr18:35752118-35751874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr18:51601788-51601540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:602587-602319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:7050484-7050749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:13270781-13271049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:27798273-27798005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:27995558-27995826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:28086694-28086962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:32019987-32019719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:35364238-35363973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:42425451-42425718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:42629243-42629511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:43075796-43076062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:51191220-51190955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:52899599-52899867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
54, 167
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:55417861-55418129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:55436255-55435987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr18:55768648-55768372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 163
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr18:52629379-52629108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr18:20226616-20226336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr18:34056465-34056192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:5786570-5786845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 163
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:22591593-22591315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:30386126-30385846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:38090053-38089756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:51458966-51458689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr18:7076302-7076577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr18:7930611-7930332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr18:32284926-32285207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr18:32301071-32301352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr18:56482564-56482242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 204
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr18:19115926-19115591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 169
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr18:32908429-32908772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr18:6829532-6829183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 168
               

               
Conread position:
               
2-375
               

               
Cow position:
               
chr18:5457719-5457348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr18:16045467-16045079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 165
               

               
Conread position:
               
2-388
               

               
Cow position:
               
chr18:7649524-7649928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 172
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr18:45577100-45576687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 128
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr18:13293041-13293445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
53, 158
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr18:33272478-33272867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr18:4315837-4316280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr18:39709422-39709870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr18:51579906-51579441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:1611294-1611760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:26485274-26485740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:31201908-31202374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:33616543-33616077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:34051085-34050618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:37314847-37314381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:40059555-40060021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:42421873-42421407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:43538996-43539461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:54071952-54071486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr18:54365656-54365191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr18:11251503-11251036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr18:28101158-28101627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 166
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr18:31139628-31140095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-455
               

               
Cow position:
               
chr18:39279464-39279001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr18:30677193-30677662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-457
               

               
Cow position:
               
chr18:2609185-2608728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
201, 57
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr18:2270971-2270500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr18:18215143-18214673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr18:24036972-24036501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr18:26883601-26884071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr18:27555023-27554551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr18:33907679-33907208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr18:40141357-40140888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr18:51346167-51346638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr18:52574982-52575453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr18:56017575-56017110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr18:22275510-22275033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 167
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr18:36912168-36911687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
61, 168
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr18:42966370-42966866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
53, 194
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr18:20864517-20864980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr18:35636815-35636346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 178
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr18:37334644-37335104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 150
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr18:9007680-9008130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
53, 168
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr18:10655989-10656440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr18:11866881-11867338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr18:37733570-37734044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr18:52635549-52635069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr18:215503-215030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr18:24547990-24547510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr18:29079616-29080092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr18:30248585-30248131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
272, 36
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr18:40253122-40252645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr18:42608797-42608320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr18:50114409-50113929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr18:55555129-55555601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-465
               

               
Cow position:
               
chr18:9089238-9089708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 140
               

               
Conread position:
               
2-465
               

               
Cow position:
               
chr18:19320510-19320986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr18:28767899-28768372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
2-468
               

               
Cow position:
               
chr18:51756631-51757102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
2-470
               

               
Cow position:
               
chr18:4540340-4539871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-477
               

               
Cow position:
               
chr18:3159067-3158576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr18:7946911-7947413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 163
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:3190623-3191128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr18:54031236-54031753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 170
               

               
Conread position:
               
2-514
               

               
Cow position:
               
chr18:17324252-17324760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 115
               

               
Conread position:
               
2-572
               

               
Cow position:
               
chr18:1494822-1495426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
2-590
               

               
Cow position:
               
chr18:29065831-29065233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
246, 49
               

               
Conread position:
               
2-598
               

               
Cow position:
               
chr18:1144681-1144025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
55, 234
               

               
Conread position:
               
2-598
               

               
Cow position:
               
chr18:19645707-19646324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
2-598
               

               
Cow position:
               
chr18:50637930-50637325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
45, 165
               

               
Conread position:
               
3-157
               

               
Cow position:
               
chr18:33851761-33851918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
3-159
               

               
Cow position:
               
chr18:42223867-42224031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr18:29585732-29585567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr18:19310031-19309861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr18:16154963-16154785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr18:5536851-5537028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr18:6733093-6732915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr18:15678873-15679051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr18:28292226-28292047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 167
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr18:18990914-18990670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr18:16094758-16095002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 11
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr18:23802900-23803137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
215, 70
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr18:35637693-35637939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 166
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr18:4323083-4323331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 167
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr18:6046954-6046703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 170
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr18:52656725-52656972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr18:23700336-23700069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr18:36512507-36512775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr18:41837236-41836969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr18:43430878-43431145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr18:45168366-45168633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr18:16782124-16781848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr18:20329274-20328999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr18:23949877-23949600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr18:25924256-25924534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr18:28968409-28968130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr18:29862729-29862451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr18:17002194-17002475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr18:16378503-16378784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 167
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:45886709-45886404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 168
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr18:10574586-10574905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr18:28539854-28539536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 167
               

               
Conread position:
               
3-440
               

               
Cow position:
               
chr18:12118311-12117868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr18:16857665-16858132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr18:25006048-25005577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-463
               

               
Cow position:
               
chr18:9066250-9066702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 170
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr18:4432606-4433081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr18:27194386-27194841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
206, 47
               

               
Conread position:
               
3-468
               

               
Cow position:
               
chr18:36524668-36524203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
3-505
               

               
Cow position:
               
chr18:34052430-34051939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
266, 44
               

               
Conread position:
               
3-598
               

               
Cow position:
               
chr18:17004787-17005405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
4-168
               

               
Cow position:
               
chr18:51749387-51749219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr18:8624450-8624184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr18:4707752-4707478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 156
               

               
Conread position:
               
4-556
               

               
Cow position:
               
chr18:33274828-33275396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 244
               

               
Conread position:
               
5-159
               

               
Cow position:
               
chr18:19761040-19761203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
5-162
               

               
Cow position:
               
chr18:10097693-10097866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr18:23660845-23661110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr18:25626559-25626834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 156
               

               
Conread position:
               
5-461
               

               
Cow position:
               
chr18:16227102-16227558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
5-608
               

               
Cow position:
               
chr18:55589939-55589345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
5-610
               

               
Cow position:
               
chr18:19850210-19849590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 177
               

               
Conread position:
               
6-157
               

               
Cow position:
               
chr18:21184866-21185025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
6-159
               

               
Cow position:
               
chr18:25206761-25206601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
6-170
               

               
Cow position:
               
chr18:268513-268341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr18:43285606-43285775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 157
               

               
Conread position:
               
6-253
               

               
Cow position:
               
chr18:13877199-13876947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 169
               

               
Conread position:
               
6-270
               

               
Cow position:
               
chr18:11262499-11262758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
44, 137
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr18:23137680-23137394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 255
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr18:51679337-51679073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 163
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr18:39115629-39115219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 266
               

               
Conread position:
               
6-405
               

               
Cow position:
               
chr18:29387773-29388167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
6-433
               

               
Cow position:
               
chr18:49161920-49161463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 164
               

               
Conread position:
               
6-445
               

               
Cow position:
               
chr18:81299-81732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
6-450
               

               
Cow position:
               
chr18:33606167-33606621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:16418155-16417706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:21251531-21251988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:35012769-35012317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 112
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:51713173-51712702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
49, 163
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr18:30186382-30185894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 172
               

               
Conread position:
               
6-477
               

               
Cow position:
               
chr18:51691932-51691443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 179
               

               
Conread position:
               
6-512
               

               
Cow position:
               
chr18:7964767-7965291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
6-533
               

               
Cow position:
               
chr18:4672878-4673388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
280, 65
               

               
Conread position:
               
6-558
               

               
Cow position:
               
chr18:43284215-43283648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 159
               

               
Conread position:
               
6-594
               

               
Cow position:
               
chr18:4578959-4578343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
6-601
               

               
Cow position:
               
chr18:19193809-19193202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 159
               

               
Conread position:
               
6-603
               

               
Cow position:
               
chr18:20641942-20641329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
52, 140
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr18:26822480-26822743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr18:27428983-27429243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr18:16172734-16172461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 162
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr18:26306149-26306425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 166
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr18:54033579-54033848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 162
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr18:45981379-45981686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 160
               

               
Conread position:
               
7-329
               

               
Cow position:
               
chr18:8967541-8967866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr18:5190142-5189746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
50, 162
               

               
Conread position:
               
7-459
               

               
Cow position:
               
chr18:22396543-22396070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
51, 162
               

               
Conread position:
               
7-461
               

               
Cow position:
               
chr18:22121343-22120884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
7-509
               

               
Cow position:
               
chr18:51211704-51212238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
7-598
               

               
Cow position:
               
chr18:55119411-55120034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
8-170
               

               
Cow position:
               
chr18:1954986-1954817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 161
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr18:38157667-38157404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 161
               

               
Conread position:
               
8-436
               

               
Cow position:
               
chr18:26938525-26938959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
8-470
               

               
Cow position:
               
chr18:45104889-45104430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
8-498
               

               
Cow position:
               
chr18:44262153-44262674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
8-529
               

               
Cow position:
               
chr18:9974787-9974258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
8-533
               

               
Cow position:
               
chr18:37024018-37023466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
8-595
               

               
Cow position:
               
chr18:47183746-47183149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
8-602
               

               
Cow position:
               
chr18:14048260-14048836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 54
               

               
Conread position:
               
8-607
               

               
Cow position:
               
chr18:33299447-33300061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
8-608
               

               
Cow position:
               
chr18:50082694-50082103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
9-456
               

               
Cow position:
               
chr18:37021465-37021933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 159
               

               
Conread position:
               
9-460
               

               
Cow position:
               
chr18:11322128-11322596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
9-527
               

               
Cow position:
               
chr18:40758751-40759278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr18:24267302-24267073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 159
               

               
Conread position:
               
10-439
               

               
Cow position:
               
chr18:35075931-35076372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 149
               

               
Conread position:
               
10-461
               

               
Cow position:
               
chr18:55552505-55552968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
48, 158
               

               
Conread position:
               
11-271
               

               
Cow position:
               
chr18:5186599-5186341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
11-443
               

               
Cow position:
               
chr18:3098771-3098338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
43, 158
               

               
Conread position:
               
14-282
               

               
Cow position:
               
chr18:19640343-19640608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
14-366
               

               
Cow position:
               
chr18:27078403-27078741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
190, 32
               

               
Conread position:
               
14-460
               

               
Cow position:
               
chr18:6103558-6103097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
14-463
               

               
Cow position:
               
chr18:45570572-45571017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
15-608
               

               
Cow position:
               
chr18:7486797-7487413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
17-158
               

               
Cow position:
               
chr18:4103026-4103175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
29-159
               

               
Cow position:
               
chr18:36122990-36123122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
37-406
               

               
Cow position:
               
chr18:23447504-23447134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
46-449
               

               
Cow position:
               
chr18:52632835-52632418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 293
               

               
Conread position:
               
49-602
               

               
Cow position:
               
chr18:16842480-16841898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr18:27540356-27540539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
50-271
               

               
Cow position:
               
chr18:3416760-3416971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
50-451
               

               
Cow position:
               
chr18:1584617-1584240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
283, 94
               

               
Conread position:
               
51-282
               

               
Cow position:
               
chr18:8988938-8989156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
158, 101
               

               
Conread position:
               
51-282
               

               
Cow position:
               
chr18:33852444-33852661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
51-460
               

               
Cow position:
               
chr18:56362011-56361603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
158, 90
               

               
Conread position:
               
52-271
               

               
Cow position:
               
chr18:43393411-43393620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
151, 11
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr18:7969804-7970018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
52-277
               

               
Cow position:
               
chr18:41072461-41072674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
52-453
               

               
Cow position:
               
chr18:46581592-46581181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
52-558
               

               
Cow position:
               
chr18:45904301-45903790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
53-282
               

               
Cow position:
               
chr18:46321679-46321463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
53-454
               

               
Cow position:
               
chr18:21195748-21195347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 108
               

               
Conread position:
               
54-410
               

               
Cow position:
               
chr18:14480061-14480419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
55-159
               

               
Cow position:
               
chr18:37339289-37339185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
55-248
               

               
Cow position:
               
chr18:29484750-29484570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
148, 106
               

               
Conread position:
               
55-250
               

               
Cow position:
               
chr18:2864613-2864428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
55-317
               

               
Cow position:
               
chr18:8191577-8191302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
55-377
               

               
Cow position:
               
chr18:46108786-46108459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 106
               

               
Conread position:
               
55-424
               

               
Cow position:
               
chr18:35057943-35058304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
221, 18
               

               
Conread position:
               
55-453
               

               
Cow position:
               
chr18:19531296-19531701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 95
               

               
Conread position:
               
55-474
               

               
Cow position:
               
chr18:29768507-29768939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 105
               

               
Conread position:
               
55-522
               

               
Cow position:
               
chr18:21682375-21681900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 106
               

               
Conread position:
               
56-159
               

               
Cow position:
               
chr18:52388326-52388223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-160
               

               
Cow position:
               
chr18:21175723-21175826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
56-160
               

               
Cow position:
               
chr18:42080058-42079954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-161
               

               
Cow position:
               
chr18:23424473-23424578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-172
               

               
Cow position:
               
chr18:11869080-11868965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-174
               

               
Cow position:
               
chr18:19386883-19386999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
56-174
               

               
Cow position:
               
chr18:23052944-23053061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-174
               

               
Cow position:
               
chr18:54027537-54027653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr18:24635620-24635750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr18:36477746-36477872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-216
               

               
Cow position:
               
chr18:47777701-47777855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 105
               

               
Conread position:
               
56-226
               

               
Cow position:
               
chr18:35487689-35487509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
56-243
               

               
Cow position:
               
chr18:54274856-54275036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr18:4628325-4628139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-252
               

               
Cow position:
               
chr18:49227289-49227474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
56-268
               

               
Cow position:
               
chr18:21609217-21609014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
56-269
               

               
Cow position:
               
chr18:35337308-35337512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
147, 106
               

               
Conread position:
               
56-270
               

               
Cow position:
               
chr18:35818405-35818201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 85
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr18:23466393-23466599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr18:55547482-55547276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-274
               

               
Cow position:
               
chr18:23617057-23616849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
56-276
               

               
Cow position:
               
chr18:33895767-33895983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
129, 10
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr18:10040360-10040148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr18:27169003-27169217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 101
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr18:37509881-37510099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr18:44235792-44236010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr18:54656883-54657098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
153, 100
               

               
Conread position:
               
56-285
               

               
Cow position:
               
chr18:45902012-45901792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-317
               

               
Cow position:
               
chr18:27799939-27799677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
56-321
               

               
Cow position:
               
chr18:24293454-24293709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
214, 63
               

               
Conread position:
               
56-323
               

               
Cow position:
               
chr18:36346472-36346200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
56-343
               

               
Cow position:
               
chr18:32280892-32281169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
219, 84
               

               
Conread position:
               
56-352
               

               
Cow position:
               
chr18:56335188-56335493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr18:32860243-32860557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 40
               

               
Conread position:
               
56-382
               

               
Cow position:
               
chr18:5646837-5647172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
56-383
               

               
Cow position:
               
chr18:51179150-51178827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
212, 36
               

               
Conread position:
               
56-390
               

               
Cow position:
               
chr18:24342220-24342549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 81
               

               
Conread position:
               
56-391
               

               
Cow position:
               
chr18:43463825-43463475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
56-402
               

               
Cow position:
               
chr18:11368184-11367817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
119, 209
               

               
Conread position:
               
56-403
               

               
Cow position:
               
chr18:22065767-22065407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
56-410
               

               
Cow position:
               
chr18:13977268-13977622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-412
               

               
Cow position:
               
chr18:36445024-36445391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 66
               

               
Conread position:
               
56-431
               

               
Cow position:
               
chr18:33793298-33793675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
219, 106
               

               
Conread position:
               
56-434
               

               
Cow position:
               
chr18:32436527-32436141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 94
               

               
Conread position:
               
56-436
               

               
Cow position:
               
chr18:47314704-47314304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
56-444
               

               
Cow position:
               
chr18:6290379-6290767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
152, 20
               

               
Conread position:
               
56-450
               

               
Cow position:
               
chr18:34527513-34527108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
56-451
               

               
Cow position:
               
chr18:34755330-34754932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
150, 105
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr18:8316027-8316431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr18:24590725-24591125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr18:32755151-32755555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
56-455
               

               
Cow position:
               
chr18:22237361-22236956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 105
               

               
Conread position:
               
56-455
               

               
Cow position:
               
chr18:36336130-36335735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
56-457
               

               
Cow position:
               
chr18:26937321-26937713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
154, 106
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr18:17349596-17350002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr18:24599948-24599540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr18:43226355-43225947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 92
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr18:45646510-45646104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
217, 105
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr18:15911416-15911006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr18:23766826-23766410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
144, 50
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr18:31082745-31082348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
35, 190
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr18:22092383-22092772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
153, 20
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr18:18091827-18091411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr18:28794471-28794067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
148, 30
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr18:40196052-40196467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
148, 101
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr18:42747181-42747596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 189
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr18:50851733-50851330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 106
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr18:55022223-55021809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr18:56431235-56430834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 106
               

               
Conread position:
               
56-466
               

               
Cow position:
               
chr18:26001768-26001345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 50
               

               
Conread position:
               
56-473
               

               
Cow position:
               
chr18:4765701-4765276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
98, 160
               

               
Conread position:
               
56-477
               

               
Cow position:
               
chr18:29357043-29356605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
56-479
               

               
Cow position:
               
chr18:54574718-54574296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 30
               

               
Conread position:
               
56-488
               

               
Cow position:
               
chr18:38606830-38607255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 106
               

               
Conread position:
               
56-490
               

               
Cow position:
               
chr18:13508132-13507704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 116
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr18:11376965-11377408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
198, 90
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr18:21938949-21939398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
219, 97
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr18:36458528-36458975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-499
               

               
Cow position:
               
chr18:14815741-14815303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 106
               

               
Conread position:
               
56-502
               

               
Cow position:
               
chr18:51500483-51500027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
152, 77
               

               
Conread position:
               
56-504
               

               
Cow position:
               
chr18:34621770-34621316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
163, 106
               

               
Conread position:
               
56-551
               

               
Cow position:
               
chr18:25003283-25002788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
56-557
               

               
Cow position:
               
chr18:39002201-39001710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 104
               

               
Conread position:
               
56-558
               

               
Cow position:
               
chr18:16134714-16134205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
56-593
               

               
Cow position:
               
chr18:40892866-40893417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 106
               

               
Conread position:
               
56-593
               

               
Cow position:
               
chr18:51538087-51537544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 77
               

               
Conread position:
               
56-597
               

               
Cow position:
               
chr18:4039771-4040316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 95
               

               
Conread position:
               
56-597
               

               
Cow position:
               
chr18:9010326-9010871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
203, 105
               

               
Conread position:
               
56-598
               

               
Cow position:
               
chr18:45961665-45961124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 104
               

               
Conread position:
               
56-604
               

               
Cow position:
               
chr18:31672907-31672345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
56-608
               

               
Cow position:
               
chr18:40203197-40202653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
56-608
               

               
Cow position:
               
chr18:55697421-55696871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-609
               

               
Cow position:
               
chr18:50993679-50993129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
57-159
               

               
Cow position:
               
chr18:36097812-36097914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-164
               

               
Cow position:
               
chr18:21106557-21106449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
57-176
               

               
Cow position:
               
chr18:21773104-21773223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
57-233
               

               
Cow position:
               
chr18:10115032-10115218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
57-250
               

               
Cow position:
               
chr18:52243536-52243723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
57-282
               

               
Cow position:
               
chr18:6322334-6322550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
164, 104
               

               
Conread position:
               
57-358
               

               
Cow position:
               
chr18:21721686-21721377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
5, 105
               

               
Conread position:
               
57-436
               

               
Cow position:
               
chr18:1859628-1859242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
57-454
               

               
Cow position:
               
chr18:21528001-21528397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
221, 12
               

               
Conread position:
               
57-477
               

               
Cow position:
               
chr18:30360525-30360130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
147, 104
               

               
Conread position:
               
58-250
               

               
Cow position:
               
chr18:21751899-21752083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
58-315
               

               
Cow position:
               
chr18:26844050-26843797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
213, 100
               

               
Conread position:
               
58-559
               

               
Cow position:
               
chr18:12241872-12242385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
59-183
               

               
Cow position:
               
chr18:11166504-11166635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
60-339
               

               
Cow position:
               
chr18:13212853-13213124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
215, 6
               

               
Conread position:
               
60-412
               

               
Cow position:
               
chr18:19977380-19977027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
197, 98
               

               
Conread position:
               
61-428
               

               
Cow position:
               
chr18:40337384-40337000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 194
               

               
Conread position:
               
63-285
               

               
Cow position:
               
chr18:4535383-4535172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
63-369
               

               
Cow position:
               
chr18:50927336-50927648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
64-315
               

               
Cow position:
               
chr18:35535683-35535430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
195, 96
               

               
Conread position:
               
64-394
               

               
Cow position:
               
chr18:11191025-11191365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
64-452
               

               
Cow position:
               
chr18:56464270-56463876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
115, 46
               

               
Conread position:
               
65-419
               

               
Cow position:
               
chr18:26286517-26286871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
204, 10
               

               
Conread position:
               
65-461
               

               
Cow position:
               
chr18:39662379-39662780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
66-459
               

               
Cow position:
               
chr18:20174526-20174130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
143, 96
               

               
Conread position:
               
66-606
               

               
Cow position:
               
chr18:47511598-47512170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
139, 94
               

               
Conread position:
               
67-465
               

               
Cow position:
               
chr18:5486856-5487251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
137, 94
               

               
Conread position:
               
67-598
               

               
Cow position:
               
chr18:29796828-29796281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 91
               

               
Conread position:
               
68-405
               

               
Cow position:
               
chr18:18340347-18340021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
138, 93
               

               
Conread position:
               
68-598
               

               
Cow position:
               
chr18:14586870-14586312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
136, 93
               

               
Conread position:
               
72-494
               

               
Cow position:
               
chr18:4515616-4516069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 195
               

               
Conread position:
               
73-282
               

               
Cow position:
               
chr18:21810670-21810472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
136, 89
               

               
Conread position:
               
73-397
               

               
Cow position:
               
chr18:5570771-5571096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
186, 36
               

               
Conread position:
               
73-497
               

               
Cow position:
               
chr18:35472326-35471886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 87
               

               
Conread position:
               
78-460
               

               
Cow position:
               
chr18:55692438-55692816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
179, 83
               

               
Conread position:
               
78-461
               

               
Cow position:
               
chr18:29371483-29371868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 83
               

               
Conread position:
               
79-460
               

               
Cow position:
               
chr18:15881237-15880844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 78
               

               
Conread position:
               
81-597
               

               
Cow position:
               
chr18:25971035-25970499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 191
               

               
Conread position:
               
83-433
               

               
Cow position:
               
chr18:41270708-41271059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
174, 78
               

               
Conread position:
               
83-461
               

               
Cow position:
               
chr18:12776152-12775783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 75
               

               
Conread position:
               
84-361
               

               
Cow position:
               
chr18:49665535-49665255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
191, 76
               

               
Conread position:
               
85-381
               

               
Cow position:
               
chr18:9818463-9818761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
190, 69
               

               
Conread position:
               
85-460
               

               
Cow position:
               
chr18:11831766-11832120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
85-498
               

               
Cow position:
               
chr18:19273493-19273052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
85, 117
               

               
Conread position:
               
87-381
               

               
Cow position:
               
chr18:3073541-3073241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
133, 42
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr18:11671435-11671619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
88-320
               

               
Cow position:
               
chr18:36769317-36769078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
76, 172
               

               
Conread position:
               
89-273
               

               
Cow position:
               
chr18:23429410-23429584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
91-315
               

               
Cow position:
               
chr18:49660411-49660189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 70
               

               
Conread position:
               
91-457
               

               
Cow position:
               
chr18:10575741-10576103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
92-498
               

               
Cow position:
               
chr18:4182556-4182143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
186, 25
               

               
Conread position:
               
93-494
               

               
Cow position:
               
chr18:29058861-29058462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
164, 60
               

               
Conread position:
               
93-605
               

               
Cow position:
               
chr18:21574630-21575133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
94-284
               

               
Cow position:
               
chr18:18627696-18627515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
94-329
               

               
Cow position:
               
chr18:45395625-45395872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 68
               

               
Conread position:
               
95-512
               

               
Cow position:
               
chr18:2774954-2774553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
180, 66
               

               
Conread position:
               
96-383
               

               
Cow position:
               
chr18:48407424-48407716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
97-461
               

               
Cow position:
               
chr18:32121425-32121066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
178, 10
               

               
Conread position:
               
100-329
               

               
Cow position:
               
chr18:48241580-48241801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
174, 60
               

               
Conread position:
               
101-461
               

               
Cow position:
               
chr18:51826930-51827282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
174, 61
               

               
Conread position:
               
101-601
               

               
Cow position:
               
chr18:4666569-4666084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
102-315
               

               
Cow position:
               
chr18:43896601-43896394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
171, 59
               

               
Conread position:
               
105-598
               

               
Cow position:
               
chr18:35797264-35797759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 57
               

               
Conread position:
               
110-461
               

               
Cow position:
               
chr18:56159107-56159463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
114-349
               

               
Cow position:
               
chr18:11811629-11811861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
117-380
               

               
Cow position:
               
chr18:11233084-11233355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
121-498
               

               
Cow position:
               
chr18:44802224-44801845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
101, 39
               

               
Conread position:
               
122-593
               

               
Cow position:
               
chr18:51298140-51298623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
131-428
               

               
Cow position:
               
chr18:10516802-10517098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
134-608
               

               
Cow position:
               
chr18:29958474-29958003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
141, 28
               

               
Conread position:
               
149-436
               

               
Cow position:
               
chr18:52658096-52658388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
156-514
               

               
Cow position:
               
chr18:21175865-21176252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
158-498
               

               
Cow position:
               
chr18:46048452-46048796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
159-451
               

               
Cow position:
               
chr18:26006494-26006793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
159-602
               

               
Cow position:
               
chr18:10101180-10101638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 99
               

               
Conread position:
               
160-596
               

               
Cow position:
               
chr18:3422409-3422852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 140
               

               
Conread position:
               
163-494
               

               
Cow position:
               
chr18:16258560-16258900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 96
               

               
Conread position:
               
163-602
               

               
Cow position:
               
chr18:51272048-51271592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 160
               

               
Conread position:
               
164-271
               

               
Cow position:
               
chr18:55640130-55640021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
164-392
               

               
Cow position:
               
chr18:23808180-23807939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
164-460
               

               
Cow position:
               
chr18:36477891-36478203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
164-461
               

               
Cow position:
               
chr18:20271327-20271018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 155
               

               
Conread position:
               
164-498
               

               
Cow position:
               
chr18:25647556-25647208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
164-557
               

               
Cow position:
               
chr18:23424621-23425026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
164-580
               

               
Cow position:
               
chr18:43114227-43113818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
164-583
               

               
Cow position:
               
chr18:42060769-42061209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
164-603
               

               
Cow position:
               
chr18:20127411-20126954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
164-610
               

               
Cow position:
               
chr18:33843369-33842926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
165-390
               

               
Cow position:
               
chr18:47931166-47930933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
167-436
               

               
Cow position:
               
chr18:11166675-11166957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
167-464
               

               
Cow position:
               
chr18:4649039-4648742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
170-498
               

               
Cow position:
               
chr18:15025378-15025716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
171-597
               

               
Cow position:
               
chr18:49100672-49100219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
172-458
               

               
Cow position:
               
chr18:40694677-40694964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
172-598
               

               
Cow position:
               
chr18:51587838-51587399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
174-598
               

               
Cow position:
               
chr18:34325255-34324801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
176-468
               

               
Cow position:
               
chr18:47517503-47517205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 82
               

               
Conread position:
               
177-498
               

               
Cow position:
               
chr18:50381963-50382292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
178-346
               

               
Cow position:
               
chr18:5742729-5742553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 153
               

               
Conread position:
               
178-458
               

               
Cow position:
               
chr18:23317396-23317110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
178-498
               

               
Cow position:
               
chr18:6610151-6609813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 220
               

               
Conread position:
               
178-595
               

               
Cow position:
               
chr18:716100-716518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
179-458
               

               
Cow position:
               
chr18:38794152-38793888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
179-475
               

               
Cow position:
               
chr18:268103-267800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
179-598
               

               
Cow position:
               
chr18:26335108-26334657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
179-607
               

               
Cow position:
               
chr18:18919245-18918787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
180-457
               

               
Cow position:
               
chr18:56181746-56181463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
180-567
               

               
Cow position:
               
chr18:51412083-51412463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
180-601
               

               
Cow position:
               
chr18:51406194-51405747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
181-433
               

               
Cow position:
               
chr18:16847408-16847668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
181-592
               

               
Cow position:
               
chr18:31586654-31586233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
182-529
               

               
Cow position:
               
chr18:22214197-22214568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
184-419
               

               
Cow position:
               
chr18:39185322-39185571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
184-456
               

               
Cow position:
               
chr18:23652900-23652624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
184-491
               

               
Cow position:
               
chr18:26535803-26535471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
184-498
               

               
Cow position:
               
chr18:36123266-36123578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
184-529
               

               
Cow position:
               
chr18:25282842-25282474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
184-591
               

               
Cow position:
               
chr18:5766142-5766569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
184-593
               

               
Cow position:
               
chr18:51486742-51486324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
186-607
               

               
Cow position:
               
chr18:30794148-30794571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
187-532
               

               
Cow position:
               
chr18:17334700-17334338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
187-598
               

               
Cow position:
               
chr18:29080545-29080960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
187-608
               

               
Cow position:
               
chr18:329557-329134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
189-456
               

               
Cow position:
               
chr18:21203541-21203273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
189-592
               

               
Cow position:
               
chr18:3166770-3166349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
189-593
               

               
Cow position:
               
chr18:39503967-39503557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
189-603
               

               
Cow position:
               
chr18:47525124-47525564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
189-604
               

               
Cow position:
               
chr18:50700383-50700838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 447
               

               
Conread position:
               
190-433
               

               
Cow position:
               
chr18:48290719-48290466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
190-592
               

               
Cow position:
               
chr18:249084-248672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
191-460
               

               
Cow position:
               
chr18:39875539-39875259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
193-581
               

               
Cow position:
               
chr18:16726368-16726780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
194-563
               

               
Cow position:
               
chr18:32773602-32773992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
195-490
               

               
Cow position:
               
chr18:15614124-15613824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
198-602
               

               
Cow position:
               
chr18:12058744-12059165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
200-460
               

               
Cow position:
               
chr18:48453422-48453688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
204-477
               

               
Cow position:
               
chr18:23476940-23476668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
209-498
               

               
Cow position:
               
chr18:23360368-23360672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
211-605
               

               
Cow position:
               
chr18:22411876-22411457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
214-593
               

               
Cow position:
               
chr18:19363676-19364076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
217-459
               

               
Cow position:
               
chr18:21205113-21205364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
224-608
               

               
Cow position:
               
chr18:34021144-34021548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
230-605
               

               
Cow position:
               
chr18:6157682-6158064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
236-455
               

               
Cow position:
               
chr18:15340674-15340451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
236-545
               

               
Cow position:
               
chr18:43020624-43020309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
236-577
               

               
Cow position:
               
chr18:24856079-24855716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
237-603
               

               
Cow position:
               
chr18:44493704-44493332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr18:219100-219351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
268-602
               

               
Cow position:
               
chr18:5072606-5072245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
274-460
               

               
Cow position:
               
chr18:33007870-33008063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
274-602
               

               
Cow position:
               
chr18:15831768-15831450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
274-608
               

               
Cow position:
               
chr18:23715075-23714711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
279-603
               

               
Cow position:
               
chr18:46321171-46320829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 285
               

               
Conread position:
               
288-497
               

               
Cow position:
               
chr18:23487851-23488064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
288-498
               

               
Cow position:
               
chr18:43555699-43555480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
292-591
               

               
Cow position:
               
chr18:30586390-30586076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
297-593
               

               
Cow position:
               
chr18:5755816-5756122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
298-467
               

               
Cow position:
               
chr18:4952373-4952199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
300-601
               

               
Cow position:
               
chr18:24364209-24363911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
301-605
               

               
Cow position:
               
chr18:9154723-9155046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
310-593
               

               
Cow position:
               
chr18:32908899-32909185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
6, 96
               

               
Conread position:
               
315-553
               

               
Cow position:
               
chr18:20423120-20422875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 142
               

               
Conread position:
               
320-578
               

               
Cow position:
               
chr18:21706319-21706055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
338-533
               

               
Cow position:
               
chr18:4871953-4872147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
338-542
               

               
Cow position:
               
chr18:35359850-35360060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
122, 55
               

               
Conread position:
               
339-602
               

               
Cow position:
               
chr18:31711687-31711407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 274
               

               
Conread position:
               
347-593
               

               
Cow position:
               
chr18:11362140-11362393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 199
               

               
Conread position:
               
350-603
               

               
Cow position:
               
chr18:16448447-16448692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
359-601
               

               
Cow position:
               
chr18:15689185-15689433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
359-603
               

               
Cow position:
               
chr18:37331626-37331374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
361-603
               

               
Cow position:
               
chr18:38126548-38126296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
366-603
               

               
Cow position:
               
chr18:1190813-1190569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
371-598
               

               
Cow position:
               
chr18:2438853-2438618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 198
               

               
Conread position:
               
380-580
               

               
Cow position:
               
chr18:44400369-44400577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
380-605
               

               
Cow position:
               
chr18:26372842-26373077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
386-601
               

               
Cow position:
               
chr18:43711974-43712198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
398-608
               

               
Cow position:
               
chr18:29949694-29949902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
407-591
               

               
Cow position:
               
chr18:43555127-43554940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 144
               

               
Conread position:
               
417-598
               

               
Cow position:
               
chr18:21139859-21140051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
430-598
               

               
Cow position:
               
chr18:48036789-48036966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
32, 115
               
Show alignments to all cow chromosomes.