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Cow genome map

           
Conread name:
           
Ss1.1-Emb1-C0005213_E07.5
        

               
Conread position:
               
1-257
               

               
Cow position:
               
chr24:39217086-39216830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 168
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr24:11311655-11311384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 170
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr24:20024151-20024623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 163
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr24:27632928-27633545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 282
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr24:25111117-25111284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr24:28601191-28601026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chr24:18604723-18604886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-166
               

               
Cow position:
               
chr24:34761378-34761549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
48, 169
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr24:11064410-11064585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr24:28290026-28289850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr24:17566716-17566892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr24:18234645-18234824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr24:18399575-18399399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr24:35815613-35815434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr24:10243691-10243501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr24:40184113-40184309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr24:40789724-40789515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr24:24818725-24818517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr24:26795287-26795526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr24:38296927-38297174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr24:4649407-4649159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr24:5990317-5990069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 167
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr24:12696253-12696005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr24:14353216-14353464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr24:15372659-15372909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 150
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr24:18740498-18740232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr24:27153782-27153516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr24:30766408-30766678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:5607589-5607329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:6325501-6325233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:8754386-8754654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:11080912-11080658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
201, 32
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:12447362-12447616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
201, 32
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:13117503-13117771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 117
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:13185823-13185558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 165
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:13319584-13319317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:15084450-15084718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:15810291-15810023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:17161107-17160839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:24002518-24002783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:25372973-25373241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 162
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:26412917-26413185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:33621946-33621678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:38655556-38655284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 173
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr24:27732622-27732340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 173
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr24:3851465-3851743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr24:6067476-6067201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr24:11104281-11104003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr24:20604620-20604898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr24:25710168-25709875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 271
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr24:32455968-32456244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 148
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr24:33639627-33639350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr24:39066992-39066714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr24:39729879-39729598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr24:31308966-31309272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 176
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr24:22187574-22187261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
46, 169
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr24:8814469-8814135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr24:33379595-33379917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr24:38479407-38479110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
255, 48
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr24:2731039-2730649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
2-378
               

               
Cow position:
               
chr24:27763343-27763719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr24:14279427-14279822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr24:39441017-39440602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
56, 154
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chr24:40056179-40055762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 157
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr24:7782260-7781813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr24:16541304-16540872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr24:34271060-34271507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-440
               

               
Cow position:
               
chr24:29360437-29360007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
59, 166
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr24:36555288-36554839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
57, 166
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr24:39258683-39259157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
2-449
               

               
Cow position:
               
chr24:16267311-16267770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
48, 270
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr24:9070895-9070440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr24:39219302-39218839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 164
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:4637549-4637087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:4666951-4667416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:6019100-6018635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:8776846-8777311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:9044826-9044360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:9365930-9365464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:10035173-10034707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:10655482-10655948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:12518684-12519150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:13042122-13041656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:17455918-17456384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:27760392-27760858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:28832991-28832525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:29097602-29097137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr24:38897006-38896540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr24:599822-599357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr24:1841000-1840533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr24:2118741-2119206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr24:6160544-6160086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 168
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr24:15296986-15297452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr24:18266624-18266159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr24:21211047-21210581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr24:36326228-36326695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr24:39253795-39254262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr24:42693868-42693401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-455
               

               
Cow position:
               
chr24:14249712-14249244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-455
               

               
Cow position:
               
chr24:36174234-36173779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 48
               

               
Conread position:
               
2-457
               

               
Cow position:
               
chr24:11215517-11215047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:207135-206667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:5929649-5930116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:7596692-7596222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:7986345-7985874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:8331627-8331167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:11152220-11152689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:12377246-12376776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:12701214-12700743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:15026572-15026101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:17188401-17187930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:20368432-20368905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:27905968-27906445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:28494614-28495085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:35877390-35876920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr24:36308447-36308916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr24:13625847-13626291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
202, 32
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr24:6141416-6140941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr24:12293564-12294038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr24:27290416-27290881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
53, 182
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr24:29596266-29595799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr24:32693245-32693729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
59, 159
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr24:38814514-38814977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 178
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr24:39160001-39159537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr24:28062487-28062963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:192957-193431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:6020208-6019733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:6436333-6436806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:13178875-13178398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:14124630-14125100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:20221060-20221533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:22795426-22795899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:37142178-37142655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:40381967-40381492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:40427821-40427351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr24:43906729-43907202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr24:30484394-30483929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
2-472
               

               
Cow position:
               
chr24:32609174-32609669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
53, 116
               

               
Conread position:
               
2-476
               

               
Cow position:
               
chr24:7001528-7001040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
2-485
               

               
Cow position:
               
chr24:23616235-23616736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr24:31816094-31816631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
59, 280
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr24:5141472-5142006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 169
               

               
Conread position:
               
2-518
               

               
Cow position:
               
chr24:17412286-17412804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 144
               

               
Conread position:
               
2-536
               

               
Cow position:
               
chr24:12264157-12263618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
2-598
               

               
Cow position:
               
chr24:6149573-6150167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
2-598
               

               
Cow position:
               
chr24:27809719-27810325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
45, 165
               

               
Conread position:
               
2-607
               

               
Cow position:
               
chr24:28336001-28335396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 125
               

               
Conread position:
               
3-153
               

               
Cow position:
               
chr24:7744132-7744290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
3-158
               

               
Cow position:
               
chr24:31293813-31293661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
3-161
               

               
Cow position:
               
chr24:9087931-9087765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr24:13373636-13373466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 111
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr24:14146003-14145845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr24:36780288-36780466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr24:144479-144296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr24:16962778-16962573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 156
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr24:33291632-33291400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr24:14760770-14761013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 167
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr24:9550130-9550376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr24:19679413-19679659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr24:19837040-19837285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
55, 165
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr24:19886099-19886344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
55, 165
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr24:12503935-12504181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr24:29073136-29072889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr24:41670731-41670487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr24:27593631-27593376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 167
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr24:15793144-15792883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr24:1862026-1861759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr24:11940905-11941172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr24:16654133-16653865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr24:17544091-17543824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr24:22975677-22975944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr24:30870102-30869839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 162
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr24:29191155-29191421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr24:40466542-40466272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
55, 167
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr24:12090843-12091121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 160
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr24:16558142-16557865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr24:18222623-18222346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 160
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr24:35823056-35822779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 160
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr24:40035223-40034946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr24:32740058-32739792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr24:27503044-27502731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr24:19815543-19815216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 160
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr24:27270337-27270716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr24:38266728-38267147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 166
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr24:25991622-25991202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 231
               

               
Conread position:
               
3-453
               

               
Cow position:
               
chr24:22954412-22954877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr24:3163342-3163810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr24:31067183-31066717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr24:23034206-23034682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 167
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr24:31302562-31303027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
3-479
               

               
Cow position:
               
chr24:32359273-32358792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
3-558
               

               
Cow position:
               
chr24:33943941-33944521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 31
               

               
Conread position:
               
4-608
               

               
Cow position:
               
chr24:34564667-34565275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
5-162
               

               
Cow position:
               
chr24:29170519-29170684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr24:33428449-33428625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr24:22193269-22193531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
5-271
               

               
Cow position:
               
chr24:27852521-27852256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 164
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr24:35572030-35572302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr24:38593189-38593464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 164
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr24:36722274-36722583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
5-436
               

               
Cow position:
               
chr24:27148950-27149384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 163
               

               
Conread position:
               
5-454
               

               
Cow position:
               
chr24:12697540-12697076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr24:28353702-28354164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
5-498
               

               
Cow position:
               
chr24:202090-201584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 163
               

               
Conread position:
               
5-498
               

               
Cow position:
               
chr24:29679764-29679260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
5-602
               

               
Cow position:
               
chr24:11839723-11840364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
56, 163
               

               
Conread position:
               
5-608
               

               
Cow position:
               
chr24:36800930-36801547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 230
               

               
Conread position:
               
6-158
               

               
Cow position:
               
chr24:25424553-25424709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
6-169
               

               
Cow position:
               
chr24:27889363-27889191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
6-178
               

               
Cow position:
               
chr24:18331229-18331413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 168
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr24:6450076-6450274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
6-250
               

               
Cow position:
               
chr24:45216571-45216323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
51, 142
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr24:43506968-43506709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 162
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr24:16610906-16610636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 163
               

               
Conread position:
               
6-316
               

               
Cow position:
               
chr24:15666866-15666544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
52, 163
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr24:18025420-18025095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
6-440
               

               
Cow position:
               
chr24:24137308-24136872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr24:18970960-18970499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
6-463
               

               
Cow position:
               
chr24:32370373-32369903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 170
               

               
Conread position:
               
6-498
               

               
Cow position:
               
chr24:24250268-24250775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 80
               

               
Conread position:
               
6-498
               

               
Cow position:
               
chr24:43432323-43432843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 136
               

               
Conread position:
               
6-533
               

               
Cow position:
               
chr24:18742026-18741479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 136
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr24:6413351-6413614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr24:21769995-21770301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
7-460
               

               
Cow position:
               
chr24:814717-814252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 154
               

               
Conread position:
               
7-460
               

               
Cow position:
               
chr24:44987828-44987366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
8-181
               

               
Cow position:
               
chr24:27608596-27608414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
47, 163
               

               
Conread position:
               
8-183
               

               
Cow position:
               
chr24:23695378-23695195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
8-250
               

               
Cow position:
               
chr24:32070208-32070458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr24:9901247-9901509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 161
               

               
Conread position:
               
8-341
               

               
Cow position:
               
chr24:28689263-28689594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr24:40974541-40974940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 255
               

               
Conread position:
               
8-405
               

               
Cow position:
               
chr24:16557108-16556683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr24:17105017-17104561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr24:18113333-18113804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
8-470
               

               
Cow position:
               
chr24:28303804-28303345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
8-597
               

               
Cow position:
               
chr24:27874152-27874748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
9-153
               

               
Cow position:
               
chr24:19804006-19804158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
9-273
               

               
Cow position:
               
chr24:31770357-31770630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 213
               

               
Conread position:
               
9-282
               

               
Cow position:
               
chr24:16993996-16993726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
10-331
               

               
Cow position:
               
chr24:33239002-33238673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
48, 161
               

               
Conread position:
               
10-463
               

               
Cow position:
               
chr24:6341714-6342191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
10-478
               

               
Cow position:
               
chr24:25524618-25525068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
10-607
               

               
Cow position:
               
chr24:30545337-30544705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 275
               

               
Conread position:
               
10-609
               

               
Cow position:
               
chr24:17860728-17860075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
11-269
               

               
Cow position:
               
chr24:37037163-37037421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
11-409
               

               
Cow position:
               
chr24:20970243-20969842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 158
               

               
Conread position:
               
11-454
               

               
Cow position:
               
chr24:29788409-29787951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
11-466
               

               
Cow position:
               
chr24:27052942-27052478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 143
               

               
Conread position:
               
14-268
               

               
Cow position:
               
chr24:2391743-2391996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 155
               

               
Conread position:
               
14-453
               

               
Cow position:
               
chr24:16475348-16475800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
14-460
               

               
Cow position:
               
chr24:31811739-31812198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
14-596
               

               
Cow position:
               
chr24:15247073-15246484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
17-464
               

               
Cow position:
               
chr24:38488406-38488868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
41, 152
               

               
Conread position:
               
18-271
               

               
Cow position:
               
chr24:42835367-42835619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
18-558
               

               
Cow position:
               
chr24:19466377-19465800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 151
               

               
Conread position:
               
36-167
               

               
Cow position:
               
chr24:39804570-39804699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
36-349
               

               
Cow position:
               
chr24:32014706-32015024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
38-174
               

               
Cow position:
               
chr24:28216430-28216565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
44-384
               

               
Cow position:
               
chr24:6071188-6071532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
213, 109
               

               
Conread position:
               
44-603
               

               
Cow position:
               
chr24:42943556-42942957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr24:16844738-16844489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
48-497
               

               
Cow position:
               
chr24:28067359-28067792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 114
               

               
Conread position:
               
48-601
               

               
Cow position:
               
chr24:14337324-14337889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 105
               

               
Conread position:
               
49-327
               

               
Cow position:
               
chr24:36730069-36730372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
101, 189
               

               
Conread position:
               
49-364
               

               
Cow position:
               
chr24:32668873-32669190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
50-608
               

               
Cow position:
               
chr24:41985561-41986160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 353
               

               
Conread position:
               
51-271
               

               
Cow position:
               
chr24:16993723-16993512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
152, 110
               

               
Conread position:
               
51-282
               

               
Cow position:
               
chr24:25706236-25706013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
51-598
               

               
Cow position:
               
chr24:28279210-28279780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
52-361
               

               
Cow position:
               
chr24:27096258-27096593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
53-401
               

               
Cow position:
               
chr24:19658146-19658508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
151, 108
               

               
Conread position:
               
55-171
               

               
Cow position:
               
chr24:41063393-41063509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
55-174
               

               
Cow position:
               
chr24:27564094-27563973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
55-174
               

               
Cow position:
               
chr24:43449212-43449093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 107
               

               
Conread position:
               
55-282
               

               
Cow position:
               
chr24:32213069-32212849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
154, 106
               

               
Conread position:
               
55-323
               

               
Cow position:
               
chr24:13238011-13238272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
55-416
               

               
Cow position:
               
chr24:3631117-3631476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
55-452
               

               
Cow position:
               
chr24:43635033-43635439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
55-461
               

               
Cow position:
               
chr24:35986110-35985720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
152, 99
               

               
Conread position:
               
55-598
               

               
Cow position:
               
chr24:28721481-28722053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 106
               

               
Conread position:
               
56-153
               

               
Cow position:
               
chr24:6416278-6416375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-159
               

               
Cow position:
               
chr24:15617713-15617816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-168
               

               
Cow position:
               
chr24:28343844-28343957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
56-180
               

               
Cow position:
               
chr24:44074924-44075047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr24:24310568-24310694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
56-216
               

               
Cow position:
               
chr24:27039484-27039636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 104
               

               
Conread position:
               
56-232
               

               
Cow position:
               
chr24:16055931-16055755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
149, 103
               

               
Conread position:
               
56-233
               

               
Cow position:
               
chr24:39607988-39607806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr24:27754298-27754482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr24:38588710-38588896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr24:41241786-41241979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
56-267
               

               
Cow position:
               
chr24:32419625-32419827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr24:274238-274032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr24:14320054-14319847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr24:15881019-15881224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr24:17993072-17992867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr24:21104581-21104786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr24:35066861-35066655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 106
               

               
Conread position:
               
56-273
               

               
Cow position:
               
chr24:6080404-6080612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
167, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr24:13173554-13173336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
153, 101
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr24:17720488-17720272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 104
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr24:32360926-32360710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
154, 105
               

               
Conread position:
               
56-284
               

               
Cow position:
               
chr24:5130695-5130476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-317
               

               
Cow position:
               
chr24:40518681-40518424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
56-327
               

               
Cow position:
               
chr24:8810709-8810986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
56-335
               

               
Cow position:
               
chr24:37975467-37975191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 65
               

               
Conread position:
               
56-362
               

               
Cow position:
               
chr24:2993328-2993012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
131, 105
               

               
Conread position:
               
56-363
               

               
Cow position:
               
chr24:16625896-16625593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
138, 32
               

               
Conread position:
               
56-368
               

               
Cow position:
               
chr24:39238400-39238714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
196, 94
               

               
Conread position:
               
56-381
               

               
Cow position:
               
chr24:11006815-11007151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
56-397
               

               
Cow position:
               
chr24:21264904-21264562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
192, 105
               

               
Conread position:
               
56-401
               

               
Cow position:
               
chr24:6340620-6340960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
147, 17
               

               
Conread position:
               
56-404
               

               
Cow position:
               
chr24:39492899-39493247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 92
               

               
Conread position:
               
56-405
               

               
Cow position:
               
chr24:18075741-18076101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
85, 103
               

               
Conread position:
               
56-425
               

               
Cow position:
               
chr24:37205271-37204901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 20
               

               
Conread position:
               
56-433
               

               
Cow position:
               
chr24:11876486-11876870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
152, 70
               

               
Conread position:
               
56-434
               

               
Cow position:
               
chr24:27185564-27185949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
147, 106
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr24:17251864-17251460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
56-455
               

               
Cow position:
               
chr24:18257468-18257072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-455
               

               
Cow position:
               
chr24:41333275-41332870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr24:11748201-11747804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr24:14913935-14913538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr24:37386756-37386338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 202
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr24:38643238-38643638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
217, 104
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr24:17999474-17999849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr24:28690299-28690694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr24:29180503-29180898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 105
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr24:33098885-33098464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 99
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr24:42581229-42580830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr24:5931471-5931880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
56-477
               

               
Cow position:
               
chr24:44054537-44054138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
56-482
               

               
Cow position:
               
chr24:20862360-20861929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
56-489
               

               
Cow position:
               
chr24:5849805-5849352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 106
               

               
Conread position:
               
56-490
               

               
Cow position:
               
chr24:32205194-32204750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
56-492
               

               
Cow position:
               
chr24:25245640-25246083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr24:40129714-40130182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 157
               

               
Conread position:
               
56-499
               

               
Cow position:
               
chr24:25229473-25229010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
21, 211
               

               
Conread position:
               
56-502
               

               
Cow position:
               
chr24:8021175-8021604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
56-509
               

               
Cow position:
               
chr24:30235480-30235934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
148, 104
               

               
Conread position:
               
56-518
               

               
Cow position:
               
chr24:27683835-27683379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
149, 78
               

               
Conread position:
               
56-531
               

               
Cow position:
               
chr24:2674934-2675402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
56-553
               

               
Cow position:
               
chr24:1272268-1271777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 106
               

               
Conread position:
               
56-565
               

               
Cow position:
               
chr24:43363965-43364481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
56-577
               

               
Cow position:
               
chr24:25677635-25678160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
56-593
               

               
Cow position:
               
chr24:35568791-35569324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 119
               

               
Conread position:
               
56-598
               

               
Cow position:
               
chr24:17980821-17981342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
56-601
               

               
Cow position:
               
chr24:15508933-15508388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 32
               

               
Conread position:
               
56-605
               

               
Cow position:
               
chr24:27844918-27844350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 105
               

               
Conread position:
               
56-608
               

               
Cow position:
               
chr24:7917767-7917192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
196, 105
               

               
Conread position:
               
56-609
               

               
Cow position:
               
chr24:32054273-32054831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
56-609
               

               
Cow position:
               
chr24:32158665-32158106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 132
               

               
Conread position:
               
56-610
               

               
Cow position:
               
chr24:32759183-32758594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 216
               

               
Conread position:
               
57-250
               

               
Cow position:
               
chr24:32854141-32854326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
148, 104
               

               
Conread position:
               
57-285
               

               
Cow position:
               
chr24:4616143-4615919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
147, 98
               

               
Conread position:
               
57-348
               

               
Cow position:
               
chr24:42816583-42816888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
57-460
               

               
Cow position:
               
chr24:17763661-17763256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
57-462
               

               
Cow position:
               
chr24:16232648-16232234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 119
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr24:29673122-29673535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
147, 104
               

               
Conread position:
               
57-484
               

               
Cow position:
               
chr24:15802745-15803188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
57-498
               

               
Cow position:
               
chr24:18485397-18484943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
147, 104
               

               
Conread position:
               
57-563
               

               
Cow position:
               
chr24:28724038-28724538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
57-593
               

               
Cow position:
               
chr24:30860231-30860786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 131
               

               
Conread position:
               
57-597
               

               
Cow position:
               
chr24:211584-212145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 100
               

               
Conread position:
               
57-606
               

               
Cow position:
               
chr24:3493499-3494066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 16
               

               
Conread position:
               
58-170
               

               
Cow position:
               
chr24:41982837-41982726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
58-456
               

               
Cow position:
               
chr24:6161241-6160840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
147, 103
               

               
Conread position:
               
58-461
               

               
Cow position:
               
chr24:10308883-10309263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
147, 18
               

               
Conread position:
               
58-606
               

               
Cow position:
               
chr24:2402773-2402193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 102
               

               
Conread position:
               
59-183
               

               
Cow position:
               
chr24:24457955-24457831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 98
               

               
Conread position:
               
59-320
               

               
Cow position:
               
chr24:35503045-35502793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
212, 17
               

               
Conread position:
               
60-223
               

               
Cow position:
               
chr24:26519467-26519638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
60-464
               

               
Cow position:
               
chr24:6090923-6091334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
60-464
               

               
Cow position:
               
chr24:44041400-44040992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
215, 80
               

               
Conread position:
               
63-249
               

               
Cow position:
               
chr24:228119-227941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
65-363
               

               
Cow position:
               
chr24:40257881-40257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
65-464
               

               
Cow position:
               
chr24:16298374-16298770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
194, 81
               

               
Conread position:
               
66-282
               

               
Cow position:
               
chr24:15875018-15874812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
70-257
               

               
Cow position:
               
chr24:32850299-32850487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 144
               

               
Conread position:
               
70-533
               

               
Cow position:
               
chr24:42102986-42103453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 111
               

               
Conread position:
               
73-453
               

               
Cow position:
               
chr24:28221348-28220961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 88
               

               
Conread position:
               
75-269
               

               
Cow position:
               
chr24:18846627-18846815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 87
               

               
Conread position:
               
76-271
               

               
Cow position:
               
chr24:12448017-12448203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
76-384
               

               
Cow position:
               
chr24:27543854-27543542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
76-445
               

               
Cow position:
               
chr24:33153410-33153771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
76-459
               

               
Cow position:
               
chr24:18405682-18405302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
199, 85
               

               
Conread position:
               
77-598
               

               
Cow position:
               
chr24:39483099-39483639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
78-271
               

               
Cow position:
               
chr24:13354425-13354241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
79-464
               

               
Cow position:
               
chr24:23556703-23556325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
190, 64
               

               
Conread position:
               
80-460
               

               
Cow position:
               
chr24:3152949-3152568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
195, 82
               

               
Conread position:
               
80-461
               

               
Cow position:
               
chr24:28553920-28553544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 78
               

               
Conread position:
               
81-350
               

               
Cow position:
               
chr24:29606440-29606170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
81-412
               

               
Cow position:
               
chr24:43733598-43733935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
128, 36
               

               
Conread position:
               
81-413
               

               
Cow position:
               
chr24:8873441-8873107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
81-529
               

               
Cow position:
               
chr24:20874307-20874766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
123, 54
               

               
Conread position:
               
84-271
               

               
Cow position:
               
chr24:10311794-10311979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 80
               

               
Conread position:
               
86-401
               

               
Cow position:
               
chr24:25320624-25320948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
117, 71
               

               
Conread position:
               
87-315
               

               
Cow position:
               
chr24:15288490-15288722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
87-520
               

               
Cow position:
               
chr24:39850244-39849814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
88-397
               

               
Cow position:
               
chr24:42916894-42916588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
183, 74
               

               
Conread position:
               
91-404
               

               
Cow position:
               
chr24:28332642-28332317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
91-440
               

               
Cow position:
               
chr24:634627-634966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
184, 70
               

               
Conread position:
               
91-597
               

               
Cow position:
               
chr24:24491373-24490851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
153, 65
               

               
Conread position:
               
94-609
               

               
Cow position:
               
chr24:15057031-15057574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
97-477
               

               
Cow position:
               
chr24:20225380-20225766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 64
               

               
Conread position:
               
100-537
               

               
Cow position:
               
chr24:27267284-27267712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
106-542
               

               
Cow position:
               
chr24:39123515-39123944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
106-607
               

               
Cow position:
               
chr24:39350575-39350058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 157
               

               
Conread position:
               
111-394
               

               
Cow position:
               
chr24:38347336-38347629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
111-452
               

               
Cow position:
               
chr24:3430379-3430735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
113-608
               

               
Cow position:
               
chr24:40091909-40091420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 29
               

               
Conread position:
               
117-460
               

               
Cow position:
               
chr24:28029055-28028699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
117-509
               

               
Cow position:
               
chr24:28319543-28319145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
119-609
               

               
Cow position:
               
chr24:27054073-27054575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
122-497
               

               
Cow position:
               
chr24:35150189-35150570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
124-450
               

               
Cow position:
               
chr24:34315029-34315355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
146, 37
               

               
Conread position:
               
142-271
               

               
Cow position:
               
chr24:7023074-7023202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
156-461
               

               
Cow position:
               
chr24:18974894-18975219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
119, 100
               

               
Conread position:
               
156-542
               

               
Cow position:
               
chr24:25111893-25112299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
156-606
               

               
Cow position:
               
chr24:34396464-34396006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
166, 74
               

               
Conread position:
               
157-516
               

               
Cow position:
               
chr24:18243772-18243391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 248
               

               
Conread position:
               
159-460
               

               
Cow position:
               
chr24:18331432-18331727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
159-598
               

               
Cow position:
               
chr24:34369310-34368850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
164-424
               

               
Cow position:
               
chr24:44702679-44702945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 87
               

               
Conread position:
               
164-535
               

               
Cow position:
               
chr24:6061690-6061306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
164-558
               

               
Cow position:
               
chr24:16268402-16268008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
123, 91
               

               
Conread position:
               
164-595
               

               
Cow position:
               
chr24:6508062-6507616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 94
               

               
Conread position:
               
164-602
               

               
Cow position:
               
chr24:33724160-33723699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 311
               

               
Conread position:
               
165-458
               

               
Cow position:
               
chr24:40206778-40207057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
166-435
               

               
Cow position:
               
chr24:27941305-27941029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 185
               

               
Conread position:
               
167-485
               

               
Cow position:
               
chr24:23685357-23685026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
169-458
               

               
Cow position:
               
chr24:35795035-35794728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 203
               

               
Conread position:
               
170-600
               

               
Cow position:
               
chr24:1438560-1438113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 156
               

               
Conread position:
               
172-449
               

               
Cow position:
               
chr24:42007455-42007738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 82
               

               
Conread position:
               
172-463
               

               
Cow position:
               
chr24:19535535-19535244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
172-533
               

               
Cow position:
               
chr24:31159337-31159708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
35, 91
               

               
Conread position:
               
172-597
               

               
Cow position:
               
chr24:17311500-17311054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
172-603
               

               
Cow position:
               
chr24:7079500-7079945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
173-448
               

               
Cow position:
               
chr24:14729119-14729400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
160, 78
               

               
Conread position:
               
174-390
               

               
Cow position:
               
chr24:30900516-30900289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
174-498
               

               
Cow position:
               
chr24:43200563-43200221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
175-604
               

               
Cow position:
               
chr24:31776469-31776889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
177-595
               

               
Cow position:
               
chr24:24311215-24311656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
179-459
               

               
Cow position:
               
chr24:39955330-39955042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
179-477
               

               
Cow position:
               
chr24:25885442-25885131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
179-593
               

               
Cow position:
               
chr24:14746353-14746796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
180-498
               

               
Cow position:
               
chr24:39807875-39808181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
214, 29
               

               
Conread position:
               
180-529
               

               
Cow position:
               
chr24:37650387-37650755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
180-533
               

               
Cow position:
               
chr24:35073809-35074176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
180-609
               

               
Cow position:
               
chr24:17955733-17955278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
10, 227
               

               
Conread position:
               
182-460
               

               
Cow position:
               
chr24:16476127-16476415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
182-498
               

               
Cow position:
               
chr24:19769217-19769542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
184-582
               

               
Cow position:
               
chr24:39681576-39681991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
184-598
               

               
Cow position:
               
chr24:35675264-35675707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
189-451
               

               
Cow position:
               
chr24:15861875-15861598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
189-453
               

               
Cow position:
               
chr24:27967806-27968086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
189-461
               

               
Cow position:
               
chr24:28600128-28599850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
189-567
               

               
Cow position:
               
chr24:35529649-35530028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
190-460
               

               
Cow position:
               
chr24:30177963-30178250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
190-606
               

               
Cow position:
               
chr24:1269531-1269961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
190-609
               

               
Cow position:
               
chr24:24755182-24755615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
192-498
               

               
Cow position:
               
chr24:12992784-12993094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
193-597
               

               
Cow position:
               
chr24:16994624-16995053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
193-608
               

               
Cow position:
               
chr24:31378484-31378915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
194-498
               

               
Cow position:
               
chr24:41980931-41980608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
195-453
               

               
Cow position:
               
chr24:28699323-28699582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
195-598
               

               
Cow position:
               
chr24:23824681-23824275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
195-598
               

               
Cow position:
               
chr24:29388978-29389393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
201-533
               

               
Cow position:
               
chr24:6450253-6450583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
202-461
               

               
Cow position:
               
chr24:23442841-23442571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
203-603
               

               
Cow position:
               
chr24:2970866-2970445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
204-590
               

               
Cow position:
               
chr24:28349327-28349732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 56
               

               
Conread position:
               
229-490
               

               
Cow position:
               
chr24:31036123-31036393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
269-598
               

               
Cow position:
               
chr24:18787106-18786772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
273-586
               

               
Cow position:
               
chr24:26455656-26455986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 154
               

               
Conread position:
               
273-598
               

               
Cow position:
               
chr24:31258518-31258183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
274-540
               

               
Cow position:
               
chr24:32086097-32085833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
274-603
               

               
Cow position:
               
chr24:2143563-2143911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 161
               

               
Conread position:
               
277-501
               

               
Cow position:
               
chr24:24457423-24457194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
278-603
               

               
Cow position:
               
chr24:35827563-35827907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
279-477
               

               
Cow position:
               
chr24:14103411-14103616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
280-559
               

               
Cow position:
               
chr24:19611834-19612125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
280-608
               

               
Cow position:
               
chr24:7401392-7401073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
290-605
               

               
Cow position:
               
chr24:2964786-2964477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
291-598
               

               
Cow position:
               
chr24:30897701-30897386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
292-587
               

               
Cow position:
               
chr24:11201809-11201497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 135
               

               
Conread position:
               
293-591
               

               
Cow position:
               
chr24:32194349-32194655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 251
               

               
Conread position:
               
301-498
               

               
Cow position:
               
chr24:19736482-19736281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
156, 23
               

               
Conread position:
               
301-598
               

               
Cow position:
               
chr24:16055649-16055354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
301-603
               

               
Cow position:
               
chr24:40809512-40809205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
315-503
               

               
Cow position:
               
chr24:36713617-36713814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
321-498
               

               
Cow position:
               
chr24:18393655-18393471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
339-593
               

               
Cow position:
               
chr24:15617584-15617323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
343-535
               

               
Cow position:
               
chr24:41963207-41963007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 198
               

               
Conread position:
               
353-593
               

               
Cow position:
               
chr24:25164936-25165187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
355-598
               

               
Cow position:
               
chr24:28045656-28045909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
356-497
               

               
Cow position:
               
chr24:18567611-18567467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
358-603
               

               
Cow position:
               
chr24:19754482-19754740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 165
               

               
Conread position:
               
360-567
               

               
Cow position:
               
chr24:11456929-11456711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 179
               

               
Conread position:
               
368-602
               

               
Cow position:
               
chr24:22888507-22888753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
371-593
               

               
Cow position:
               
chr24:42681657-42681878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
402-601
               

               
Cow position:
               
chr24:33290362-33290160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
416-598
               

               
Cow position:
               
chr24:38291827-38292012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
421-596
               

               
Cow position:
               
chr24:12136111-12136296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 177
               

               
Conread position:
               
421-598
               

               
Cow position:
               
chr24:6427675-6427860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
421-607
               

               
Cow position:
               
chr24:23176727-23176534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
40, 158
               

               
Conread position:
               
427-586
               

               
Cow position:
               
chr24:16481326-16481169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
428-602
               

               
Cow position:
               
chr24:36497754-36497575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
446-601
               

               
Cow position:
               
chr24:41332584-41332423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
456-601
               

               
Cow position:
               
chr24:2531592-2531741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
462-606
               

               
Cow position:
               
chr24:15909635-15909786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               
Show alignments to all cow chromosomes.