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Cow genome map

           
Conread name:
           
Ss1.1-Emb1-C0005213_E07.5
        

               
Conread position:
               
1-271
               

               
Cow position:
               
chr4:54170926-54171188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr4:67706371-67706635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
57, 164
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:11918114-11917838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 160
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr4:34172013-34171613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
57, 165
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr4:54494395-54494782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr4:53832607-53833050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
55, 168
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr4:52017290-52016836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr4:8413553-8413099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr4:14471012-14470514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
2-153
               

               
Cow position:
               
chr4:11218377-11218534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 107
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr4:8558805-8558643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr4:32250007-32250172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr4:46529473-46529308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr4:52086664-52086825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr4:53822448-53822612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr4:66548230-66548062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr4:16092059-16091895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr4:67408049-67408220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
2-164
               

               
Cow position:
               
chr4:51002710-51002880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr4:21233524-21233352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 140
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr4:54931114-54930941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr4:11922163-11921985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr4:12605368-12605192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 130
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr4:22317254-22317422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:652542-652721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:1864707-1864886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:6414267-6414446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:6446271-6446450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:40410796-40410619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
56, 165
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:49814457-49814278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:55522859-55523038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr4:26540793-26540984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr4:61625074-61624884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 173
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr4:3252044-3251855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr4:1355952-1355766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr4:19493076-19493271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 168
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr4:9375578-9375369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr4:31484199-31483990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr4:62120523-62120732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr4:8414803-8414588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr4:24133913-24133673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr4:15462750-15462506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
53, 202
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr4:51740181-51739936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr4:60771754-60772006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr4:54812057-54812304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr4:56191650-56191403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr4:56852457-56852701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr4:8760805-8761051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr4:31774804-31774556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr4:33020129-33019881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr4:33146372-33146621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 157
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr4:38706399-38706152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr4:61450326-61450573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr4:68470692-68470445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr4:68783807-68784068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr4:20025151-20025417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr4:56177367-56177640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 173
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr4:64061515-64061248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:607120-607388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:2253705-2253973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:3446682-3446414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:4169333-4169601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:6547175-6546907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:7080404-7080672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:7260296-7260028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:10424992-10425260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:14967594-14967862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:16859207-16858940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:18331601-18331869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:19025857-19025588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:19502246-19501975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:21602929-21602661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 162
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:26131673-26131941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:29189078-29188810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:29834137-29834405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:30541676-30541944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:31955988-31955723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:32658319-32658051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:42596755-42597024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:46021105-46021373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:47264292-47264560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:48959337-48959070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:50019034-50018766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:54161552-54161284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:55271199-55270936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:57493772-57493504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:58292245-58292512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:58748160-58748428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:60579615-60579347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:60652210-60652465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
203, 5
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:60677219-60676951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:62014442-62014175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:63195068-63194800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr4:1404597-1404868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 140
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr4:3800774-3800502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr4:14754931-14754660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr4:49409023-49409292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:351785-352063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:1499583-1499311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:5441146-5440868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:12237734-12237456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:18335432-18335154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:21943192-21942915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:33372255-33371977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:34223449-34223723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:37553487-37553209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:37707640-37707362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:44051790-44052064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:44494027-44493749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:47047298-47047579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
56, 145
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr4:48411395-48411117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr4:5874511-5874792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
42, 160
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr4:11924835-11924553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 168
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr4:16832025-16831742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr4:46708970-46708654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 168
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr4:11925540-11925224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr4:56226445-56226765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
2-320
               

               
Cow position:
               
chr4:62673830-62674155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr4:20644140-20644466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
44, 167
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr4:26163414-26163063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr4:19255881-19256229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 178
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr4:11091123-11090764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
53, 161
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr4:14742825-14743190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
201, 71
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr4:11641061-11640680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr4:8377623-8377243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr4:20562186-20562549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
342, 38
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr4:68944619-68944213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr4:67392520-67392919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr4:21589049-21588635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr4:42480743-42481153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 158
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr4:41097470-41097876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr4:46526557-46526970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr4:61399863-61399459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
2-416
               

               
Cow position:
               
chr4:61999894-61999465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr4:53829989-53830423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 168
               

               
Conread position:
               
2-425
               

               
Cow position:
               
chr4:43147959-43148402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 169
               

               
Conread position:
               
2-426
               

               
Cow position:
               
chr4:38834599-38834160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-431
               

               
Cow position:
               
chr4:30574013-30574447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-433
               

               
Cow position:
               
chr4:53999963-53999511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 167
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr4:18186885-18186438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-437
               

               
Cow position:
               
chr4:560960-561404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr4:56233249-56233691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr4:19584261-19584726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 170
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr4:10122921-10123380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-446
               

               
Cow position:
               
chr4:14047939-14048398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-449
               

               
Cow position:
               
chr4:22850164-22849701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 192
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr4:59838815-59839280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:6231873-6232339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:6395603-6396069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:7138851-7138385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:7584628-7585094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:10420756-10421222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:16765991-16765525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:18282319-18282785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:18599886-18599420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:18684562-18684096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:21044649-21044183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:24094411-24093945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:25045541-25045075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:26538179-26538645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:28456518-28456052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:29560014-29559548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:31535330-31535796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:33171654-33172121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:36350368-36350834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:41429717-41429251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:42381797-42381331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:42865522-42865984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:44663168-44662700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:44700374-44699908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:45105443-45104978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:45376974-45377440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:58577152-58576686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:62221850-62221382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:62453473-62453007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:64156243-64156709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr4:65198286-65197820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr4:1436159-1435712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
42, 151
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr4:15618209-15618673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr4:18672739-18673206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr4:29515496-29515961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr4:37584353-37583886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr4:46585392-46584921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr4:48894088-48894555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr4:61972918-61972443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr4:28855625-28856094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:5882990-5883461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:9005834-9006305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:9357922-9358383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:17032986-17032517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:17822045-17822515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:19575042-19575499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:22086423-22085952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:28864887-28864416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:30435773-30436245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:38864566-38865036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:42616699-42617170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:46743733-46743264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:47020817-47021287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:47116818-47117287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:48736393-48736864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:49176001-49176472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 167
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr4:60788767-60789239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr4:7429877-7430344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr4:9795809-9795354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
57, 162
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr4:1014627-1015097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr4:11201377-11201847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
53, 163
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr4:15635886-15635421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr4:18973999-18974450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 161
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr4:22073746-22073297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr4:26323299-26323767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr4:51903159-51903632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr4:67444702-67445172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr4:24002412-24001935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
53, 161
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr4:31136311-31136784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:120175-119719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:162595-163071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:4772226-4772703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:6150881-6150404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:6210250-6210725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 158
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:8678317-8678794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:9041462-9041939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:13589652-13590113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:14386760-14386284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:17091445-17090972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 169
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:17235534-17236001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:17752324-17752801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:26347529-26347053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:27337725-27338200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:29312493-29312969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:34644222-34643744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:38584392-38584871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:46253961-46253484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:57240006-57240478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr4:59383950-59383471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-465
               

               
Cow position:
               
chr4:48152813-48152340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
47, 167
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr4:22236918-22236448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
56, 112
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr4:44839326-44838860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 134
               

               
Conread position:
               
2-470
               

               
Cow position:
               
chr4:51850756-51851243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr4:41441122-41441611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr4:37703823-37704314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
51, 166
               

               
Conread position:
               
2-488
               

               
Cow position:
               
chr4:37828266-37827794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
2-497
               

               
Cow position:
               
chr4:22101707-22101196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 72
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr4:6653304-6653792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr4:20139970-20139447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 256
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr4:23853756-23854250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr4:38998990-38999493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
2-511
               

               
Cow position:
               
chr4:4185678-4186202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
2-529
               

               
Cow position:
               
chr4:19096854-19097391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
2-533
               

               
Cow position:
               
chr4:19541680-19542242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 143
               

               
Conread position:
               
2-535
               

               
Cow position:
               
chr4:27276986-27276433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 161
               

               
Conread position:
               
2-558
               

               
Cow position:
               
chr4:2680939-2681464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
202, 71
               

               
Conread position:
               
2-558
               

               
Cow position:
               
chr4:34383791-34383207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 260
               

               
Conread position:
               
2-585
               

               
Cow position:
               
chr4:22115144-22115766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 103
               

               
Conread position:
               
2-586
               

               
Cow position:
               
chr4:41186808-41186221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 159
               

               
Conread position:
               
2-597
               

               
Cow position:
               
chr4:61897975-61897361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
2-598
               

               
Cow position:
               
chr4:20328156-20327531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 164
               

               
Conread position:
               
2-602
               

               
Cow position:
               
chr4:12560578-12561216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
2-603
               

               
Cow position:
               
chr4:3439947-3440590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
2-603
               

               
Cow position:
               
chr4:21073619-21072976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
3-159
               

               
Cow position:
               
chr4:12752337-12752500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr4:33497075-33497245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr4:33366668-33366496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr4:48733192-48733369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr4:37169255-37169077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr4:49745187-49745364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr4:27287588-27287399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr4:34044208-34044033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr4:59643137-59643343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 107
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:11930483-11930728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 165
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:16642330-16642576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:17877475-17877720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 161
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:26874391-26874146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:29529302-29529056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:34713331-34713574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:36899891-36900135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:44734133-44734379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr4:46711092-46710844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
58, 169
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr4:14353124-14352876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 167
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr4:30220123-30219875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 167
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr4:60124220-60123973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr4:33149401-33149660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr4:41639834-41640098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr4:4487481-4487748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr4:10553759-10554026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr4:23303753-23303486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr4:33069326-33069060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr4:52601615-52601881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr4:61242784-61243042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr4:12018119-12018384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 134
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:359398-359676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:2190782-2190509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 156
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:2263196-2262919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:3354430-3354153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:9519856-9520130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 163
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:10136102-10136371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
58, 164
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:11191522-11191796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
52, 156
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:12557923-12557657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:16364837-16365114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:17616254-17616531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:54757756-54757480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr4:64875612-64875889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr4:13979557-13979838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr4:14814084-14814361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr4:10885151-10885429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr4:17375898-17375590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 165
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr4:36025755-36025444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr4:27466253-27466581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
44, 166
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr4:21553623-21553200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr4:16736061-16736495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
3-437
               

               
Cow position:
               
chr4:3475170-3475633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
47, 265
               

               
Conread position:
               
3-453
               

               
Cow position:
               
chr4:18602699-18602237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 165
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr4:6034532-6034058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr4:21844647-21845115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
3-465
               

               
Cow position:
               
chr4:12589109-12589586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
3-468
               

               
Cow position:
               
chr4:10403844-10404324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
3-471
               

               
Cow position:
               
chr4:30779277-30778795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
3-479
               

               
Cow position:
               
chr4:14230068-14229579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
43, 168
               

               
Conread position:
               
3-529
               

               
Cow position:
               
chr4:23382249-23381713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 151
               

               
Conread position:
               
3-608
               

               
Cow position:
               
chr4:49794234-49794852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 117
               

               
Conread position:
               
4-165
               

               
Cow position:
               
chr4:25192248-25192407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr4:39422112-39422378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr4:27546319-27546586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr4:36971375-36970946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
4-461
               

               
Cow position:
               
chr4:22138675-22138195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr4:61816887-61816408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 154
               

               
Conread position:
               
4-602
               

               
Cow position:
               
chr4:15623395-15624033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 158
               

               
Conread position:
               
5-153
               

               
Cow position:
               
chr4:57721399-57721555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
5-156
               

               
Cow position:
               
chr4:213442-213590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr4:47894994-47894818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr4:10993983-10993724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr4:6457219-6456944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 164
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr4:61673465-61673192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 164
               

               
Conread position:
               
5-453
               

               
Cow position:
               
chr4:27918937-27918474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr4:24119351-24118881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
48, 164
               

               
Conread position:
               
5-519
               

               
Cow position:
               
chr4:69515558-69515049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
6-147
               

               
Cow position:
               
chr4:54974497-54974644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
6-152
               

               
Cow position:
               
chr4:43898378-43898225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
6-160
               

               
Cow position:
               
chr4:20298794-20298958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
6-163
               

               
Cow position:
               
chr4:23508841-23509003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr4:46596738-46596901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 6
               

               
Conread position:
               
6-250
               

               
Cow position:
               
chr4:48409987-48409751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 108
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chr4:33090192-33089917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 169
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chr4:47280554-47280300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
198, 44
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr4:44450025-44449752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
49, 183
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr4:56409743-56410016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
6-284
               

               
Cow position:
               
chr4:28613382-28613658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr4:5610508-5610125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
6-397
               

               
Cow position:
               
chr4:27292399-27291994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
6-434
               

               
Cow position:
               
chr4:68233555-68233967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr4:19438006-19438480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr4:36892917-36893384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 155
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr4:23526252-23526720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 163
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr4:51898564-51899032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr4:9136839-9137306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr4:26400518-26400983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr4:42672732-42673203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
6-477
               

               
Cow position:
               
chr4:9445128-9444642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 163
               

               
Conread position:
               
6-489
               

               
Cow position:
               
chr4:39231967-39231460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 168
               

               
Conread position:
               
6-498
               

               
Cow position:
               
chr4:47730432-47730928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 151
               

               
Conread position:
               
6-524
               

               
Cow position:
               
chr4:45644750-45644222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
6-533
               

               
Cow position:
               
chr4:25878959-25879500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
6-558
               

               
Cow position:
               
chr4:34209596-34210168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
6-558
               

               
Cow position:
               
chr4:46456511-46455934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
6-598
               

               
Cow position:
               
chr4:13142962-13142391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
51, 121
               

               
Conread position:
               
6-598
               

               
Cow position:
               
chr4:19434821-19435441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
6-609
               

               
Cow position:
               
chr4:27997244-27997880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 163
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr4:43884605-43884846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 161
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr4:10044249-10043986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
7-271
               

               
Cow position:
               
chr4:43316136-43315873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr4:48030377-48030650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 161
               

               
Conread position:
               
7-284
               

               
Cow position:
               
chr4:43027708-43027440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
197, 41
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr4:25595968-25595692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 167
               

               
Conread position:
               
7-461
               

               
Cow position:
               
chr4:18255426-18255879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
51, 162
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr4:3388124-3388574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
264, 43
               

               
Conread position:
               
8-170
               

               
Cow position:
               
chr4:52177985-52177816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 161
               

               
Conread position:
               
8-177
               

               
Cow position:
               
chr4:43840461-43840285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 161
               

               
Conread position:
               
8-178
               

               
Cow position:
               
chr4:44073250-44073070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
8-183
               

               
Cow position:
               
chr4:4127194-4127376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
8-250
               

               
Cow position:
               
chr4:26009009-26009251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 161
               

               
Conread position:
               
8-282
               

               
Cow position:
               
chr4:2562770-2563041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
8-282
               

               
Cow position:
               
chr4:18738223-18737951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 161
               

               
Conread position:
               
8-458
               

               
Cow position:
               
chr4:17819236-17818773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 41
               

               
Conread position:
               
8-458
               

               
Cow position:
               
chr4:18975935-18975470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr4:33097391-33096951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr4:33433692-33433230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr4:54190671-54191115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr4:64039682-64040141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
8-461
               

               
Cow position:
               
chr4:15904671-15905127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
68, 64
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr4:65919186-65919642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
8-467
               

               
Cow position:
               
chr4:14152636-14153127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 155
               

               
Conread position:
               
8-498
               

               
Cow position:
               
chr4:65179570-65179079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
47, 74
               

               
Conread position:
               
8-598
               

               
Cow position:
               
chr4:21064614-21065217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 34
               

               
Conread position:
               
8-602
               

               
Cow position:
               
chr4:11022114-11021484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
9-172
               

               
Cow position:
               
chr4:55395048-55395217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr4:27178344-27178584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 160
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr4:42328833-42328594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 158
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr4:55508855-55508523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr4:26549018-26549356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
9-497
               

               
Cow position:
               
chr4:12003788-12004283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 159
               

               
Conread position:
               
9-533
               

               
Cow position:
               
chr4:51783739-51784290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
9-598
               

               
Cow position:
               
chr4:52748891-52748270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
10-335
               

               
Cow position:
               
chr4:2671698-2671375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
45, 153
               

               
Conread position:
               
10-468
               

               
Cow position:
               
chr4:22841915-22842372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 159
               

               
Conread position:
               
11-172
               

               
Cow position:
               
chr4:54334773-54334616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
11-174
               

               
Cow position:
               
chr4:50200944-50201114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 158
               

               
Conread position:
               
11-369
               

               
Cow position:
               
chr4:28676646-28676289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
11-453
               

               
Cow position:
               
chr4:54339413-54338956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
11-601
               

               
Cow position:
               
chr4:23655561-23656167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 157
               

               
Conread position:
               
12-602
               

               
Cow position:
               
chr4:8692594-8692026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr4:2591005-2590749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
16, 155
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr4:33628760-33628504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
14-276
               

               
Cow position:
               
chr4:69017937-69018197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
14-427
               

               
Cow position:
               
chr4:27540190-27540609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr4:4672764-4672309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 153
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr4:62772368-62771893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
14-541
               

               
Cow position:
               
chr4:30973915-30974446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
15-157
               

               
Cow position:
               
chr4:57146852-57147002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
15-271
               

               
Cow position:
               
chr4:17500379-17500124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
15-458
               

               
Cow position:
               
chr4:5623629-5623177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
16-271
               

               
Cow position:
               
chr4:10397558-10397812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
16-533
               

               
Cow position:
               
chr4:10731790-10732334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
22-602
               

               
Cow position:
               
chr4:23647257-23646674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 78
               

               
Conread position:
               
27-453
               

               
Cow position:
               
chr4:15793647-15794080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
35-598
               

               
Cow position:
               
chr4:65116616-65116023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
37-159
               

               
Cow position:
               
chr4:9912277-9912398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
42-394
               

               
Cow position:
               
chr4:14513633-14513273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
43-174
               

               
Cow position:
               
chr4:59106284-59106153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
47-453
               

               
Cow position:
               
chr4:46737871-46737458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
156, 114
               

               
Conread position:
               
48-177
               

               
Cow position:
               
chr4:51866510-51866638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
49-388
               

               
Cow position:
               
chr4:46059129-46058796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
49-605
               

               
Cow position:
               
chr4:59056226-59055672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
333, 16
               

               
Conread position:
               
50-404
               

               
Cow position:
               
chr4:19237856-19238204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
159, 50
               

               
Conread position:
               
51-183
               

               
Cow position:
               
chr4:649538-649667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
51-282
               

               
Cow position:
               
chr4:22073054-22072838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
153, 81
               

               
Conread position:
               
51-295
               

               
Cow position:
               
chr4:64661698-64661458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
51-347
               

               
Cow position:
               
chr4:53701153-53701441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
224, 110
               

               
Conread position:
               
51-448
               

               
Cow position:
               
chr4:11901946-11901547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 106
               

               
Conread position:
               
51-459
               

               
Cow position:
               
chr4:43866233-43865832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
51-603
               

               
Cow position:
               
chr4:19558341-19558864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
239, 88
               

               
Conread position:
               
52-461
               

               
Cow position:
               
chr4:8133919-8133513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
157, 109
               

               
Conread position:
               
53-445
               

               
Cow position:
               
chr4:66173178-66172785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
215, 107
               

               
Conread position:
               
53-593
               

               
Cow position:
               
chr4:36813005-36813545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
53-608
               

               
Cow position:
               
chr4:16239521-16238963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
55-250
               

               
Cow position:
               
chr4:7810275-7810462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
154, 100
               

               
Conread position:
               
55-379
               

               
Cow position:
               
chr4:35930048-35930371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
148, 59
               

               
Conread position:
               
55-402
               

               
Cow position:
               
chr4:59130045-59129669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
55-461
               

               
Cow position:
               
chr4:7965030-7964621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
201, 98
               

               
Conread position:
               
55-592
               

               
Cow position:
               
chr4:41976047-41975513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
178, 94
               

               
Conread position:
               
55-593
               

               
Cow position:
               
chr4:28151149-28151697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 82
               

               
Conread position:
               
56-153
               

               
Cow position:
               
chr4:42638735-42638638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-159
               

               
Cow position:
               
chr4:41866829-41866933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
56-163
               

               
Cow position:
               
chr4:25579700-25579807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-170
               

               
Cow position:
               
chr4:19423064-19423178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-174
               

               
Cow position:
               
chr4:4283305-4283188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-174
               

               
Cow position:
               
chr4:9845222-9845341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-174
               

               
Cow position:
               
chr4:65538956-65538839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
56-178
               

               
Cow position:
               
chr4:48283454-48283575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-179
               

               
Cow position:
               
chr4:28711733-28711854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
56-182
               

               
Cow position:
               
chr4:46370340-46370212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr4:9482627-9482503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr4:11389960-11389829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr4:22250127-22249998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr4:24686317-24686185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr4:36755342-36755468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
56-190
               

               
Cow position:
               
chr4:49089112-49089249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
56-241
               

               
Cow position:
               
chr4:68796278-68796456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
56-245
               

               
Cow position:
               
chr4:45499926-45499746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-247
               

               
Cow position:
               
chr4:48142399-48142582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-248
               

               
Cow position:
               
chr4:17774972-17774789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
56-248
               

               
Cow position:
               
chr4:18108408-18108599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
149, 105
               

               
Conread position:
               
56-248
               

               
Cow position:
               
chr4:61170110-61169926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr4:8439824-8439638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr4:23150082-23149899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr4:24807457-24807271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr4:41999563-41999381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr4:42278615-42278426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr4:46068923-46069109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 77
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr4:50194111-50194297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-268
               

               
Cow position:
               
chr4:26430791-26431003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 124
               

               
Conread position:
               
56-269
               

               
Cow position:
               
chr4:22023523-22023313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
56-269
               

               
Cow position:
               
chr4:31773090-31773293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
56-269
               

               
Cow position:
               
chr4:39273827-39274031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
56-269
               

               
Cow position:
               
chr4:46151852-46151635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr4:8203014-8202808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr4:50802209-50802415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr4:50860440-50860234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr4:51859869-51860075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-271
               

               
Cow position:
               
chr4:68844827-68845033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr4:10432360-10432576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr4:24671558-24671343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr4:41598935-41599151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
149, 105
               

               
Conread position:
               
56-285
               

               
Cow position:
               
chr4:37879059-37879283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
217, 13
               

               
Conread position:
               
56-289
               

               
Cow position:
               
chr4:38467234-38467457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
226, 105
               

               
Conread position:
               
56-308
               

               
Cow position:
               
chr4:10041648-10041908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
213, 204
               

               
Conread position:
               
56-313
               

               
Cow position:
               
chr4:9695-9442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 105
               

               
Conread position:
               
56-313
               

               
Cow position:
               
chr4:28094856-28094579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
56-315
               

               
Cow position:
               
chr4:5979168-5978892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
56-315
               

               
Cow position:
               
chr4:29710423-29710156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 122
               

               
Conread position:
               
56-325
               

               
Cow position:
               
chr4:17585399-17585130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 84
               

               
Conread position:
               
56-325
               

               
Cow position:
               
chr4:58687843-58687546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 219
               

               
Conread position:
               
56-326
               

               
Cow position:
               
chr4:5575742-5576018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
197, 99
               

               
Conread position:
               
56-327
               

               
Cow position:
               
chr4:27348813-27349077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
212, 79
               

               
Conread position:
               
56-341
               

               
Cow position:
               
chr4:6166700-6166427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
212, 30
               

               
Conread position:
               
56-345
               

               
Cow position:
               
chr4:2244369-2244080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
138, 105
               

               
Conread position:
               
56-345
               

               
Cow position:
               
chr4:28789531-28789215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
95, 224
               

               
Conread position:
               
56-350
               

               
Cow position:
               
chr4:39646319-39646607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
56-351
               

               
Cow position:
               
chr4:36660109-36659823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
148, 106
               

               
Conread position:
               
56-366
               

               
Cow position:
               
chr4:24432266-24432575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 63
               

               
Conread position:
               
56-369
               

               
Cow position:
               
chr4:46274812-46275128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
56-377
               

               
Cow position:
               
chr4:59888980-59888650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
56-380
               

               
Cow position:
               
chr4:15872102-15871772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
201, 81
               

               
Conread position:
               
56-390
               

               
Cow position:
               
chr4:43543115-43542779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
152, 104
               

               
Conread position:
               
56-394
               

               
Cow position:
               
chr4:57931520-57931874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
56-401
               

               
Cow position:
               
chr4:11872293-11871943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
56-404
               

               
Cow position:
               
chr4:50760497-50760154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
189, 108
               

               
Conread position:
               
56-405
               

               
Cow position:
               
chr4:36840899-36841254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
138, 97
               

               
Conread position:
               
56-406
               

               
Cow position:
               
chr4:39009588-39009939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
213, 104
               

               
Conread position:
               
56-406
               

               
Cow position:
               
chr4:43370230-43369879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
56-410
               

               
Cow position:
               
chr4:49992706-49993049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
56-424
               

               
Cow position:
               
chr4:25906706-25906339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 9
               

               
Conread position:
               
56-425
               

               
Cow position:
               
chr4:54501830-54501461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
148, 106
               

               
Conread position:
               
56-426
               

               
Cow position:
               
chr4:29035537-29035904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
147, 116
               

               
Conread position:
               
56-433
               

               
Cow position:
               
chr4:26175624-26175248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
56-443
               

               
Cow position:
               
chr4:61190899-61190504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 22
               

               
Conread position:
               
56-445
               

               
Cow position:
               
chr4:604483-604087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-450
               

               
Cow position:
               
chr4:2422200-2422592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
56-451
               

               
Cow position:
               
chr4:5984427-5984027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
56-452
               

               
Cow position:
               
chr4:38799574-38799181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 105
               

               
Conread position:
               
56-452
               

               
Cow position:
               
chr4:47774012-47773621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 63
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:13764318-13763914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:15802958-15803362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:25865136-25865540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:30474957-30475361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
147, 94
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:32405138-32405542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:33554203-33553799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:38564832-38565235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:47114565-47114966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
147, 73
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:54540620-54541024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:60856300-60856710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr4:63102219-63102623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-454
               

               
Cow position:
               
chr4:28147653-28147250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-454
               

               
Cow position:
               
chr4:59781312-59781710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
56-455
               

               
Cow position:
               
chr4:1034666-1035071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 183
               

               
Conread position:
               
56-455
               

               
Cow position:
               
chr4:32260228-32259824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr4:13834919-13835328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr4:21008658-21008251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 105
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr4:54962421-54962830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr4:62654065-62653656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-459
               

               
Cow position:
               
chr4:17833286-17832876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
201, 105
               

               
Conread position:
               
56-459
               

               
Cow position:
               
chr4:46477319-46476925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
148, 99
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr4:3421265-3421648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
181, 105
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr4:7501505-7501895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
230, 108
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr4:28399778-28399391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr4:37620268-37619862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 107
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr4:19534103-19534518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr4:25197878-25197465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 105
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr4:48784595-48785006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 116
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr4:52186637-52187052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-465
               

               
Cow position:
               
chr4:24458480-24458071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
203, 106
               

               
Conread position:
               
56-466
               

               
Cow position:
               
chr4:24198174-24197770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
222, 105
               

               
Conread position:
               
56-466
               

               
Cow position:
               
chr4:58248031-58248437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
56-466
               

               
Cow position:
               
chr4:68362559-68362957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
138, 87
               

               
Conread position:
               
56-467
               

               
Cow position:
               
chr4:21058771-21058343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
219, 85
               

               
Conread position:
               
56-467
               

               
Cow position:
               
chr4:59871124-59871512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
219, 97
               

               
Conread position:
               
56-468
               

               
Cow position:
               
chr4:7258807-7258399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
56-468
               

               
Cow position:
               
chr4:36577975-36577596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
230, 108
               

               
Conread position:
               
56-469
               

               
Cow position:
               
chr4:9649646-9650040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
349, 104
               

               
Conread position:
               
56-470
               

               
Cow position:
               
chr4:38181312-38181720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 105
               

               
Conread position:
               
56-472
               

               
Cow position:
               
chr4:12903436-12903860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
148, 99
               

               
Conread position:
               
56-477
               

               
Cow position:
               
chr4:62471687-62472126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
148, 105
               

               
Conread position:
               
56-490
               

               
Cow position:
               
chr4:46258101-46258553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
149, 7
               

               
Conread position:
               
56-494
               

               
Cow position:
               
chr4:38952178-38952619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
208, 105
               

               
Conread position:
               
56-497
               

               
Cow position:
               
chr4:16602436-16601994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr4:3850177-3850621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
203, 6
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr4:27755686-27755234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
155, 106
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr4:62618126-62618586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
56-498
               

               
Cow position:
               
chr4:65650502-65650064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
152, 104
               

               
Conread position:
               
56-502
               

               
Cow position:
               
chr4:16339970-16339533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 116
               

               
Conread position:
               
56-533
               

               
Cow position:
               
chr4:25889229-25888725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
56-533
               

               
Cow position:
               
chr4:41301381-41300888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 276
               

               
Conread position:
               
56-534
               

               
Cow position:
               
chr4:61304801-61304303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
152, 83
               

               
Conread position:
               
56-541
               

               
Cow position:
               
chr4:29805761-29805256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 158
               

               
Conread position:
               
56-558
               

               
Cow position:
               
chr4:21532010-21531509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
56-585
               

               
Cow position:
               
chr4:17124672-17124130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
210, 104
               

               
Conread position:
               
56-587
               

               
Cow position:
               
chr4:52225605-52226166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
56-591
               

               
Cow position:
               
chr4:19306875-19307421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 103
               

               
Conread position:
               
56-591
               

               
Cow position:
               
chr4:53207927-53208468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
151, 76
               

               
Conread position:
               
56-593
               

               
Cow position:
               
chr4:12697263-12697798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 93
               

               
Conread position:
               
56-593
               

               
Cow position:
               
chr4:25369738-25370281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 101
               

               
Conread position:
               
56-593
               

               
Cow position:
               
chr4:28378024-28377506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 9
               

               
Conread position:
               
56-593
               

               
Cow position:
               
chr4:45235247-45234703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 97
               

               
Conread position:
               
56-593
               

               
Cow position:
               
chr4:53125756-53126284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
219, 94
               

               
Conread position:
               
56-593
               

               
Cow position:
               
chr4:58707562-58707006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 64
               

               
Conread position:
               
56-597
               

               
Cow position:
               
chr4:1374013-1374526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 107
               

               
Conread position:
               
56-598
               

               
Cow position:
               
chr4:21370995-21371554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 177
               

               
Conread position:
               
56-598
               

               
Cow position:
               
chr4:23494547-23495082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 106
               

               
Conread position:
               
56-598
               

               
Cow position:
               
chr4:25972518-25973072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 102
               

               
Conread position:
               
56-598
               

               
Cow position:
               
chr4:31348593-31348008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 283
               

               
Conread position:
               
56-598
               

               
Cow position:
               
chr4:53208858-53209394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
212, 104
               

               
Conread position:
               
56-603
               

               
Cow position:
               
chr4:2609862-2610399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 32
               

               
Conread position:
               
56-603
               

               
Cow position:
               
chr4:54146869-54146296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
56-603
               

               
Cow position:
               
chr4:58834780-58834220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 77
               

               
Conread position:
               
56-606
               

               
Cow position:
               
chr4:2121773-2121214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
56-608
               

               
Cow position:
               
chr4:4084829-4084254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
56-608
               

               
Cow position:
               
chr4:10837742-10837197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
56-610
               

               
Cow position:
               
chr4:10992577-10992015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 43
               

               
Conread position:
               
56-610
               

               
Cow position:
               
chr4:12591591-12591016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 65
               

               
Conread position:
               
57-182
               

               
Cow position:
               
chr4:45073881-45073756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-250
               

               
Cow position:
               
chr4:66918516-66918706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
148, 103
               

               
Conread position:
               
57-327
               

               
Cow position:
               
chr4:13920499-13920207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 212
               

               
Conread position:
               
57-344
               

               
Cow position:
               
chr4:38309515-38309227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
152, 104
               

               
Conread position:
               
57-391
               

               
Cow position:
               
chr4:14159504-14159168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 104
               

               
Conread position:
               
57-404
               

               
Cow position:
               
chr4:21056808-21057160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
97, 162
               

               
Conread position:
               
57-405
               

               
Cow position:
               
chr4:5777412-5777073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 104
               

               
Conread position:
               
57-450
               

               
Cow position:
               
chr4:65826245-65825828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
104, 60
               

               
Conread position:
               
57-455
               

               
Cow position:
               
chr4:69343337-69343724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
200, 43
               

               
Conread position:
               
57-458
               

               
Cow position:
               
chr4:16000722-16000312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
57-458
               

               
Cow position:
               
chr4:35144868-35145275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
57-458
               

               
Cow position:
               
chr4:40218394-40218797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
57-460
               

               
Cow position:
               
chr4:3687545-3687948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 103
               

               
Conread position:
               
57-460
               

               
Cow position:
               
chr4:10055831-10056236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
147, 89
               

               
Conread position:
               
57-465
               

               
Cow position:
               
chr4:15500884-15500467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 106
               

               
Conread position:
               
57-515
               

               
Cow position:
               
chr4:59333350-59332891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
57-541
               

               
Cow position:
               
chr4:65816072-65815590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
152, 104
               

               
Conread position:
               
57-580
               

               
Cow position:
               
chr4:242846-243387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 105
               

               
Conread position:
               
58-274
               

               
Cow position:
               
chr4:59118530-59118319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
58-492
               

               
Cow position:
               
chr4:21392175-21391748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
190, 18
               

               
Conread position:
               
58-498
               

               
Cow position:
               
chr4:20090946-20090532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
58-528
               

               
Cow position:
               
chr4:44956582-44956080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 364
               

               
Conread position:
               
58-555
               

               
Cow position:
               
chr4:48499453-48499947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 158
               

               
Conread position:
               
58-597
               

               
Cow position:
               
chr4:23311639-23311097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 104
               

               
Conread position:
               
59-174
               

               
Cow position:
               
chr4:39609218-39609333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
59-271
               

               
Cow position:
               
chr4:54571985-54571781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
150, 102
               

               
Conread position:
               
60-367
               

               
Cow position:
               
chr4:7249946-7249635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
60-603
               

               
Cow position:
               
chr4:17379193-17378667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
61-271
               

               
Cow position:
               
chr4:49559686-49559485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
142, 100
               

               
Conread position:
               
62-271
               

               
Cow position:
               
chr4:7873-7673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
62-396
               

               
Cow position:
               
chr4:29813908-29813581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
147, 99
               

               
Conread position:
               
62-531
               

               
Cow position:
               
chr4:66256312-66256794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
212, 45
               

               
Conread position:
               
63-391
               

               
Cow position:
               
chr4:12700729-12700385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
63-453
               

               
Cow position:
               
chr4:43086446-43086050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
140, 98
               

               
Conread position:
               
63-502
               

               
Cow position:
               
chr4:24744789-24744332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
142, 97
               

               
Conread position:
               
64-459
               

               
Cow position:
               
chr4:11671081-11671477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 75
               

               
Conread position:
               
66-458
               

               
Cow position:
               
chr4:29569187-29568788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
135, 84
               

               
Conread position:
               
68-249
               

               
Cow position:
               
chr4:11922815-11922635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
68-591
               

               
Cow position:
               
chr4:65406724-65406210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 27
               

               
Conread position:
               
68-603
               

               
Cow position:
               
chr4:24188006-24187423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 201
               

               
Conread position:
               
69-282
               

               
Cow position:
               
chr4:63266430-63266633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
140, 92
               

               
Conread position:
               
70-269
               

               
Cow position:
               
chr4:61721252-61721051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
70-436
               

               
Cow position:
               
chr4:1915942-1915576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
208, 85
               

               
Conread position:
               
71-463
               

               
Cow position:
               
chr4:13832986-13832579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 233
               

               
Conread position:
               
72-377
               

               
Cow position:
               
chr4:42232304-42232602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
73-377
               

               
Cow position:
               
chr4:62570430-62570762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
73-409
               

               
Cow position:
               
chr4:65168369-65168027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
196, 85
               

               
Conread position:
               
73-443
               

               
Cow position:
               
chr4:48137551-48137921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
196, 15
               

               
Conread position:
               
73-448
               

               
Cow position:
               
chr4:480371-479994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 85
               

               
Conread position:
               
73-498
               

               
Cow position:
               
chr4:40414995-40414558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
131, 89
               

               
Conread position:
               
76-271
               

               
Cow position:
               
chr4:43752811-43753002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
102, 79
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr4:58283456-58283288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 83
               

               
Conread position:
               
78-294
               

               
Cow position:
               
chr4:20117206-20116999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
191, 39
               

               
Conread position:
               
78-417
               

               
Cow position:
               
chr4:18489751-18489404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 25
               

               
Conread position:
               
78-453
               

               
Cow position:
               
chr4:47056666-47057054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
78-456
               

               
Cow position:
               
chr4:12426903-12426518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
78-463
               

               
Cow position:
               
chr4:8947039-8947425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
78-463
               

               
Cow position:
               
chr4:17112237-17111844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
132, 83
               

               
Conread position:
               
78-466
               

               
Cow position:
               
chr4:26469286-26469659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
181, 24
               

               
Conread position:
               
78-591
               

               
Cow position:
               
chr4:44665728-44665205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
78-598
               

               
Cow position:
               
chr4:45918674-45919207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 96
               

               
Conread position:
               
78-601
               

               
Cow position:
               
chr4:22528740-22528211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 31
               

               
Conread position:
               
78-603
               

               
Cow position:
               
chr4:19313646-19314184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
176, 81
               

               
Conread position:
               
79-534
               

               
Cow position:
               
chr4:3990980-3990532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
178, 81
               

               
Conread position:
               
79-593
               

               
Cow position:
               
chr4:49001659-49001142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 96
               

               
Conread position:
               
80-453
               

               
Cow position:
               
chr4:34996817-34997194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
80-461
               

               
Cow position:
               
chr4:13668970-13668595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
195, 77
               

               
Conread position:
               
85-282
               

               
Cow position:
               
chr4:25917837-25917650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
85-458
               

               
Cow position:
               
chr4:53763467-53763101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
86-459
               

               
Cow position:
               
chr4:11187108-11187476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
118, 34
               

               
Conread position:
               
88-315
               

               
Cow position:
               
chr4:60041655-60041417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 181
               

               
Conread position:
               
88-460
               

               
Cow position:
               
chr4:19265224-19265599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 73
               

               
Conread position:
               
88-586
               

               
Cow position:
               
chr4:60897622-60897113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
115, 73
               

               
Conread position:
               
88-596
               

               
Cow position:
               
chr4:44496037-44496552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
91-443
               

               
Cow position:
               
chr4:65731273-65730911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
182, 81
               

               
Conread position:
               
91-460
               

               
Cow position:
               
chr4:42424146-42423779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
177, 29
               

               
Conread position:
               
91-498
               

               
Cow position:
               
chr4:44782028-44782444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
113, 70
               

               
Conread position:
               
92-455
               

               
Cow position:
               
chr4:58512921-58512540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
92-498
               

               
Cow position:
               
chr4:56240191-56239790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
112, 65
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr4:19791453-19791677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
94-468
               

               
Cow position:
               
chr4:47351464-47351838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
97-528
               

               
Cow position:
               
chr4:68764177-68764620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 64
               

               
Conread position:
               
100-455
               

               
Cow position:
               
chr4:45589924-45589577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
157, 60
               

               
Conread position:
               
100-461
               

               
Cow position:
               
chr4:1060599-1060244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
106-490
               

               
Cow position:
               
chr4:22010389-22009996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
109-593
               

               
Cow position:
               
chr4:3836931-3837455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
46, 162
               

               
Conread position:
               
110-377
               

               
Cow position:
               
chr4:21064328-21064061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
110-460
               

               
Cow position:
               
chr4:49629156-49629507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 147
               

               
Conread position:
               
110-461
               

               
Cow position:
               
chr4:570469-570819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
149, 50
               

               
Conread position:
               
110-466
               

               
Cow position:
               
chr4:37915656-37915304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
110-469
               

               
Cow position:
               
chr4:4736710-4737050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
203, 52
               

               
Conread position:
               
110-593
               

               
Cow position:
               
chr4:10412055-10412538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
111-529
               

               
Cow position:
               
chr4:509224-508803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
113-391
               

               
Cow position:
               
chr4:59833611-59833903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
113-443
               

               
Cow position:
               
chr4:69508963-69509304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 144
               

               
Conread position:
               
114-443
               

               
Cow position:
               
chr4:19561372-19561689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
114-443
               

               
Cow position:
               
chr4:23060330-23059987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
114-609
               

               
Cow position:
               
chr4:37935604-37935097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
123-606
               

               
Cow position:
               
chr4:6208141-6208637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 141
               

               
Conread position:
               
129-557
               

               
Cow position:
               
chr4:23451404-23450960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
147-403
               

               
Cow position:
               
chr4:24414985-24415256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
149-540
               

               
Cow position:
               
chr4:41186200-41185803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
152-609
               

               
Cow position:
               
chr4:28772362-28771867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
155-488
               

               
Cow position:
               
chr4:33395979-33395638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 53
               

               
Conread position:
               
156-458
               

               
Cow position:
               
chr4:3251828-3251526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
156-494
               

               
Cow position:
               
chr4:9845631-9845979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
156-498
               

               
Cow position:
               
chr4:5461143-5460791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
156-564
               

               
Cow position:
               
chr4:40623373-40622962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
159-602
               

               
Cow position:
               
chr4:58858444-58858000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
160-577
               

               
Cow position:
               
chr4:51122771-51123220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 206
               

               
Conread position:
               
164-285
               

               
Cow position:
               
chr4:5924805-5924683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
164-309
               

               
Cow position:
               
chr4:34044034-34043891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
164-447
               

               
Cow position:
               
chr4:19542514-19542808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 235
               

               
Conread position:
               
164-466
               

               
Cow position:
               
chr4:59106093-59105792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
164-498
               

               
Cow position:
               
chr4:54930698-54930352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
164-501
               

               
Cow position:
               
chr4:36755467-36755813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
164-546
               

               
Cow position:
               
chr4:33030279-33030672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
164-567
               

               
Cow position:
               
chr4:61624872-61624445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 217
               

               
Conread position:
               
164-608
               

               
Cow position:
               
chr4:20279058-20279506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 170
               

               
Conread position:
               
165-466
               

               
Cow position:
               
chr4:1405259-1405571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
44, 95
               

               
Conread position:
               
172-385
               

               
Cow position:
               
chr4:7213859-7213630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
172-455
               

               
Cow position:
               
chr4:45662774-45662490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
172-533
               

               
Cow position:
               
chr4:45775615-45775228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
106, 90
               

               
Conread position:
               
172-609
               

               
Cow position:
               
chr4:59785042-59785525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
173-529
               

               
Cow position:
               
chr4:7571136-7571515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
174-461
               

               
Cow position:
               
chr4:17052870-17052566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
176-458
               

               
Cow position:
               
chr4:4321276-4320978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
176-596
               

               
Cow position:
               
chr4:8801235-8801679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
177-524
               

               
Cow position:
               
chr4:44451261-44451611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
177-602
               

               
Cow position:
               
chr4:35471063-35471495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
32, 87
               

               
Conread position:
               
178-448
               

               
Cow position:
               
chr4:46597115-46597393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
178-597
               

               
Cow position:
               
chr4:56570537-56570982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
91, 80
               

               
Conread position:
               
178-598
               

               
Cow position:
               
chr4:30131094-30131509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
178-603
               

               
Cow position:
               
chr4:2141478-2141906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
97, 80
               

               
Conread position:
               
179-498
               

               
Cow position:
               
chr4:34630635-34630968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
180-460
               

               
Cow position:
               
chr4:46550118-46550406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
180-460
               

               
Cow position:
               
chr4:58261419-58261124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
180-478
               

               
Cow position:
               
chr4:20299003-20299321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
180-498
               

               
Cow position:
               
chr4:21874566-21874872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
180-511
               

               
Cow position:
               
chr4:36730924-36731273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
180-603
               

               
Cow position:
               
chr4:62411608-62412031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
181-426
               

               
Cow position:
               
chr4:26746219-26746475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
181-456
               

               
Cow position:
               
chr4:27561131-27561419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
181-461
               

               
Cow position:
               
chr4:46060681-46060969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 168
               

               
Conread position:
               
181-464
               

               
Cow position:
               
chr4:34641994-34641695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
181-595
               

               
Cow position:
               
chr4:21365149-21365573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
182-594
               

               
Cow position:
               
chr4:3283713-3283266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
184-461
               

               
Cow position:
               
chr4:63119493-63119212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
184-491
               

               
Cow position:
               
chr4:47348570-47348889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
184-530
               

               
Cow position:
               
chr4:55395506-55395868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
184-559
               

               
Cow position:
               
chr4:66548015-66547631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
184-583
               

               
Cow position:
               
chr4:68795567-68795138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
184-585
               

               
Cow position:
               
chr4:5797705-5798125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
184-585
               

               
Cow position:
               
chr4:31172404-31172833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
184-598
               

               
Cow position:
               
chr4:10968647-10968205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
184-598
               

               
Cow position:
               
chr4:22249705-22249276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
184-603
               

               
Cow position:
               
chr4:26373932-26373501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
184-608
               

               
Cow position:
               
chr4:49424576-49424986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
184-609
               

               
Cow position:
               
chr4:961925-961462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
188-601
               

               
Cow position:
               
chr4:53752256-53752705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
189-449
               

               
Cow position:
               
chr4:30690467-30690730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
189-460
               

               
Cow position:
               
chr4:45367479-45367765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
189-474
               

               
Cow position:
               
chr4:51866737-51867036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 161
               

               
Conread position:
               
189-569
               

               
Cow position:
               
chr4:41867187-41867580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
189-598
               

               
Cow position:
               
chr4:14505257-14504856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
190-571
               

               
Cow position:
               
chr4:18439829-18439422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 400
               

               
Conread position:
               
190-604
               

               
Cow position:
               
chr4:40823371-40822932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
191-405
               

               
Cow position:
               
chr4:40410375-40410153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
191-598
               

               
Cow position:
               
chr4:27372111-27371691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr4:49089540-49089790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
192-458
               

               
Cow position:
               
chr4:58433465-58433195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
192-585
               

               
Cow position:
               
chr4:20157667-20157254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
192-603
               

               
Cow position:
               
chr4:35869961-35870382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
192-606
               

               
Cow position:
               
chr4:12676559-12676995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
193-458
               

               
Cow position:
               
chr4:6792189-6792462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 65
               

               
Conread position:
               
195-462
               

               
Cow position:
               
chr4:19322330-19322049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
195-595
               

               
Cow position:
               
chr4:65842013-65841602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
197-596
               

               
Cow position:
               
chr4:21258971-21259395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
199-474
               

               
Cow position:
               
chr4:13043024-13043307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
199-498
               

               
Cow position:
               
chr4:21233118-21232804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 222
               

               
Conread position:
               
199-514
               

               
Cow position:
               
chr4:13255849-13256167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
199-608
               

               
Cow position:
               
chr4:29291275-29291708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
202-498
               

               
Cow position:
               
chr4:65431902-65432220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 149
               

               
Conread position:
               
203-445
               

               
Cow position:
               
chr4:65538650-65538406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
203-457
               

               
Cow position:
               
chr4:51408205-51407947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
203-462
               

               
Cow position:
               
chr4:14919757-14920021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
203-498
               

               
Cow position:
               
chr4:54455586-54455273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
203-603
               

               
Cow position:
               
chr4:13406464-13406872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
204-458
               

               
Cow position:
               
chr4:52497816-52497574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
207-521
               

               
Cow position:
               
chr4:13871691-13871991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
237, 55
               

               
Conread position:
               
209-564
               

               
Cow position:
               
chr4:14550614-14550974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
213-609
               

               
Cow position:
               
chr4:9547747-9548136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
215-454
               

               
Cow position:
               
chr4:46861822-46861574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
218-598
               

               
Cow position:
               
chr4:22860933-22860535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
219-586
               

               
Cow position:
               
chr4:41602622-41603003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
219-601
               

               
Cow position:
               
chr4:36945418-36945017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 40
               

               
Conread position:
               
221-497
               

               
Cow position:
               
chr4:44973418-44973703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
225-608
               

               
Cow position:
               
chr4:30671612-30671231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
262-596
               

               
Cow position:
               
chr4:9681126-9681481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
268-597
               

               
Cow position:
               
chr4:17774526-17774174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 59
               

               
Conread position:
               
268-603
               

               
Cow position:
               
chr4:39616818-39617140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
268-609
               

               
Cow position:
               
chr4:41371110-41370738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
269-498
               

               
Cow position:
               
chr4:51768943-51769173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
273-460
               

               
Cow position:
               
chr4:21517170-21516977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
273-598
               

               
Cow position:
               
chr4:53616672-53617001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
274-490
               

               
Cow position:
               
chr4:27344836-27344619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
274-596
               

               
Cow position:
               
chr4:34369618-34369275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
23, 109
               

               
Conread position:
               
274-598
               

               
Cow position:
               
chr4:36075922-36075599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
274-598
               

               
Cow position:
               
chr4:50769931-50769593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
274-602
               

               
Cow position:
               
chr4:36929152-36929493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
274-602
               

               
Cow position:
               
chr4:39767184-39767527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
274-603
               

               
Cow position:
               
chr4:22235180-22235504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
277-454
               

               
Cow position:
               
chr4:63784284-63784100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 126
               

               
Conread position:
               
277-498
               

               
Cow position:
               
chr4:13941297-13941526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 124
               

               
Conread position:
               
277-606
               

               
Cow position:
               
chr4:23166742-23167079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 194
               

               
Conread position:
               
278-477
               

               
Cow position:
               
chr4:44676035-44676238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
278-544
               

               
Cow position:
               
chr4:45952531-45952268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
282-608
               

               
Cow position:
               
chr4:52087778-52088109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
285-595
               

               
Cow position:
               
chr4:48409418-48409096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
288-451
               

               
Cow position:
               
chr4:45116210-45116040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
288-488
               

               
Cow position:
               
chr4:41154495-41154701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 200
               

               
Conread position:
               
288-603
               

               
Cow position:
               
chr4:16881512-16881176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
288-603
               

               
Cow position:
               
chr4:23758655-23758980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 158
               

               
Conread position:
               
288-609
               

               
Cow position:
               
chr4:51605757-51605436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
289-592
               

               
Cow position:
               
chr4:37880784-37881099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 273
               

               
Conread position:
               
290-597
               

               
Cow position:
               
chr4:2597013-2596699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
292-608
               

               
Cow position:
               
chr4:33091234-33091553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
298-581
               

               
Cow position:
               
chr4:44449645-44449349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
304-602
               

               
Cow position:
               
chr4:5913482-5913167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
304-607
               

               
Cow position:
               
chr4:20066354-20066034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
29, 242
               

               
Conread position:
               
306-507
               

               
Cow position:
               
chr4:33667073-33667276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
306-608
               

               
Cow position:
               
chr4:55937775-55938083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
311-602
               

               
Cow position:
               
chr4:5580435-5580736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
312-597
               

               
Cow position:
               
chr4:30761-30467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
322-598
               

               
Cow position:
               
chr4:21250140-21249854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
323-593
               

               
Cow position:
               
chr4:34700153-34699857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
324-602
               

               
Cow position:
               
chr4:9198857-9199148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
138, 70
               

               
Conread position:
               
326-583
               

               
Cow position:
               
chr4:21862971-21862711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
328-596
               

               
Cow position:
               
chr4:29709871-29709588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
330-537
               

               
Cow position:
               
chr4:48283384-48283174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
331-593
               

               
Cow position:
               
chr4:40434006-40433737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
71, 220
               

               
Conread position:
               
336-601
               

               
Cow position:
               
chr4:28065847-28065573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
345-603
               

               
Cow position:
               
chr4:63472162-63471893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 49
               

               
Conread position:
               
347-602
               

               
Cow position:
               
chr4:22449607-22449344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
355-608
               

               
Cow position:
               
chr4:184213-184471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
358-595
               

               
Cow position:
               
chr4:60030830-60031074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
360-601
               

               
Cow position:
               
chr4:38700229-38699980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
368-603
               

               
Cow position:
               
chr4:37035300-37035056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
383-598
               

               
Cow position:
               
chr4:1799857-1800079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 160
               

               
Conread position:
               
386-608
               

               
Cow position:
               
chr4:9799959-9800187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
396-602
               

               
Cow position:
               
chr4:45871904-45871688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 172
               

               
Conread position:
               
401-608
               

               
Cow position:
               
chr4:17304426-17304208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 206
               

               
Conread position:
               
401-608
               

               
Cow position:
               
chr4:44279969-44279751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
403-594
               

               
Cow position:
               
chr4:24415535-24415723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
421-597
               

               
Cow position:
               
chr4:24432966-24433152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
428-600
               

               
Cow position:
               
chr4:51433404-51433586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
429-603
               

               
Cow position:
               
chr4:2169063-2169247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
430-603
               

               
Cow position:
               
chr4:10836172-10836356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 162
               

               
Conread position:
               
439-607
               

               
Cow position:
               
chr4:18956653-18956482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
443-601
               

               
Cow position:
               
chr4:45115770-45115602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
451-604
               

               
Cow position:
               
chr4:34762313-34762156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
459-587
               

               
Cow position:
               
chr4:20599962-20600097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               
Show alignments to all cow chromosomes.