Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005213_E07.5
        

               Conread position:
               1-391
               

               Cow position:
               chrX:48287841-48287457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               279, 49
               

               Conread position:
               1-400
               

               Cow position:
               chrX:25281900-25281476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 279
               

               Conread position:
               1-436
               

               Cow position:
               chrX:12115631-12116083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               311
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               54, 168
               

               Conread position:
               1-453
               

               Cow position:
               chrX:40827155-40826698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               311
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               55, 165
               

               Conread position:
               1-459
               

               Cow position:
               chrX:46532930-46532436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               331
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               29, 35
               

               Conread position:
               1-464
               

               Cow position:
               chrX:1331523-1332003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 166
               

               Conread position:
               1-558
               

               Cow position:
               chrX:15147592-15147029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 102
               

               Conread position:
               2-148
               

               Cow position:
               chrX:28878664-28878509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-151
               

               Cow position:
               chrX:19772028-19771869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               2-151
               

               Cow position:
               chrX:21662687-21662843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-153
               

               Cow position:
               chrX:25816664-25816505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               2-154
               

               Cow position:
               chrX:10438060-10437899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-154
               

               Cow position:
               chrX:24366359-24366199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-156
               

               Cow position:
               chrX:2366958-2367106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               2-157
               

               Cow position:
               chrX:37781490-37781331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-159
               

               Cow position:
               chrX:4482542-4482694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               2-159
               

               Cow position:
               chrX:6695759-6695589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               2-159
               

               Cow position:
               chrX:8517193-8517364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               2-159
               

               Cow position:
               chrX:16086533-16086368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-159
               

               Cow position:
               chrX:16324662-16324491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               2-159
               

               Cow position:
               chrX:20675690-20675856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-159
               

               Cow position:
               chrX:22901068-22900903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-159
               

               Cow position:
               chrX:33589725-33589895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               2-160
               

               Cow position:
               chrX:30093773-30093607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-163
               

               Cow position:
               chrX:36975435-36975604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               2-164
               

               Cow position:
               chrX:12980756-12980585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-168
               

               Cow position:
               chrX:6406936-6407113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-170
               

               Cow position:
               chrX:4750782-4750609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 112
               

               Conread position:
               2-170
               

               Cow position:
               chrX:25575550-25575732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-170
               

               Cow position:
               chrX:38852750-38852926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-172
               

               Cow position:
               chrX:14030609-14030786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-173
               

               Cow position:
               chrX:13266239-13266055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               48, 173
               

               Conread position:
               2-174
               

               Cow position:
               chrX:2715213-2715392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-174
               

               Cow position:
               chrX:16222217-16222395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-174
               

               Cow position:
               chrX:17892134-17892313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-174
               

               Cow position:
               chrX:22603848-22603669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-174
               

               Cow position:
               chrX:30825239-30825418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-174
               

               Cow position:
               chrX:32331222-32331401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-174
               

               Cow position:
               chrX:39757624-39757803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-183
               

               Cow position:
               chrX:20167744-20167933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 168
               

               Conread position:
               2-183
               

               Cow position:
               chrX:38549000-38549195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 119
               

               Conread position:
               2-201
               

               Cow position:
               chrX:17291521-17291728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               2-211
               

               Cow position:
               chrX:22522240-22522031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-211
               

               Cow position:
               chrX:28314016-28314225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-216
               

               Cow position:
               chrX:10256551-10256339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 127
               

               Conread position:
               2-226
               

               Cow position:
               chrX:3596476-3596244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-226
               

               Cow position:
               chrX:22449505-22449734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 167
               

               Conread position:
               2-241
               

               Cow position:
               chrX:39185764-39186003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-243
               

               Cow position:
               chrX:42221977-42221741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               2-246
               

               Cow position:
               chrX:5280262-5280018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-250
               

               Cow position:
               chrX:24975535-24975775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-250
               

               Cow position:
               chrX:26617330-26617082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-250
               

               Cow position:
               chrX:26759977-26759730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-250
               

               Cow position:
               chrX:27749418-27749167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-250
               

               Cow position:
               chrX:45237057-45237305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-269
               

               Cow position:
               chrX:7486455-7486721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-269
               

               Cow position:
               chrX:13686308-13686572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-269
               

               Cow position:
               chrX:21862079-21861816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               2-269
               

               Cow position:
               chrX:39015567-39015293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 79
               

               Conread position:
               2-271
               

               Cow position:
               chrX:671418-671150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-271
               

               Cow position:
               chrX:5334228-5333962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:5408646-5408914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               2-271
               

               Cow position:
               chrX:5892819-5893087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:6558441-6558712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 156
               

               Conread position:
               2-271
               

               Cow position:
               chrX:6652481-6652213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 156
               

               Conread position:
               2-271
               

               Cow position:
               chrX:9153951-9154219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:9169023-9168755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:10351452-10351720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:10992209-10992477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:11566505-11566773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-271
               

               Cow position:
               chrX:12360479-12360748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:13091570-13091303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 112
               

               Conread position:
               2-271
               

               Cow position:
               chrX:14458576-14458309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 156
               

               Conread position:
               2-271
               

               Cow position:
               chrX:15346378-15346110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:15596642-15596896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 137
               

               Conread position:
               2-271
               

               Cow position:
               chrX:15620941-15620673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-271
               

               Cow position:
               chrX:16046739-16047008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-271
               

               Cow position:
               chrX:17980186-17980454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:18024631-18024898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 79
               

               Conread position:
               2-271
               

               Cow position:
               chrX:18223004-18223271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:19109450-19109182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:19674239-19674507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:21768395-21768663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:22612977-22613245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-271
               

               Cow position:
               chrX:23109353-23109618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:24467534-24467266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-271
               

               Cow position:
               chrX:24809379-24809112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-271
               

               Cow position:
               chrX:28588561-28588829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:29226067-29226335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-271
               

               Cow position:
               chrX:29912930-29913198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 112
               

               Conread position:
               2-271
               

               Cow position:
               chrX:30196888-30197156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:30199401-30199133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:30940772-30941040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:30965692-30965960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:31605275-31605543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:32871195-32870928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               55, 168
               

               Conread position:
               2-271
               

               Cow position:
               chrX:33763935-33764203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:34413367-34413635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-271
               

               Cow position:
               chrX:36535144-36534876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-271
               

               Cow position:
               chrX:40591277-40591545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-271
               

               Cow position:
               chrX:47317997-47318265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-273
               

               Cow position:
               chrX:30836964-30837234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-273
               

               Cow position:
               chrX:47211261-47210987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               43, 170
               

               Conread position:
               2-274
               

               Cow position:
               chrX:7119053-7118782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 168
               

               Conread position:
               2-274
               

               Cow position:
               chrX:14262245-14261964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 173
               

               Conread position:
               2-281
               

               Cow position:
               chrX:6869972-6869695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 156
               

               Conread position:
               2-282
               

               Cow position:
               chrX:2274508-2274786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-282
               

               Cow position:
               chrX:3464485-3464209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-282
               

               Cow position:
               chrX:8641379-8641657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-282
               

               Cow position:
               chrX:14598437-14598714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 166
               

               Conread position:
               2-282
               

               Cow position:
               chrX:15531561-15531286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-282
               

               Cow position:
               chrX:24173574-24173299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-282
               

               Cow position:
               chrX:24735534-24735807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               2-282
               

               Cow position:
               chrX:26275730-26276008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 163
               

               Conread position:
               2-282
               

               Cow position:
               chrX:26974501-26974779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-282
               

               Cow position:
               chrX:27626946-27627224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-282
               

               Cow position:
               chrX:29841578-29841300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-282
               

               Cow position:
               chrX:29903333-29903612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 156
               

               Conread position:
               2-282
               

               Cow position:
               chrX:33538518-33538818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               53, 274
               

               Conread position:
               2-282
               

               Cow position:
               chrX:37403432-37403153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-282
               

               Cow position:
               chrX:42120894-42121172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-282
               

               Cow position:
               chrX:42591316-42591594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-284
               

               Cow position:
               chrX:12096655-12096373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               56, 79
               

               Conread position:
               2-284
               

               Cow position:
               chrX:27997241-27997517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-285
               

               Cow position:
               chrX:2103996-2104279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-313
               

               Cow position:
               chrX:4123427-4123741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               59, 166
               

               Conread position:
               2-315
               

               Cow position:
               chrX:806848-807151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               147, 58
               

               Conread position:
               2-320
               

               Cow position:
               chrX:45658489-45658157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               49, 166
               

               Conread position:
               2-327
               

               Cow position:
               chrX:25302149-25301827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               2-327
               

               Cow position:
               chrX:48423526-48423851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-346
               

               Cow position:
               chrX:39556224-39555886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               2-350
               

               Cow position:
               chrX:48370686-48371045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 168
               

               Conread position:
               2-363
               

               Cow position:
               chrX:7513082-7513478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               56, 240
               

               Conread position:
               2-369
               

               Cow position:
               chrX:21666000-21665622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               2-377
               

               Cow position:
               chrX:27019796-27020165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 104
               

               Conread position:
               2-379
               

               Cow position:
               chrX:38967242-38967628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               2-391
               

               Cow position:
               chrX:15486034-15485632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               293
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               54, 159
               

               Conread position:
               2-402
               

               Cow position:
               chrX:38051841-38051427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-403
               

               Cow position:
               chrX:35609577-35609993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-408
               

               Cow position:
               chrX:36692830-36693246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               287
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               54, 163
               

               Conread position:
               2-415
               

               Cow position:
               chrX:19023018-19023460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 115
               

               Conread position:
               2-425
               

               Cow position:
               chrX:41790840-41790418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               47, 87
               

               Conread position:
               2-426
               

               Cow position:
               chrX:7755492-7755931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               292
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 165
               

               Conread position:
               2-426
               

               Cow position:
               chrX:10444824-10444384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-433
               

               Cow position:
               chrX:27442961-27442524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 159
               

               Conread position:
               2-434
               

               Cow position:
               chrX:9085742-9085296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               303
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-434
               

               Cow position:
               chrX:26229913-26229476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-441
               

               Cow position:
               chrX:32128403-32127951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 280
               

               Conread position:
               2-446
               

               Cow position:
               chrX:11581528-11581980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               310
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               56, 82
               

               Conread position:
               2-446
               

               Cow position:
               chrX:36195683-36196149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-447
               

               Cow position:
               chrX:27422690-27422229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-450
               

               Cow position:
               chrX:15139958-15139497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               311
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               52, 131
               

               Conread position:
               2-451
               

               Cow position:
               chrX:35680935-35681393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 59
               

               Conread position:
               2-453
               

               Cow position:
               chrX:1781496-1781963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               314
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:1976006-1975541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               318
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:2417893-2417427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               318
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:2664600-2665066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               316
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:3078996-3078531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:3157209-3157675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               317
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:3387697-3388163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               317
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:5646513-5646047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:7311584-7312050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-453
               

               Cow position:
               chrX:9018712-9018246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:9953706-9954192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 359
               

               Conread position:
               2-453
               

               Cow position:
               chrX:10922980-10922514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               317
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:13447861-13448327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               317
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:15260028-15259562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-453
               

               Cow position:
               chrX:15781172-15781638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               317
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:16735115-16735581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               309
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:18451488-18451034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:19495369-19494903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               319
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:19774889-19774423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:20098913-20099379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               317
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:22557092-22557558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               321
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:22609001-22608535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               318
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:23047371-23047835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:23969949-23970432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 279
               

               Conread position:
               2-453
               

               Cow position:
               chrX:24509458-24509924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:27759298-27759764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               309
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               53, 167
               

               Conread position:
               2-453
               

               Cow position:
               chrX:28555844-28555378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               314
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:32039251-32038786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               2-453
               

               Cow position:
               chrX:36729975-36730443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               317
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:37772843-37772376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               313
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 156
               

               Conread position:
               2-453
               

               Cow position:
               chrX:37958088-37958554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-453
               

               Cow position:
               chrX:44168719-44168252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-454
               

               Cow position:
               chrX:5423475-5423008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               309
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-454
               

               Cow position:
               chrX:10528183-10527717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-454
               

               Cow position:
               chrX:18462384-18461918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               313
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-454
               

               Cow position:
               chrX:27404354-27403888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-454
               

               Cow position:
               chrX:30172119-30171652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               312
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-454
               

               Cow position:
               chrX:37061200-37060733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-454
               

               Cow position:
               chrX:37764606-37764139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               311
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 156
               

               Conread position:
               2-455
               

               Cow position:
               chrX:9854864-9855353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 360
               

               Conread position:
               2-455
               

               Cow position:
               chrX:10932263-10932731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               308
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:2160356-2160827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:4622363-4621892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:5123768-5123299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:5289096-5288625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               320
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-458
               

               Cow position:
               chrX:5406649-5407117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               307
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-458
               

               Cow position:
               chrX:6566665-6567136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:8530131-8530602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:10428131-10428601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:11672372-11672843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               314
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:11715871-11715400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               311
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               53, 167
               

               Conread position:
               2-458
               

               Cow position:
               chrX:12145686-12146156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:12249392-12249869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 166
               

               Conread position:
               2-458
               

               Cow position:
               chrX:12458289-12458762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:13071010-13070540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               308
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 112
               

               Conread position:
               2-458
               

               Cow position:
               chrX:14134066-14134537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:16285802-16286271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               310
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:19473569-19473098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 33
               

               Conread position:
               2-458
               

               Cow position:
               chrX:20032240-20031772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               304
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               2-458
               

               Cow position:
               chrX:22077918-22078389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:23139904-23140371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:25276908-25276437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               322
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:25289088-25288617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               322
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:30531439-30530966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               317
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:30752365-30752836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               313
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:30981573-30981103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               2-458
               

               Cow position:
               chrX:34285473-34285001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               321
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:38014685-38015156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 167
               

               Conread position:
               2-458
               

               Cow position:
               chrX:38230676-38230205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               312
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:38330973-38331428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               59, 167
               

               Conread position:
               2-458
               

               Cow position:
               chrX:43511007-43511481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 160
               

               Conread position:
               2-458
               

               Cow position:
               chrX:45903769-45904240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-458
               

               Cow position:
               chrX:47608004-47608475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               314
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 168
               

               Conread position:
               2-459
               

               Cow position:
               chrX:34554326-34554782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               319
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               42, 111
               

               Conread position:
               2-459
               

               Cow position:
               chrX:34754601-34754137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 167
               

               Conread position:
               2-460
               

               Cow position:
               chrX:29289167-29289638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               327
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 168
               

               Conread position:
               2-460
               

               Cow position:
               chrX:32623157-32623631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 263
               

               Conread position:
               2-461
               

               Cow position:
               chrX:3405765-3405298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               306
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               56, 168
               

               Conread position:
               2-461
               

               Cow position:
               chrX:10866276-10865814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 167
               

               Conread position:
               2-461
               

               Cow position:
               chrX:19022718-19022244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-461
               

               Cow position:
               chrX:20888053-20887580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               2-461
               

               Cow position:
               chrX:24105218-24105685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               328
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               2-461
               

               Cow position:
               chrX:28847291-28846832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               326
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               45, 169
               

               Conread position:
               2-461
               

               Cow position:
               chrX:31949339-31948874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 108
               

               Conread position:
               2-461
               

               Cow position:
               chrX:32419780-32420273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 278
               

               Conread position:
               2-461
               

               Cow position:
               chrX:34543355-34543845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               2-461
               

               Cow position:
               chrX:34761657-34762131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               309
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-461
               

               Cow position:
               chrX:38577123-38577575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               326
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               37, 32
               

               Conread position:
               2-461
               

               Cow position:
               chrX:40269067-40269552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 167
               

               Conread position:
               2-462
               

               Cow position:
               chrX:32010622-32011098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               321
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-463
               

               Cow position:
               chrX:40481280-40480806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-463
               

               Cow position:
               chrX:42462157-42461682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 168
               

               Conread position:
               2-464
               

               Cow position:
               chrX:361862-361385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:1576672-1576195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:2151341-2150867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:3361412-3361886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 154
               

               Conread position:
               2-464
               

               Cow position:
               chrX:3417548-3417072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               312
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:4343340-4343817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               308
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:5599387-5598910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:5866737-5867213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:7444675-7445151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               321
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:8782335-8782812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               316
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:11358474-11357991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               321
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:11663769-11664246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:12001556-12001079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:13384998-13385476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               322
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:13396660-13396185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               2-464
               

               Cow position:
               chrX:13971636-13971159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:14122160-14121684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 99
               

               Conread position:
               2-464
               

               Cow position:
               chrX:15114262-15114739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               308
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:17995050-17995527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:18656214-18655737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               316
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:20321176-20320700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               316
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               28, 156
               

               Conread position:
               2-464
               

               Cow position:
               chrX:22772246-22772723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 37
               

               Conread position:
               2-464
               

               Cow position:
               chrX:24769269-24768796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:24969225-24968748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:28058204-28057727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:30159404-30158943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               308
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               207, 28
               

               Conread position:
               2-464
               

               Cow position:
               chrX:30822175-30822652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:31814298-31813821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:34519317-34519793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               317
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:35533442-35533919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:37816179-37816656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:38442553-38443030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:39292152-39291693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-464
               

               Cow position:
               chrX:39560061-39559584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:39714142-39714617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               2-464
               

               Cow position:
               chrX:41488574-41488098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               322
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:42459763-42460249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-464
               

               Cow position:
               chrX:46297251-46297728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               2-466
               

               Cow position:
               chrX:8899616-8900092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 166
               

               Conread position:
               2-466
               

               Cow position:
               chrX:38934846-38935349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               338
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               56, 369
               

               Conread position:
               2-466
               

               Cow position:
               chrX:41879339-41878864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               2-473
               

               Cow position:
               chrX:38072176-38071692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               334
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               55, 150
               

               Conread position:
               2-477
               

               Cow position:
               chrX:13648193-13647706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               333
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               2-477
               

               Cow position:
               chrX:28024854-28025344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-479
               

               Cow position:
               chrX:34238311-34238802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 169
               

               Conread position:
               2-481
               

               Cow position:
               chrX:6372772-6373257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               322
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               2-490
               

               Cow position:
               chrX:7571494-7572001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 170
               

               Conread position:
               2-490
               

               Cow position:
               chrX:14884371-14883860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               522
               

               Alignm identity:
               344
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               2-490
               

               Cow position:
               chrX:26441189-26440689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 161
               

               Conread position:
               2-490
               

               Cow position:
               chrX:45113227-45113715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               342
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               2-497
               

               Cow position:
               chrX:3130156-3130675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               340
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               2-497
               

               Cow position:
               chrX:4633266-4632754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               356
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               44, 151
               

               Conread position:
               2-498
               

               Cow position:
               chrX:878779-878276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 163
               

               Conread position:
               2-498
               

               Cow position:
               chrX:31489103-31489624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               359
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               2-498
               

               Cow position:
               chrX:42470346-42469837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-502
               

               Cow position:
               chrX:8796842-8797357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 120
               

               Conread position:
               2-509
               

               Cow position:
               chrX:37232002-37232522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               366
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               53, 157
               

               Conread position:
               2-517
               

               Cow position:
               chrX:28111085-28111637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 94
               

               Conread position:
               2-520
               

               Cow position:
               chrX:24288322-24287812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               348
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               53, 163
               

               Conread position:
               2-529
               

               Cow position:
               chrX:35288245-35288795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               375
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               48, 155
               

               Conread position:
               2-530
               

               Cow position:
               chrX:14599127-14599673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               375
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               2-534
               

               Cow position:
               chrX:30162597-30163150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 48
               

               Conread position:
               2-558
               

               Cow position:
               chrX:27705184-27705755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               593
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               2-571
               

               Cow position:
               chrX:20801362-20801945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               608
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 195
               

               Conread position:
               2-581
               

               Cow position:
               chrX:39125905-39126515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 236
               

               Conread position:
               2-585
               

               Cow position:
               chrX:1616466-1615842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               633
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 168
               

               Conread position:
               2-585
               

               Cow position:
               chrX:41192280-41192905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               422
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 168
               

               Conread position:
               2-593
               

               Cow position:
               chrX:31261046-31260401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               657
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 172
               

               Conread position:
               2-594
               

               Cow position:
               chrX:15329244-15329847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 166
               

               Conread position:
               2-597
               

               Cow position:
               chrX:161019-161628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               422
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               53, 167
               

               Conread position:
               2-597
               

               Cow position:
               chrX:25337784-25338392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               629
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 48
               

               Conread position:
               2-598
               

               Cow position:
               chrX:39546388-39545782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 173
               

               Conread position:
               2-598
               

               Cow position:
               chrX:45501739-45502364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               412
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 163
               

               Conread position:
               2-599
               

               Cow position:
               chrX:17964925-17964316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 35
               

               Conread position:
               2-601
               

               Cow position:
               chrX:24260022-24259368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               659
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 240
               

               Conread position:
               2-601
               

               Cow position:
               chrX:45967752-45968369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               638
               

               Alignm identity:
               400
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               2-602
               

               Cow position:
               chrX:12437644-12437050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 102
               

               Conread position:
               2-603
               

               Cow position:
               chrX:10412381-10411788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               619
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 48
               

               Conread position:
               2-603
               

               Cow position:
               chrX:27446281-27446917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               430
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               7, 160
               

               Conread position:
               2-603
               

               Cow position:
               chrX:38963704-38964333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               646
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 162
               

               Conread position:
               2-608
               

               Cow position:
               chrX:36840452-36841079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 173
               

               Conread position:
               3-168
               

               Cow position:
               chrX:2383054-2383219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-172
               

               Cow position:
               chrX:6493324-6493500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               3-174
               

               Cow position:
               chrX:323507-323685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               3-174
               

               Cow position:
               chrX:14407858-14407680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 166
               

               Conread position:
               3-174
               

               Cow position:
               chrX:23038405-23038227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               3-174
               

               Cow position:
               chrX:30228518-30228341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 115
               

               Conread position:
               3-183
               

               Cow position:
               chrX:13405705-13405516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               41, 170
               

               Conread position:
               3-226
               

               Cow position:
               chrX:30134896-30134673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               3-249
               

               Cow position:
               chrX:2479035-2478790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               43, 162
               

               Conread position:
               3-249
               

               Cow position:
               chrX:16703262-16703508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               3-249
               

               Cow position:
               chrX:16711546-16711792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               41, 166
               

               Conread position:
               3-249
               

               Cow position:
               chrX:27318808-27319054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               58, 159
               

               Conread position:
               3-249
               

               Cow position:
               chrX:35240456-35240702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               3-249
               

               Cow position:
               chrX:36794586-36794832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               3-249
               

               Cow position:
               chrX:37133942-37133696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               58, 162
               

               Conread position:
               3-250
               

               Cow position:
               chrX:21415680-21415931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               3-250
               

               Cow position:
               chrX:24280527-24280774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               55, 162
               

               Conread position:
               3-250
               

               Cow position:
               chrX:29760291-29760538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 156
               

               Conread position:
               3-257
               

               Cow position:
               chrX:525267-525522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 83
               

               Conread position:
               3-269
               

               Cow position:
               chrX:30139192-30138927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               55, 166
               

               Conread position:
               3-270
               

               Cow position:
               chrX:45786722-45786986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 167
               

               Conread position:
               3-271
               

               Cow position:
               chrX:3570043-3570310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 166
               

               Conread position:
               3-271
               

               Cow position:
               chrX:4905397-4905130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               3-271
               

               Cow position:
               chrX:7551203-7550937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               3-271
               

               Cow position:
               chrX:16706391-16706661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 169
               

               Conread position:
               3-271
               

               Cow position:
               chrX:16713789-16714056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 166
               

               Conread position:
               3-271
               

               Cow position:
               chrX:16853797-16853530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               3-271
               

               Cow position:
               chrX:18078318-18078051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               3-271
               

               Cow position:
               chrX:20878170-20877904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               41, 45
               

               Conread position:
               3-271
               

               Cow position:
               chrX:22493599-22493866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 166
               

               Conread position:
               3-271
               

               Cow position:
               chrX:23280599-23280865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               62, 165
               

               Conread position:
               3-271
               

               Cow position:
               chrX:24587862-24587595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 162
               

               Conread position:
               3-271
               

               Cow position:
               chrX:27977237-27976970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               3-271
               

               Cow position:
               chrX:30143692-30143426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 148
               

               Conread position:
               3-271
               

               Cow position:
               chrX:30180334-30180067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 165
               

               Conread position:
               3-271
               

               Cow position:
               chrX:41156903-41157170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               3-271
               

               Cow position:
               chrX:44086896-44087164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 160
               

               Conread position:
               3-282
               

               Cow position:
               chrX:1550542-1550819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               3-282
               

               Cow position:
               chrX:5306191-5306468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 155
               

               Conread position:
               3-282
               

               Cow position:
               chrX:5375961-5376238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 108
               

               Conread position:
               3-282
               

               Cow position:
               chrX:9651454-9651177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               54, 167
               

               Conread position:
               3-282
               

               Cow position:
               chrX:9898748-9898472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 10
               

               Conread position:
               3-282
               

               Cow position:
               chrX:10915630-10915907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               3-282
               

               Cow position:
               chrX:12466087-12466363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               41, 166
               

               Conread position:
               3-282
               

               Cow position:
               chrX:18118879-18118603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 108
               

               Conread position:
               3-282
               

               Cow position:
               chrX:18898059-18897787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               57, 166
               

               Conread position:
               3-282
               

               Cow position:
               chrX:21626368-21626082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 144
               

               Conread position:
               3-282
               

               Cow position:
               chrX:21785360-21785638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 134
               

               Conread position:
               3-282
               

               Cow position:
               chrX:22600824-22600548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               52, 166
               

               Conread position:
               3-282
               

               Cow position:
               chrX:22811478-22811754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               3-282
               

               Cow position:
               chrX:23316828-23316554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               3-282
               

               Cow position:
               chrX:25459045-25458768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               3-282
               

               Cow position:
               chrX:27105850-27106127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               3-282
               

               Cow position:
               chrX:27498359-27498637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 161
               

               Conread position:
               3-282
               

               Cow position:
               chrX:29864839-29864563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               3-282
               

               Cow position:
               chrX:31202432-31202709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 162
               

               Conread position:
               3-282
               

               Cow position:
               chrX:32094858-32094581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               42, 166
               

               Conread position:
               3-282
               

               Cow position:
               chrX:40545018-40544739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               42, 166
               

               Conread position:
               3-284
               

               Cow position:
               chrX:41103380-41103661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 166
               

               Conread position:
               3-285
               

               Cow position:
               chrX:24482778-24482495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               55, 165
               

               Conread position:
               3-285
               

               Cow position:
               chrX:39698920-39699201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               42, 164
               

               Conread position:
               3-311
               

               Cow position:
               chrX:5246840-5247157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               45, 172
               

               Conread position:
               3-317
               

               Cow position:
               chrX:27095711-27096031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 166
               

               Conread position:
               3-317
               

               Cow position:
               chrX:42733458-42733776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               43, 165
               

               Conread position:
               3-321
               

               Cow position:
               chrX:19399370-19399687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 166
               

               Conread position:
               3-349
               

               Cow position:
               chrX:21227066-21227419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 96
               

               Conread position:
               3-405
               

               Cow position:
               chrX:34376546-34376953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 170
               

               Conread position:
               3-444
               

               Cow position:
               chrX:34990652-34991080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               295
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               201, 48
               

               Conread position:
               3-450
               

               Cow position:
               chrX:40035877-40035392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               3-454
               

               Cow position:
               chrX:6196162-6195696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               314
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               3-454
               

               Cow position:
               chrX:23564205-23563737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 166
               

               Conread position:
               3-459
               

               Cow position:
               chrX:39174621-39174160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 166
               

               Conread position:
               3-460
               

               Cow position:
               chrX:20340297-20339832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 164
               

               Conread position:
               3-460
               

               Cow position:
               chrX:34532123-34532580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 167
               

               Conread position:
               3-460
               

               Cow position:
               chrX:44192850-44192387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               42, 122
               

               Conread position:
               3-461
               

               Cow position:
               chrX:16279241-16279714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               317
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               3-461
               

               Cow position:
               chrX:44054396-44054863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               329
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               54, 47
               

               Conread position:
               3-464
               

               Cow position:
               chrX:3649216-3648750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               303
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               52, 155
               

               Conread position:
               3-464
               

               Cow position:
               chrX:23299547-23300022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               36, 165
               

               Conread position:
               3-464
               

               Cow position:
               chrX:28646391-28645930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               309
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               41, 164
               

               Conread position:
               3-465
               

               Cow position:
               chrX:22888250-22888726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 166
               

               Conread position:
               3-466
               

               Cow position:
               chrX:26755037-26754576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 160
               

               Conread position:
               3-477
               

               Cow position:
               chrX:22538362-22537865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               333
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               43, 166
               

               Conread position:
               3-490
               

               Cow position:
               chrX:4996204-4996683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               509
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 128
               

               Conread position:
               3-490
               

               Cow position:
               chrX:17794587-17795077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               335
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 134
               

               Conread position:
               3-498
               

               Cow position:
               chrX:41884845-41884308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 351
               

               Conread position:
               3-606
               

               Cow position:
               chrX:35268485-35269093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               4-182
               

               Cow position:
               chrX:6203097-6203291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               4-249
               

               Cow position:
               chrX:30455029-30454784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               57, 161
               

               Conread position:
               4-250
               

               Cow position:
               chrX:28752747-28752501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 165
               

               Conread position:
               4-250
               

               Cow position:
               chrX:41846941-41846695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               4-284
               

               Cow position:
               chrX:10415932-10415655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 96
               

               Conread position:
               4-391
               

               Cow position:
               chrX:1055800-1055402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               54, 169
               

               Conread position:
               4-453
               

               Cow position:
               chrX:2362092-2362556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               316
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               4-455
               

               Cow position:
               chrX:11819952-11820407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               42, 97
               

               Conread position:
               4-461
               

               Cow position:
               chrX:28632884-28632424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               307
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               51, 84
               

               Conread position:
               5-271
               

               Cow position:
               chrX:6454290-6454554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               5-281
               

               Cow position:
               chrX:21495352-21495626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 164
               

               Conread position:
               5-453
               

               Cow position:
               chrX:626450-626003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 29
               

               Conread position:
               5-464
               

               Cow position:
               chrX:14409794-14409321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               320
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               7, 154
               

               Conread position:
               5-464
               

               Cow position:
               chrX:15504885-15505359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               318
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               25, 31
               

               Conread position:
               5-477
               

               Cow position:
               chrX:22812656-22813143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 164
               

               Conread position:
               5-601
               

               Cow position:
               chrX:36250268-36249667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 165
               

               Conread position:
               6-169
               

               Cow position:
               chrX:16790222-16790058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               6-183
               

               Cow position:
               chrX:44961308-44961494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               6-183
               

               Cow position:
               chrX:47243708-47243524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               6-282
               

               Cow position:
               chrX:27760935-27761209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               6-416
               

               Cow position:
               chrX:35409263-35409676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 28
               

               Conread position:
               6-447
               

               Cow position:
               chrX:17497691-17498132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 161
               

               Conread position:
               6-451
               

               Cow position:
               chrX:5017811-5017360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 164
               

               Conread position:
               6-460
               

               Cow position:
               chrX:1810564-1810100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 74
               

               Conread position:
               6-461
               

               Cow position:
               chrX:21592881-21593348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 156
               

               Conread position:
               6-466
               

               Cow position:
               chrX:48243857-48243400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 164
               

               Conread position:
               6-472
               

               Cow position:
               chrX:23583153-23583634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 163
               

               Conread position:
               6-477
               

               Cow position:
               chrX:27516129-27516602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 161
               

               Conread position:
               6-498
               

               Cow position:
               chrX:4044263-4043763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               6-498
               

               Cow position:
               chrX:11083019-11082518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 164
               

               Conread position:
               6-498
               

               Cow position:
               chrX:11455472-11454945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 221
               

               Conread position:
               6-498
               

               Cow position:
               chrX:34564895-34565388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 158
               

               Conread position:
               6-529
               

               Cow position:
               chrX:16284385-16283803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               399
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 285
               

               Conread position:
               6-530
               

               Cow position:
               chrX:28866392-28865865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               547
               

               Alignm identity:
               361
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               6-542
               

               Cow position:
               chrX:32743133-32743685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 165
               

               Conread position:
               6-598
               

               Cow position:
               chrX:31729053-31729666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               633
               

               Alignm identity:
               412
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               52, 163
               

               Conread position:
               6-602
               

               Cow position:
               chrX:15007556-15006925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               642
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 163
               

               Conread position:
               6-602
               

               Cow position:
               chrX:22624047-22624693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               657
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               6-603
               

               Cow position:
               chrX:39558772-39558149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               6-603
               

               Cow position:
               chrX:41122666-41123280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 164
               

               Conread position:
               6-608
               

               Cow position:
               chrX:6543851-6544484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 163
               

               Conread position:
               6-608
               

               Cow position:
               chrX:35223897-35224515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               636
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 162
               

               Conread position:
               7-153
               

               Cow position:
               chrX:18247942-18248091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               7-248
               

               Cow position:
               chrX:5353707-5353466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 162
               

               Conread position:
               7-249
               

               Cow position:
               chrX:26531555-26531796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               7-249
               

               Cow position:
               chrX:32144567-32144325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               54, 162
               

               Conread position:
               7-271
               

               Cow position:
               chrX:21833481-21833744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               48, 156
               

               Conread position:
               7-274
               

               Cow position:
               chrX:29849035-29848769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               48, 162
               

               Conread position:
               7-282
               

               Cow position:
               chrX:23121980-23122254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 131
               

               Conread position:
               7-282
               

               Cow position:
               chrX:24102575-24102848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               54, 162
               

               Conread position:
               7-284
               

               Cow position:
               chrX:11949897-11949620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               54, 162
               

               Conread position:
               7-396
               

               Cow position:
               chrX:35388311-35387907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               48, 161
               

               Conread position:
               7-455
               

               Cow position:
               chrX:15590276-15589816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               301
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 156
               

               Conread position:
               7-460
               

               Cow position:
               chrX:34441851-34441394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               7-557
               

               Cow position:
               chrX:12309790-12309218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 149
               

               Conread position:
               8-159
               

               Cow position:
               chrX:42381830-42381672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               47, 27
               

               Conread position:
               8-173
               

               Cow position:
               chrX:31745900-31745726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               8-249
               

               Cow position:
               chrX:18950142-18949907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               8-269
               

               Cow position:
               chrX:37377662-37377411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 28
               

               Conread position:
               8-271
               

               Cow position:
               chrX:2351659-2351921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               47, 162
               

               Conread position:
               8-271
               

               Cow position:
               chrX:5320123-5319858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               50, 163
               

               Conread position:
               8-271
               

               Cow position:
               chrX:12776389-12776127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 28
               

               Conread position:
               8-271
               

               Cow position:
               chrX:38151285-38151547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 161
               

               Conread position:
               8-315
               

               Cow position:
               chrX:29049572-29049876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               42, 77
               

               Conread position:
               8-416
               

               Cow position:
               chrX:20582627-20583038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 161
               

               Conread position:
               8-416
               

               Cow position:
               chrX:28097728-28098131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               8-453
               

               Cow position:
               chrX:10495830-10496290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 28
               

               Conread position:
               8-464
               

               Cow position:
               chrX:13785781-13785295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 263
               

               Conread position:
               8-498
               

               Cow position:
               chrX:6413643-6414145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               329
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               47, 160
               

               Conread position:
               8-498
               

               Cow position:
               chrX:8869788-8869298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               334
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               48, 162
               

               Conread position:
               8-498
               

               Cow position:
               chrX:38094928-38094416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 161
               

               Conread position:
               8-524
               

               Cow position:
               chrX:7277529-7278046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               366
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               8-527
               

               Cow position:
               chrX:13912690-13913207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 37
               

               Conread position:
               8-532
               

               Cow position:
               chrX:38439073-38439611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               554
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 42
               

               Conread position:
               8-602
               

               Cow position:
               chrX:11073614-11072987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 151
               

               Conread position:
               8-610
               

               Cow position:
               chrX:42994211-42994836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 161
               

               Conread position:
               9-151
               

               Cow position:
               chrX:33493330-33493480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               9-174
               

               Cow position:
               chrX:43730592-43730422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 158
               

               Conread position:
               9-183
               

               Cow position:
               chrX:33519177-33519360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               9-250
               

               Cow position:
               chrX:29723049-29723289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 160
               

               Conread position:
               9-271
               

               Cow position:
               chrX:14162789-14163050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 102
               

               Conread position:
               9-455
               

               Cow position:
               chrX:7054134-7053677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               300
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               41, 155
               

               Conread position:
               9-460
               

               Cow position:
               chrX:10831914-10831430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               9-461
               

               Cow position:
               chrX:13868295-13868763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               328
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               10-160
               

               Cow position:
               chrX:35847814-35847972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               10-271
               

               Cow position:
               chrX:9593536-9593276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 159
               

               Conread position:
               10-436
               

               Cow position:
               chrX:47379868-47379431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               302
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               47, 159
               

               Conread position:
               10-464
               

               Cow position:
               chrX:19196919-19196450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               305
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               48, 159
               

               Conread position:
               10-477
               

               Cow position:
               chrX:21063896-21064362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               317
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               101, 59
               

               Conread position:
               10-499
               

               Cow position:
               chrX:9252572-9252058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               358
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               11-174
               

               Cow position:
               chrX:17010702-17010532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               14-282
               

               Cow position:
               chrX:23024306-23024572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 156
               

               Conread position:
               17-249
               

               Cow position:
               chrX:24441640-24441409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 151
               

               Conread position:
               17-271
               

               Cow position:
               chrX:32584205-32583954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 151
               

               Conread position:
               18-343
               

               Cow position:
               chrX:32978650-32978315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 166
               

               Conread position:
               19-498
               

               Cow position:
               chrX:7695372-7695853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 103
               

               Conread position:
               20-460
               

               Cow position:
               chrX:42247566-42247122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 137
               

               Conread position:
               38-455
               

               Cow position:
               chrX:16722172-16721751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 129
               

               Conread position:
               38-498
               

               Cow position:
               chrX:31436116-31436578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 7
               

               Conread position:
               40-282
               

               Cow position:
               chrX:48310740-48310497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               121, 62
               

               Conread position:
               40-379
               

               Cow position:
               chrX:3396134-3395787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               43-498
               

               Cow position:
               chrX:26626045-26625567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 117
               

               Conread position:
               48-274
               

               Cow position:
               chrX:37906596-37906826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 111
               

               Conread position:
               48-357
               

               Cow position:
               chrX:22873042-22873354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               158, 128
               

               Conread position:
               48-452
               

               Cow position:
               chrX:48247189-48246795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               48-457
               

               Cow position:
               chrX:39700862-39701282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 211
               

               Conread position:
               48-533
               

               Cow position:
               chrX:3154605-3154107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 131
               

               Conread position:
               50-464
               

               Cow position:
               chrX:11725620-11725195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               159, 112
               

               Conread position:
               50-464
               

               Cow position:
               chrX:20038572-20038151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               51-353
               

               Cow position:
               chrX:26883501-26883179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               104, 210
               

               Conread position:
               51-466
               

               Cow position:
               chrX:25232234-25232659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 119
               

               Conread position:
               51-603
               

               Cow position:
               chrX:31443172-31442606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 71
               

               Conread position:
               52-160
               

               Cow position:
               chrX:24202857-24202965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               52-458
               

               Cow position:
               chrX:35803462-35803882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               283
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               8, 110
               

               Conread position:
               52-494
               

               Cow position:
               chrX:11674707-11675165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 107
               

               Conread position:
               53-453
               

               Cow position:
               chrX:24966919-24967326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               150, 109
               

               Conread position:
               53-460
               

               Cow position:
               chrX:44396670-44397073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               199, 75
               

               Conread position:
               54-271
               

               Cow position:
               chrX:37079890-37079680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 109
               

               Conread position:
               55-183
               

               Cow position:
               chrX:42530832-42530702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               55-183
               

               Cow position:
               chrX:46044671-46044799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               107, 69
               

               Conread position:
               55-268
               

               Cow position:
               chrX:501927-501731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               55-271
               

               Cow position:
               chrX:45089088-45089301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 107
               

               Conread position:
               55-450
               

               Cow position:
               chrX:40452562-40452168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 107
               

               Conread position:
               55-465
               

               Cow position:
               chrX:10306322-10306742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               55-494
               

               Cow position:
               chrX:45200237-45199800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               55-531
               

               Cow position:
               chrX:37489370-37489860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 200
               

               Conread position:
               56-154
               

               Cow position:
               chrX:29875341-29875243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-159
               

               Cow position:
               chrX:17663259-17663156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-159
               

               Cow position:
               chrX:22821666-22821769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-159
               

               Cow position:
               chrX:37955556-37955658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               56-159
               

               Cow position:
               chrX:41083558-41083661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-161
               

               Cow position:
               chrX:11855822-11855927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-163
               

               Cow position:
               chrX:1728915-1728808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-163
               

               Cow position:
               chrX:6262778-6262670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               56-163
               

               Cow position:
               chrX:40788815-40788920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               56-164
               

               Cow position:
               chrX:19127573-19127466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               56-164
               

               Cow position:
               chrX:29602394-29602285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               56-165
               

               Cow position:
               chrX:21666426-21666312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               56-165
               

               Cow position:
               chrX:27070213-27070104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               103, 40
               

               Conread position:
               56-166
               

               Cow position:
               chrX:5640966-5640857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               56-166
               

               Cow position:
               chrX:16078322-16078431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               56-171
               

               Cow position:
               chrX:24826992-24827108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               56-172
               

               Cow position:
               chrX:41167377-41167261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-174
               

               Cow position:
               chrX:7573032-7573149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 50
               

               Conread position:
               56-174
               

               Cow position:
               chrX:37572817-37572934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               56-180
               

               Cow position:
               chrX:41067492-41067615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               56-183
               

               Cow position:
               chrX:1499247-1499373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               56-183
               

               Cow position:
               chrX:4943351-4943223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               56-183
               

               Cow position:
               chrX:7425083-7425211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               56-183
               

               Cow position:
               chrX:10394296-10394424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               56-183
               

               Cow position:
               chrX:16416120-16416255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               56-190
               

               Cow position:
               chrX:19019439-19019305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               56-207
               

               Cow position:
               chrX:32012403-32012253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 139
               

               Conread position:
               56-211
               

               Cow position:
               chrX:22284167-22284317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               148, 99
               

               Conread position:
               56-229
               

               Cow position:
               chrX:27117620-27117781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               56-240
               

               Cow position:
               chrX:40321280-40321458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               153, 105
               

               Conread position:
               56-244
               

               Cow position:
               chrX:47965332-47965152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               148, 105
               

               Conread position:
               56-249
               

               Cow position:
               chrX:9096320-9096504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               56-250
               

               Cow position:
               chrX:14009000-14008814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-251
               

               Cow position:
               chrX:2079589-2079396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               150, 110
               

               Conread position:
               56-251
               

               Cow position:
               chrX:17282336-17282149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               154, 106
               

               Conread position:
               56-269
               

               Cow position:
               chrX:3808059-3808265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-269
               

               Cow position:
               chrX:6277802-6277576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               105, 20
               

               Conread position:
               56-269
               

               Cow position:
               chrX:6654658-6654445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 74
               

               Conread position:
               56-269
               

               Cow position:
               chrX:9403763-9403974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 107
               

               Conread position:
               56-269
               

               Cow position:
               chrX:9538197-9538415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               97, 50
               

               Conread position:
               56-269
               

               Cow position:
               chrX:27240389-27240595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               154, 105
               

               Conread position:
               56-269
               

               Cow position:
               chrX:27450377-27450164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 110
               

               Conread position:
               56-270
               

               Cow position:
               chrX:21795149-21795353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               56-271
               

               Cow position:
               chrX:6659028-6659231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               56-271
               

               Cow position:
               chrX:6828788-6828995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 95
               

               Conread position:
               56-271
               

               Cow position:
               chrX:7742804-7742598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-271
               

               Cow position:
               chrX:12724422-12724648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               120, 101
               

               Conread position:
               56-271
               

               Cow position:
               chrX:17691914-17692119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               148, 20
               

               Conread position:
               56-271
               

               Cow position:
               chrX:29877528-29877322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               147, 94
               

               Conread position:
               56-271
               

               Cow position:
               chrX:30863546-30863340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 94
               

               Conread position:
               56-271
               

               Cow position:
               chrX:30950181-30950387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-271
               

               Cow position:
               chrX:34333547-34333341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-271
               

               Cow position:
               chrX:36820579-36820373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-271
               

               Cow position:
               chrX:39548983-39549189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               146, 105
               

               Conread position:
               56-271
               

               Cow position:
               chrX:39954885-39954679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-271
               

               Cow position:
               chrX:40602617-40602821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               56-282
               

               Cow position:
               chrX:2524077-2523861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               147, 106
               

               Conread position:
               56-282
               

               Cow position:
               chrX:16289909-16289693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               153, 104
               

               Conread position:
               56-282
               

               Cow position:
               chrX:22821067-22821283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               162, 105
               

               Conread position:
               56-282
               

               Cow position:
               chrX:23572147-23571931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               153, 105
               

               Conread position:
               56-282
               

               Cow position:
               chrX:25741461-25741245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               153, 105
               

               Conread position:
               56-282
               

               Cow position:
               chrX:28513725-28513940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               56-282
               

               Cow position:
               chrX:39386612-39386397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               149, 104
               

               Conread position:
               56-282
               

               Cow position:
               chrX:44851744-44851963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               138, 44
               

               Conread position:
               56-282
               

               Cow position:
               chrX:45932657-45932873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               148, 104
               

               Conread position:
               56-285
               

               Cow position:
               chrX:25452203-25452421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               219, 50
               

               Conread position:
               56-295
               

               Cow position:
               chrX:40224590-40224365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               159, 105
               

               Conread position:
               56-315
               

               Cow position:
               chrX:6906164-6905903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               8, 106
               

               Conread position:
               56-315
               

               Cow position:
               chrX:29048686-29048932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               219, 20
               

               Conread position:
               56-315
               

               Cow position:
               chrX:31373231-31373477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               201, 73
               

               Conread position:
               56-317
               

               Cow position:
               chrX:21749805-21749551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               219, 50
               

               Conread position:
               56-322
               

               Cow position:
               chrX:10916407-10916668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               148, 105
               

               Conread position:
               56-325
               

               Cow position:
               chrX:9837773-9838063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               109, 214
               

               Conread position:
               56-325
               

               Cow position:
               chrX:44907969-44908240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               153, 69
               

               Conread position:
               56-327
               

               Cow position:
               chrX:25283487-25283226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               148, 72
               

               Conread position:
               56-327
               

               Cow position:
               chrX:37760520-37760772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               56-336
               

               Cow position:
               chrX:22325729-22326000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               148, 27
               

               Conread position:
               56-340
               

               Cow position:
               chrX:19228421-19228126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               56-342
               

               Cow position:
               chrX:7381977-7382262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               147, 63
               

               Conread position:
               56-345
               

               Cow position:
               chrX:6012452-6012160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               213, 26
               

               Conread position:
               56-357
               

               Cow position:
               chrX:16733092-16732776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               56-358
               

               Cow position:
               chrX:35937416-35937121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               148, 97
               

               Conread position:
               56-363
               

               Cow position:
               chrX:7806031-7806344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               153, 81
               

               Conread position:
               56-392
               

               Cow position:
               chrX:160379-160039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 97
               

               Conread position:
               56-400
               

               Cow position:
               chrX:3653418-3653760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               151, 42
               

               Conread position:
               56-401
               

               Cow position:
               chrX:5127576-5127903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               213, 53
               

               Conread position:
               56-401
               

               Cow position:
               chrX:11806363-11806013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               150, 61
               

               Conread position:
               56-402
               

               Cow position:
               chrX:24424739-24424385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               149, 73
               

               Conread position:
               56-403
               

               Cow position:
               chrX:43075634-43075991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               9, 273
               

               Conread position:
               56-405
               

               Cow position:
               chrX:25848568-25848917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               212, 105
               

               Conread position:
               56-415
               

               Cow position:
               chrX:13058217-13058588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 203
               

               Conread position:
               56-415
               

               Cow position:
               chrX:20653045-20653396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               14, 98
               

               Conread position:
               56-415
               

               Cow position:
               chrX:31571038-31571391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               56-415
               

               Cow position:
               chrX:33827378-33826999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 17
               

               Conread position:
               56-416
               

               Cow position:
               chrX:40648319-40648666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               153, 98
               

               Conread position:
               56-424
               

               Cow position:
               chrX:38667981-38667593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               105, 360
               

               Conread position:
               56-434
               

               Cow position:
               chrX:48165176-48165561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               147, 94
               

               Conread position:
               56-436
               

               Cow position:
               chrX:41198739-41199142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               107, 247
               

               Conread position:
               56-436
               

               Cow position:
               chrX:41743566-41743950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 99
               

               Conread position:
               56-446
               

               Cow position:
               chrX:17271635-17271234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 20
               

               Conread position:
               56-453
               

               Cow position:
               chrX:7509790-7510193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-453
               

               Cow position:
               chrX:11860589-11860185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               276
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               147, 94
               

               Conread position:
               56-453
               

               Cow position:
               chrX:23235483-23235887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-453
               

               Cow position:
               chrX:30538499-30538095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-453
               

               Cow position:
               chrX:30899735-30899330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 106
               

               Conread position:
               56-453
               

               Cow position:
               chrX:34095214-34095618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-453
               

               Cow position:
               chrX:34401651-34402053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 68
               

               Conread position:
               56-453
               

               Cow position:
               chrX:37497794-37497390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               147, 94
               

               Conread position:
               56-455
               

               Cow position:
               chrX:25946189-25945779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               56-456
               

               Cow position:
               chrX:36240048-36240455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               148, 105
               

               Conread position:
               56-458
               

               Cow position:
               chrX:5739560-5739151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               213, 105
               

               Conread position:
               56-458
               

               Cow position:
               chrX:9128709-9129118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-458
               

               Cow position:
               chrX:11981774-11982196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               106, 203
               

               Conread position:
               56-458
               

               Cow position:
               chrX:20617144-20616735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               147, 94
               

               Conread position:
               56-458
               

               Cow position:
               chrX:39731166-39731575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-458
               

               Cow position:
               chrX:43767884-43767475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               147, 104
               

               Conread position:
               56-458
               

               Cow position:
               chrX:43979271-43979681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-458
               

               Cow position:
               chrX:44557732-44558141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-459
               

               Cow position:
               chrX:2945216-2944805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 99
               

               Conread position:
               56-459
               

               Cow position:
               chrX:19290425-19290821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               213, 105
               

               Conread position:
               56-460
               

               Cow position:
               chrX:11844585-11844181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               287
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               206, 97
               

               Conread position:
               56-460
               

               Cow position:
               chrX:42507991-42507588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               288
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               147, 97
               

               Conread position:
               56-461
               

               Cow position:
               chrX:7178565-7178957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               271
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               219, 99
               

               Conread position:
               56-461
               

               Cow position:
               chrX:9227331-9226913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 105
               

               Conread position:
               56-461
               

               Cow position:
               chrX:20697950-20697548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               153, 101
               

               Conread position:
               56-461
               

               Cow position:
               chrX:25035733-25035321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               203, 92
               

               Conread position:
               56-461
               

               Cow position:
               chrX:35633100-35632693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               150, 118
               

               Conread position:
               56-461
               

               Cow position:
               chrX:46771319-46770902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               150, 105
               

               Conread position:
               56-463
               

               Cow position:
               chrX:34663207-34662783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 142
               

               Conread position:
               56-464
               

               Cow position:
               chrX:14846421-14846006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-464
               

               Cow position:
               chrX:20945221-20945629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               162, 105
               

               Conread position:
               56-464
               

               Cow position:
               chrX:32188706-32188296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               274
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               150, 105
               

               Conread position:
               56-464
               

               Cow position:
               chrX:39071336-39071758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               289
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               99, 306
               

               Conread position:
               56-464
               

               Cow position:
               chrX:44980384-44979962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               148, 105
               

               Conread position:
               56-464
               

               Cow position:
               chrX:47343945-47344360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               59, 108
               

               Conread position:
               56-464
               

               Cow position:
               chrX:47967253-47967671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               284
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               222, 118
               

               Conread position:
               56-465
               

               Cow position:
               chrX:33855587-33855150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               305
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               149, 61
               

               Conread position:
               56-474
               

               Cow position:
               chrX:18293587-18293996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               43, 84
               

               Conread position:
               56-474
               

               Cow position:
               chrX:32171229-32170811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               295
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-479
               

               Cow position:
               chrX:151551-151984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               297
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               11, 109
               

               Conread position:
               56-490
               

               Cow position:
               chrX:2146971-2147438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               317
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               107, 99
               

               Conread position:
               56-490
               

               Cow position:
               chrX:31250045-31250484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               303
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               56-492
               

               Cow position:
               chrX:37843373-37843815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 105
               

               Conread position:
               56-497
               

               Cow position:
               chrX:2764490-2764964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               324
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               56-498
               

               Cow position:
               chrX:11655731-11656185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               320
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               34, 107
               

               Conread position:
               56-498
               

               Cow position:
               chrX:18695268-18694827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 105
               

               Conread position:
               56-498
               

               Cow position:
               chrX:19689868-19690319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               298
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               219, 45
               

               Conread position:
               56-498
               

               Cow position:
               chrX:22115629-22115213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               307
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               147, 105
               

               Conread position:
               56-498
               

               Cow position:
               chrX:34502576-34503024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               315
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               216, 116
               

               Conread position:
               56-498
               

               Cow position:
               chrX:38227437-38227005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               313
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               214, 105
               

               Conread position:
               56-498
               

               Cow position:
               chrX:38936352-38936804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 106
               

               Conread position:
               56-498
               

               Cow position:
               chrX:42492877-42492419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 147
               

               Conread position:
               56-499
               

               Cow position:
               chrX:38218371-38218819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               316
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               213, 104
               

               Conread position:
               56-502
               

               Cow position:
               chrX:1514774-1514311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 220
               

               Conread position:
               56-509
               

               Cow position:
               chrX:30338266-30337843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               303
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               55, 45
               

               Conread position:
               56-529
               

               Cow position:
               chrX:11561796-11562286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 89
               

               Conread position:
               56-529
               

               Cow position:
               chrX:25419507-25419014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 102
               

               Conread position:
               56-533
               

               Cow position:
               chrX:29032039-29032552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 90
               

               Conread position:
               56-559
               

               Cow position:
               chrX:28787024-28787514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 27
               

               Conread position:
               56-563
               

               Cow position:
               chrX:2300584-2301098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 98
               

               Conread position:
               56-568
               

               Cow position:
               chrX:17631177-17630622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               558
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 214
               

               Conread position:
               56-578
               

               Cow position:
               chrX:11718125-11717591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 19
               

               Conread position:
               56-581
               

               Cow position:
               chrX:126444-126968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               554
               

               Alignm identity:
               366
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               148, 97
               

               Conread position:
               56-587
               

               Cow position:
               chrX:40693107-40692554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 206
               

               Conread position:
               56-593
               

               Cow position:
               chrX:14974075-14973533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               563
               

               Alignm identity:
               367
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               178, 87
               

               Conread position:
               56-593
               

               Cow position:
               chrX:33803362-33802804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 59
               

               Conread position:
               56-597
               

               Cow position:
               chrX:1978149-1978714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 37
               

               Conread position:
               56-597
               

               Cow position:
               chrX:48248474-48249028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               374
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               16, 107
               

               Conread position:
               56-598
               

               Cow position:
               chrX:917717-917170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 106
               

               Conread position:
               56-598
               

               Cow position:
               chrX:3161363-3160840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 105
               

               Conread position:
               56-598
               

               Cow position:
               chrX:15049125-15049692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 208
               

               Conread position:
               56-598
               

               Cow position:
               chrX:23414729-23414167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 170
               

               Conread position:
               56-601
               

               Cow position:
               chrX:10301998-10302549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 20
               

               Conread position:
               56-601
               

               Cow position:
               chrX:37072059-37072618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               370
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               201, 106
               

               Conread position:
               56-602
               

               Cow position:
               chrX:11614374-11614908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 104
               

               Conread position:
               56-602
               

               Cow position:
               chrX:27288089-27287525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 209
               

               Conread position:
               56-603
               

               Cow position:
               chrX:13177804-13177250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               375
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               154, 71
               

               Conread position:
               56-606
               

               Cow position:
               chrX:41733540-41732986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 110
               

               Conread position:
               56-608
               

               Cow position:
               chrX:32309754-32310322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 104
               

               Conread position:
               56-608
               

               Cow position:
               chrX:36010239-36009698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 105
               

               Conread position:
               56-609
               

               Cow position:
               chrX:2786893-2786345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 106
               

               Conread position:
               57-250
               

               Cow position:
               chrX:32747312-32747499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               147, 104
               

               Conread position:
               57-250
               

               Cow position:
               chrX:37205373-37205568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               144, 181
               

               Conread position:
               57-271
               

               Cow position:
               chrX:5112904-5112697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 106
               

               Conread position:
               57-392
               

               Cow position:
               chrX:25966711-25967028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               230, 96
               

               Conread position:
               57-403
               

               Cow position:
               chrX:43648090-43647743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               152, 103
               

               Conread position:
               57-458
               

               Cow position:
               chrX:45263416-45263007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 106
               

               Conread position:
               57-464
               

               Cow position:
               chrX:20029900-20030318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               6, 105
               

               Conread position:
               57-569
               

               Cow position:
               chrX:47743732-47744267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               361
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               152, 16
               

               Conread position:
               58-257
               

               Cow position:
               chrX:19437432-19437236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               58-328
               

               Cow position:
               chrX:34009405-34009675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               148, 100
               

               Conread position:
               58-459
               

               Cow position:
               chrX:18999553-18999953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               279
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               217, 100
               

               Conread position:
               58-463
               

               Cow position:
               chrX:7718511-7718912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 95
               

               Conread position:
               59-271
               

               Cow position:
               chrX:24758041-24757838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               144, 102
               

               Conread position:
               59-273
               

               Cow position:
               chrX:16783148-16783352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 104
               

               Conread position:
               59-396
               

               Cow position:
               chrX:41403617-41403974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               101, 349
               

               Conread position:
               59-396
               

               Cow position:
               chrX:41410165-41410522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               101, 349
               

               Conread position:
               59-453
               

               Cow position:
               chrX:36479588-36479989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               144, 102
               

               Conread position:
               61-271
               

               Cow position:
               chrX:25205368-25205577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               143, 100
               

               Conread position:
               61-460
               

               Cow position:
               chrX:40558018-40557619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               282
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               143, 100
               

               Conread position:
               63-250
               

               Cow position:
               chrX:26754125-26753946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               140, 99
               

               Conread position:
               63-453
               

               Cow position:
               chrX:48227958-48227572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 102
               

               Conread position:
               63-466
               

               Cow position:
               chrX:36778065-36778474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               87, 100
               

               Conread position:
               64-274
               

               Cow position:
               chrX:40365134-40364931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               145, 61
               

               Conread position:
               65-385
               

               Cow position:
               chrX:34454336-34454651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               138, 45
               

               Conread position:
               65-461
               

               Cow position:
               chrX:43527164-43527569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               12, 97
               

               Conread position:
               66-452
               

               Cow position:
               chrX:48328724-48328331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               137, 95
               

               Conread position:
               66-464
               

               Cow position:
               chrX:13196308-13195903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               137, 95
               

               Conread position:
               68-282
               

               Cow position:
               chrX:27458920-27459125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               141, 93
               

               Conread position:
               69-607
               

               Cow position:
               chrX:7645924-7646476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 94
               

               Conread position:
               72-274
               

               Cow position:
               chrX:8103424-8103231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               131, 89
               

               Conread position:
               73-252
               

               Cow position:
               chrX:29055662-29055844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               73-461
               

               Cow position:
               chrX:33639635-33640036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               74-600
               

               Cow position:
               chrX:20376640-20377174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               77-601
               

               Cow position:
               chrX:5638494-5637947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 69
               

               Conread position:
               78-250
               

               Cow position:
               chrX:32214796-32214632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               126, 83
               

               Conread position:
               78-269
               

               Cow position:
               chrX:3207887-3207705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               78-384
               

               Cow position:
               chrX:15545572-15545877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               174, 83
               

               Conread position:
               78-423
               

               Cow position:
               chrX:15008757-15008407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               125, 72
               

               Conread position:
               78-458
               

               Cow position:
               chrX:29356262-29356649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               125, 83
               

               Conread position:
               78-460
               

               Cow position:
               chrX:29844801-29844412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 72
               

               Conread position:
               78-463
               

               Cow position:
               chrX:26492677-26493069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               131, 84
               

               Conread position:
               78-465
               

               Cow position:
               chrX:7508802-7509209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               78-560
               

               Cow position:
               chrX:38007093-38006601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               335
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               126, 83
               

               Conread position:
               79-159
               

               Cow position:
               chrX:6642613-6642693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               73
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-285
               

               Cow position:
               chrX:33205316-33205118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               125, 82
               

               Conread position:
               80-597
               

               Cow position:
               chrX:25713486-25714003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               547
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 44
               

               Conread position:
               81-434
               

               Cow position:
               chrX:27469976-27469616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               122, 80
               

               Conread position:
               81-477
               

               Cow position:
               chrX:36311277-36311649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               129, 81
               

               Conread position:
               81-498
               

               Cow position:
               chrX:9161266-9161679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 80
               

               Conread position:
               83-271
               

               Cow position:
               chrX:45420995-45420814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               123, 78
               

               Conread position:
               83-445
               

               Cow position:
               chrX:28157167-28157543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               126, 17
               

               Conread position:
               84-453
               

               Cow position:
               chrX:3658373-3657997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               119, 77
               

               Conread position:
               85-293
               

               Cow position:
               chrX:46698389-46698166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 182
               

               Conread position:
               87-455
               

               Cow position:
               chrX:28845528-28845888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 75
               

               Conread position:
               87-517
               

               Cow position:
               chrX:13323335-13322862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 185
               

               Conread position:
               88-530
               

               Cow position:
               chrX:23514354-23513880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 153
               

               Conread position:
               91-335
               

               Cow position:
               chrX:45465922-45466173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               97, 70
               

               Conread position:
               92-453
               

               Cow position:
               chrX:12032660-12033028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               111, 69
               

               Conread position:
               93-460
               

               Cow position:
               chrX:19188626-19188991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               112, 68
               

               Conread position:
               94-337
               

               Cow position:
               chrX:25618227-25617974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               110, 67
               

               Conread position:
               94-361
               

               Cow position:
               chrX:23061145-23061409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               165, 68
               

               Conread position:
               94-423
               

               Cow position:
               chrX:14924691-14925024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               109, 67
               

               Conread position:
               95-460
               

               Cow position:
               chrX:20709767-20710134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               114, 60
               

               Conread position:
               97-471
               

               Cow position:
               chrX:33466311-33466680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               97-498
               

               Cow position:
               chrX:11314084-11313681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 63
               

               Conread position:
               100-591
               

               Cow position:
               chrX:5047200-5046712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               345
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               104, 62
               

               Conread position:
               101-460
               

               Cow position:
               chrX:45414602-45414244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               102, 60
               

               Conread position:
               103-386
               

               Cow position:
               chrX:33020186-33020471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               166, 59
               

               Conread position:
               109-349
               

               Cow position:
               chrX:6607115-6607366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               110-363
               

               Cow position:
               chrX:25237885-25238139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               163, 52
               

               Conread position:
               110-450
               

               Cow position:
               chrX:19015149-19015487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               99, 52
               

               Conread position:
               110-598
               

               Cow position:
               chrX:41238656-41238133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               355
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               159, 51
               

               Conread position:
               113-597
               

               Cow position:
               chrX:6563206-6563725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 132
               

               Conread position:
               117-461
               

               Cow position:
               chrX:46033004-46032666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               152, 44
               

               Conread position:
               117-503
               

               Cow position:
               chrX:31294826-31294463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               340, 44
               

               Conread position:
               121-466
               

               Cow position:
               chrX:16762490-16762837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               90, 40
               

               Conread position:
               122-428
               

               Cow position:
               chrX:40540435-40540116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 92
               

               Conread position:
               122-452
               

               Cow position:
               chrX:42874697-42875035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               146, 40
               

               Conread position:
               126-598
               

               Cow position:
               chrX:6675202-6674706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 36
               

               Conread position:
               126-603
               

               Cow position:
               chrX:35413353-35413828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 36
               

               Conread position:
               131-422
               

               Cow position:
               chrX:488218-488517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               140, 31
               

               Conread position:
               146-472
               

               Cow position:
               chrX:38840621-38840955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               24, 169
               

               Conread position:
               156-498
               

               Cow position:
               chrX:33493519-33493880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               156-502
               

               Cow position:
               chrX:43567683-43568027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 97
               

               Conread position:
               156-593
               

               Cow position:
               chrX:42011024-42011485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 95
               

               Conread position:
               156-598
               

               Cow position:
               chrX:15305542-15305087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 30
               

               Conread position:
               156-606
               

               Cow position:
               chrX:17662855-17662384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               326
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               157-550
               

               Cow position:
               chrX:2383234-2383624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 94
               

               Conread position:
               159-379
               

               Cow position:
               chrX:25411587-25411821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               94, 50
               

               Conread position:
               159-460
               

               Cow position:
               chrX:27680150-27680458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               114, 50
               

               Conread position:
               159-497
               

               Cow position:
               chrX:27394267-27393923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 93
               

               Conread position:
               160-428
               

               Cow position:
               chrX:47757181-47756900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               49, 95
               

               Conread position:
               162-463
               

               Cow position:
               chrX:619258-618939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               42, 111
               

               Conread position:
               162-603
               

               Cow position:
               chrX:11939175-11938719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               163-552
               

               Cow position:
               chrX:9635430-9635037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               163-558
               

               Cow position:
               chrX:36975699-36976120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               279
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 90
               

               Conread position:
               163-598
               

               Cow position:
               chrX:19878819-19879245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               164-315
               

               Cow position:
               chrX:17122251-17122096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 93
               

               Conread position:
               164-452
               

               Cow position:
               chrX:21672303-21672606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               164-458
               

               Cow position:
               chrX:37138222-37137925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               164-536
               

               Cow position:
               chrX:38549200-38549594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               164-556
               

               Cow position:
               chrX:42499277-42498897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 86
               

               Conread position:
               164-583
               

               Cow position:
               chrX:37119351-37119789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               40, 369
               

               Conread position:
               164-603
               

               Cow position:
               chrX:24132399-24131944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               164-604
               

               Cow position:
               chrX:6203307-6203756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 180
               

               Conread position:
               164-606
               

               Cow position:
               chrX:7425216-7425682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 97
               

               Conread position:
               166-363
               

               Cow position:
               chrX:2206790-2206586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               166-460
               

               Cow position:
               chrX:26876127-26875821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               109, 56
               

               Conread position:
               170-503
               

               Cow position:
               chrX:13382082-13382433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 163
               

               Conread position:
               171-480
               

               Cow position:
               chrX:16416267-16416593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               172-384
               

               Cow position:
               chrX:32020362-32020134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 85
               

               Conread position:
               172-428
               

               Cow position:
               chrX:44053018-44053288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               37, 87
               

               Conread position:
               172-460
               

               Cow position:
               chrX:9416933-9416624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               32, 280
               

               Conread position:
               172-461
               

               Cow position:
               chrX:25816136-25815840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               172-461
               

               Cow position:
               chrX:28878402-28878113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               172-598
               

               Cow position:
               chrX:17541724-17542170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 79
               

               Conread position:
               173-375
               

               Cow position:
               chrX:4942988-4942780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               175-593
               

               Cow position:
               chrX:30421176-30420743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 168
               

               Conread position:
               178-461
               

               Cow position:
               chrX:15814863-15815145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               178-498
               

               Cow position:
               chrX:6690482-6690156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               32, 83
               

               Conread position:
               178-597
               

               Cow position:
               chrX:25571230-25570776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               313
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 84
               

               Conread position:
               179-464
               

               Cow position:
               chrX:17231501-17231799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               25, 219
               

               Conread position:
               179-587
               

               Cow position:
               chrX:20151617-20152066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               179-597
               

               Cow position:
               chrX:9201314-9201771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               307
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               90, 79
               

               Conread position:
               180-444
               

               Cow position:
               chrX:9997565-9997289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 71
               

               Conread position:
               180-460
               

               Cow position:
               chrX:27509252-27508962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               24, 77
               

               Conread position:
               180-559
               

               Cow position:
               chrX:27176552-27176144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               180-593
               

               Cow position:
               chrX:19930424-19930847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 79
               

               Conread position:
               180-603
               

               Cow position:
               chrX:20752031-20752440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               287
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               95, 20
               

               Conread position:
               180-604
               

               Cow position:
               chrX:23497895-23497462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               292
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               180-605
               

               Cow position:
               chrX:18287286-18286868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 9
               

               Conread position:
               181-409
               

               Cow position:
               chrX:2648581-2648341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               87, 77
               

               Conread position:
               181-478
               

               Cow position:
               chrX:14900952-14900651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               82, 144
               

               Conread position:
               181-597
               

               Cow position:
               chrX:18456161-18456608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 79
               

               Conread position:
               181-597
               

               Cow position:
               chrX:32431396-32431827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               184-460
               

               Cow position:
               chrX:35925739-35926017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               87, 28
               

               Conread position:
               184-461
               

               Cow position:
               chrX:12405597-12405320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               184-466
               

               Cow position:
               chrX:41167192-41166896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               89, 75
               

               Conread position:
               184-477
               

               Cow position:
               chrX:13265848-13265546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 68
               

               Conread position:
               184-489
               

               Cow position:
               chrX:17725750-17726070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 25
               

               Conread position:
               184-533
               

               Cow position:
               chrX:17888634-17888279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               25, 65
               

               Conread position:
               184-585
               

               Cow position:
               chrX:29761910-29761488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 25
               

               Conread position:
               184-597
               

               Cow position:
               chrX:42381328-42380884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               25, 270
               

               Conread position:
               184-598
               

               Cow position:
               chrX:21664951-21664516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 38
               

               Conread position:
               184-602
               

               Cow position:
               chrX:11746614-11747043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 67
               

               Conread position:
               184-608
               

               Cow position:
               chrX:40788976-40789424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               186-460
               

               Cow position:
               chrX:7362079-7361805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               189-465
               

               Cow position:
               chrX:22074577-22074865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               189-481
               

               Cow position:
               chrX:10437888-10437587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               189-497
               

               Cow position:
               chrX:4865028-4865336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               189-536
               

               Cow position:
               chrX:6265809-6265452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               189-559
               

               Cow position:
               chrX:17042467-17042852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 72
               

               Conread position:
               189-574
               

               Cow position:
               chrX:630531-630123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               189-586
               

               Cow position:
               chrX:6488363-6488782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 71
               

               Conread position:
               189-591
               

               Cow position:
               chrX:7497022-7497435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               189-598
               

               Cow position:
               chrX:46701042-46700641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               82, 69
               

               Conread position:
               189-601
               

               Cow position:
               chrX:6041418-6041002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 69
               

               Conread position:
               189-601
               

               Cow position:
               chrX:41083702-41084128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               189-608
               

               Cow position:
               chrX:11856206-11856641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               190-455
               

               Cow position:
               chrX:16790059-16789803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               85, 61
               

               Conread position:
               190-598
               

               Cow position:
               chrX:20792040-20791611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               191-603
               

               Cow position:
               chrX:37574635-37575050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               17, 69
               

               Conread position:
               192-410
               

               Cow position:
               chrX:280914-281132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               192-521
               

               Cow position:
               chrX:9041449-9041112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 133
               

               Conread position:
               192-534
               

               Cow position:
               chrX:23091661-23092006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               192-598
               

               Cow position:
               chrX:46073042-46072601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               298
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 69
               

               Conread position:
               192-601
               

               Cow position:
               chrX:1503119-1503539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               192-608
               

               Cow position:
               chrX:10959623-10959177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 224
               

               Conread position:
               194-598
               

               Cow position:
               chrX:1499451-1499883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               195-603
               

               Cow position:
               chrX:157990-157585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               284
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               78, 14
               

               Conread position:
               197-405
               

               Cow position:
               chrX:29509659-29509433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 55
               

               Conread position:
               197-602
               

               Cow position:
               chrX:29120843-29121254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 12
               

               Conread position:
               197-608
               

               Cow position:
               chrX:41560454-41560057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               198-596
               

               Cow position:
               chrX:28929628-28930042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               282
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               199-541
               

               Cow position:
               chrX:37910239-37910594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               199-574
               

               Cow position:
               chrX:26940705-26940333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 61
               

               Conread position:
               199-603
               

               Cow position:
               chrX:8925493-8925914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               203-497
               

               Cow position:
               chrX:34411631-34411949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 131
               

               Conread position:
               203-527
               

               Cow position:
               chrX:29602039-29601700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               203-591
               

               Cow position:
               chrX:8917645-8918035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               204-602
               

               Cow position:
               chrX:4826035-4825613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               208-433
               

               Cow position:
               chrX:17908487-17908255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               208-533
               

               Cow position:
               chrX:43730418-43730080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               208-581
               

               Cow position:
               chrX:31340501-31340902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 51
               

               Conread position:
               209-443
               

               Cow position:
               chrX:28836103-28835859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               219-608
               

               Cow position:
               chrX:20584141-20584551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               280
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               227-460
               

               Cow position:
               chrX:46146747-46146501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               236-497
               

               Cow position:
               chrX:45633392-45633659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               23, 91
               

               Conread position:
               236-598
               

               Cow position:
               chrX:16514440-16514066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 23
               

               Conread position:
               243-597
               

               Cow position:
               chrX:23666954-23667323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               273-594
               

               Cow position:
               chrX:25388365-25388047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               273-604
               

               Cow position:
               chrX:39415497-39415155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 124
               

               Conread position:
               274-440
               

               Cow position:
               chrX:29055988-29056158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               274-454
               

               Cow position:
               chrX:8913792-8913977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               274-454
               

               Cow position:
               chrX:8915536-8915721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               274-457
               

               Cow position:
               chrX:18417720-18417533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               274-498
               

               Cow position:
               chrX:29680391-29680157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               13, 124
               

               Conread position:
               274-498
               

               Cow position:
               chrX:36355984-36356209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               277-592
               

               Cow position:
               chrX:26493765-26493444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               13, 203
               

               Conread position:
               279-522
               

               Cow position:
               chrX:5679689-5679439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               54, 7
               

               Conread position:
               288-552
               

               Cow position:
               chrX:6656271-6656545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               290-597
               

               Cow position:
               chrX:18142568-18142252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               27, 137
               

               Conread position:
               292-456
               

               Cow position:
               chrX:40642875-40643047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               292-603
               

               Cow position:
               chrX:23940136-23939840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               162, 45
               

               Conread position:
               294-602
               

               Cow position:
               chrX:6632974-6633278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               102, 44
               

               Conread position:
               303-517
               

               Cow position:
               chrX:25441091-25440875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               304-597
               

               Cow position:
               chrX:26619202-26618910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               307-609
               

               Cow position:
               chrX:19678363-19678060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               17, 114
               

               Conread position:
               312-587
               

               Cow position:
               chrX:20882025-20881743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               312-594
               

               Cow position:
               chrX:22326033-22326319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               313-517
               

               Cow position:
               chrX:7344999-7345211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               313-593
               

               Cow position:
               chrX:27771662-27771374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               319-598
               

               Cow position:
               chrX:9539241-9539528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 223
               

               Conread position:
               319-601
               

               Cow position:
               chrX:9839145-9839433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               37, 212
               

               Conread position:
               326-578
               

               Cow position:
               chrX:37760810-37761059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               331-605
               

               Cow position:
               chrX:29874441-29874156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               331-605
               

               Cow position:
               chrX:38999785-39000064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 131
               

               Conread position:
               335-606
               

               Cow position:
               chrX:39339166-39338892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               347-585
               

               Cow position:
               chrX:29408077-29407828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               47, 218
               

               Conread position:
               347-598
               

               Cow position:
               chrX:43426240-43426500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               36, 227
               

               Conread position:
               352-593
               

               Cow position:
               chrX:48089452-48089200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 62
               

               Conread position:
               355-607
               

               Cow position:
               chrX:34356011-34355756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 116
               

               Conread position:
               355-608
               

               Cow position:
               chrX:46083928-46084193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               104, 30
               

               Conread position:
               359-564
               

               Cow position:
               chrX:7806383-7806599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               359-585
               

               Cow position:
               chrX:15233309-15233072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 83
               

               Conread position:
               366-598
               

               Cow position:
               chrX:21640392-21640632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 175
               

               Conread position:
               367-580
               

               Cow position:
               chrX:35759971-35759745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               377-578
               

               Cow position:
               chrX:31602634-31602848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               399-600
               

               Cow position:
               chrX:8780044-8780254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               399-606
               

               Cow position:
               chrX:27276694-27276914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               399-608
               

               Cow position:
               chrX:30980135-30979917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               402-573
               

               Cow position:
               chrX:159753-159575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 85
               

               Conread position:
               418-581
               

               Cow position:
               chrX:12304579-12304752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 139
               

               Conread position:
               427-603
               

               Cow position:
               chrX:29056334-29056502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               435-592
               

               Cow position:
               chrX:16291984-16291815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               435-593
               

               Cow position:
               chrX:39832451-39832616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               442-605
               

               Cow position:
               chrX:17952929-17952760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               449-575
               

               Cow position:
               chrX:46146224-46146090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               451-593
               

               Cow position:
               chrX:488734-488879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 116
               

               Conread position:
               451-602
               

               Cow position:
               chrX:30483954-30483797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 113
               

               Conread position:
               452-591
               

               Cow position:
               chrX:37186218-37186361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               460-608
               

               Cow position:
               chrX:4545288-4545137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               40, 106
               

               Conread position:
               507-609
               

               Cow position:
               chrX:36740631-36740733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-391
Cow position:	chrX:48287841-48287457 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	265
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	279, 49
Conread position:	1-400
Cow position:	chrX:25281900-25281476 (view UCSC Genome Browser custom track)
Alignm length:	427
Alignm identity:	285
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	46, 279
Conread position:	1-436
Cow position:	chrX:12115631-12116083 (view UCSC Genome Browser custom track)
Alignm length:	466
Alignm identity:	311
Alignm E-value:	4e-36
Alignm gaps (pig, cow):	54, 168
Conread position:	1-453
Cow position:	chrX:40827155-40826698 (view UCSC Genome Browser custom track)
Alignm length:	471
Alignm identity:	311
Alignm E-value:	7e-40
Alignm gaps (pig, cow):	55, 165
Conread position:	1-459
Cow position:	chrX:46532930-46532436 (view UCSC Genome Browser custom track)
Alignm length:	497
Alignm identity:	331
Alignm E-value:	8.00001e-42
Alignm gaps (pig, cow):	29, 35
Conread position:	1-464
Cow position:	chrX:1331523-1332003 (view UCSC Genome Browser custom track)
Alignm length:	491
Alignm identity:	319
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	45, 166
Conread position:	1-558
Cow position:	chrX:15147592-15147029 (view UCSC Genome Browser custom track)
Alignm length:	587
Alignm identity:	395
Alignm E-value:	0
Alignm gaps (pig, cow):	6, 102
Conread position:	2-148
Cow position:	chrX:28878664-28878509 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	122
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	53, 0
Conread position:	2-151
Cow position:	chrX:19772028-19771869 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	120
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	43, 0
Conread position:	2-153
Cow position:	chrX:25816664-25816505 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	124
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	56, 0
Conread position:	2-154
Cow position:	chrX:10438060-10437899 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	124
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	45, 0
Conread position:	2-156
Cow position:	chrX:2366958-2367106 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	116
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	48, 0
Conread position:	2-157
Cow position:	chrX:37781490-37781331 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	119
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	45, 0
Conread position:	2-159
Cow position:	chrX:4482542-4482694 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	119
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	40, 0
Conread position:	2-160
Cow position:	chrX:30093773-30093607 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	126
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	53, 0
Conread position:	2-163
Cow position:	chrX:36975435-36975604 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	123
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	56, 0
Conread position:	2-164
Cow position:	chrX:12980756-12980585 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	127
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	53, 0
Conread position:	2-168
Cow position:	chrX:6406936-6407113 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	129
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	53, 0
Conread position:	2-170
Cow position:	chrX:4750782-4750609 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	134
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	53, 112
Conread position:	2-172
Cow position:	chrX:14030609-14030786 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	129
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	28, 167