Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005215_F13.5
        

               Conread position:
               2-98
               

               Cow position:
               chr14:45973302-45973398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-224
               

               Cow position:
               chr14:45979045-45979179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               224-485
               

               Cow position:
               chr14:45980527-45980785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               498-971
               

               Cow position:
               chr14:45982880-45983357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 213
               

               Conread position:
               1015-1172
               

               Cow position:
               chr14:45989524-45989681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               132
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1169-1287
               

               Cow position:
               chr14:45990941-45991059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               113
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1362-1489
               

               Cow position:
               chr14:46001052-46001179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.