Cow genome map
| Conread name: | Ss1.1-Emb1-C0005215_F19.5 |
| Conread position: | 100-366 |
| Cow position: | chr21:39225036-39225304 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 148-362 |
| Cow position: | chr21:17143654-17143437 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 148-366 |
| Cow position: | chr21:20911967-20912181 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 145, 86 |
| Conread position: | 149-363 |
| Cow position: | chr21:4880461-4880674 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 104, 129 |
| Conread position: | 149-363 |
| Cow position: | chr21:38020206-38019986 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 149-363 |
| Cow position: | chr21:44532166-44531954 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 148, 79 |
| Conread position: | 149-366 |
| Cow position: | chr21:2513822-2513603 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 149-397 |
| Cow position: | chr21:34072607-34072858 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 142, 48 |
| Conread position: | 150-363 |
| Cow position: | chr21:27125751-27125966 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 151-352 |
| Cow position: | chr21:44762988-44763191 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 151-363 |
| Cow position: | chr21:47361197-47361410 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 119 |
| Conread position: | 151-366 |
| Cow position: | chr21:5594700-5594481 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 142, 56 |
| Conread position: | 151-366 |
| Cow position: | chr21:7062696-7062913 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 151-366 |
| Cow position: | chr21:22750478-22750695 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 151-366 |
| Cow position: | chr21:33948193-33947977 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 108 |
| Conread position: | 151-397 |
| Cow position: | chr21:13285879-13285639 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 197, 43 |
| Conread position: | 152-255 |
| Cow position: | chr21:31275149-31275049 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 152-348 |
| Cow position: | chr21:26738398-26738589 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 160, 93 |
| Conread position: | 152-363 |
| Cow position: | chr21:46291352-46291139 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 103 |
| Conread position: | 152-366 |
| Cow position: | chr21:219440-219219 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 125 |
| Conread position: | 152-366 |
| Cow position: | chr21:2665171-2665383 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 141, 172 |
| Conread position: | 152-366 |
| Cow position: | chr21:13198403-13198186 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 152-366 |
| Cow position: | chr21:25604483-25604694 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 141, 29 |
| Conread position: | 152-366 |
| Cow position: | chr21:29909350-29909559 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 62, 55 |
| Conread position: | 152-366 |
| Cow position: | chr21:31251970-31251752 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 152-367 |
| Cow position: | chr21:4586730-4586944 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 141, 94 |
| Conread position: | 152-382 |
| Cow position: | chr21:3116501-3116272 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 65 |
| Conread position: | 152-394 |
| Cow position: | chr21:4566960-4566718 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 141, 58 |
| Conread position: | 153-258 |
| Cow position: | chr21:28025894-28025789 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-265 |
| Cow position: | chr21:22463158-22463044 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 153-274 |
| Cow position: | chr21:27262234-27262115 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 153-291 |
| Cow position: | chr21:1686211-1686349 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-294 |
| Cow position: | chr21:37355003-37355144 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-294 |
| Cow position: | chr21:48530145-48530004 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-295 |
| Cow position: | chr21:10570256-10570114 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-312 |
| Cow position: | chr21:27522938-27523093 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 153-312 |
| Cow position: | chr21:49648000-49648157 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 140, 124 |
| Conread position: | 153-313 |
| Cow position: | chr21:11508908-11508747 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-313 |
| Cow position: | chr21:15547939-15548096 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 144, 124 |
| Conread position: | 153-313 |
| Cow position: | chr21:29254227-29254385 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 153-329 |
| Cow position: | chr21:24298234-24298412 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 153-338 |
| Cow position: | chr21:27066630-27066817 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-338 |
| Cow position: | chr21:27286927-27286737 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 153-338 |
| Cow position: | chr21:38026344-38026157 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-339 |
| Cow position: | chr21:33317397-33317585 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-340 |
| Cow position: | chr21:34901863-34902051 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 132, 183 |
| Conread position: | 153-351 |
| Cow position: | chr21:10235012-10235212 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 153-353 |
| Cow position: | chr21:1766557-1766757 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 140, 42 |
| Conread position: | 153-362 |
| Cow position: | chr21:149119-148908 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-362 |
| Cow position: | chr21:1195509-1195298 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-362 |
| Cow position: | chr21:2878856-2879067 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 153-362 |
| Cow position: | chr21:25189613-25189402 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-362 |
| Cow position: | chr21:30564723-30564511 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 153-362 |
| Cow position: | chr21:30596118-30596329 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-362 |
| Cow position: | chr21:33256526-33256315 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-362 |
| Cow position: | chr21:37374196-37373985 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-363 |
| Cow position: | chr21:13299807-13299599 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 133, 78 |
| Conread position: | 153-363 |
| Cow position: | chr21:27429152-27429360 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 33 |
| Conread position: | 153-363 |
| Cow position: | chr21:49297797-49297593 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 134, 99 |
| Conread position: | 153-365 |
| Cow position: | chr21:2419168-2418955 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 140, 49 |
| Conread position: | 153-366 |
| Cow position: | chr21:44672-44471 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 140, 42 |
| Conread position: | 153-366 |
| Cow position: | chr21:166826-166612 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 155 |
| Conread position: | 153-366 |
| Cow position: | chr21:3252622-3252420 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 159, 119 |
| Conread position: | 153-366 |
| Cow position: | chr21:3805890-3805677 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 140, 186 |
| Conread position: | 153-366 |
| Cow position: | chr21:4079014-4078804 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 159, 137 |
| Conread position: | 153-366 |
| Cow position: | chr21:4186918-4186704 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 140, 152 |
| Conread position: | 153-366 |
| Cow position: | chr21:4284617-4284825 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 140, 94 |
| Conread position: | 153-366 |
| Cow position: | chr21:4482268-4482053 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-366 |
| Cow position: | chr21:4717903-4717694 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 140, 114 |
| Conread position: | 153-366 |
| Cow position: | chr21:5020115-5019902 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 140, 157 |
| Conread position: | 153-366 |
| Cow position: | chr21:6966503-6966716 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 140, 63 |
| Conread position: | 153-366 |
| Cow position: | chr21:13112421-13112636 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-366 |
| Cow position: | chr21:21051699-21051485 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 140, 159 |
| Conread position: | 153-366 |
| Cow position: | chr21:24949086-24948864 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-366 |
| Cow position: | chr21:25127067-25126858 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 137, 65 |
| Conread position: | 153-366 |
| Cow position: | chr21:26699695-26699909 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 139, 62 |
| Conread position: | 153-366 |
| Cow position: | chr21:27148582-27148797 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-366 |
| Cow position: | chr21:27620524-27620741 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-366 |
| Cow position: | chr21:28258642-28258427 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 193 |
| Conread position: | 153-366 |
| Cow position: | chr21:28916001-28916216 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 131, 208 |
| Conread position: | 153-366 |
| Cow position: | chr21:33984323-33984533 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 139, 28 |
| Conread position: | 153-366 |
| Cow position: | chr21:34255620-34255837 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-366 |
| Cow position: | chr21:34656926-34656717 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 140, 93 |
| Conread position: | 153-366 |
| Cow position: | chr21:36977943-36978158 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-366 |
| Cow position: | chr21:37123255-37123470 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-366 |
| Cow position: | chr21:39428371-39428157 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 140, 30 |
| Conread position: | 153-366 |
| Cow position: | chr21:40268421-40268627 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 140, 62 |
| Conread position: | 153-366 |
| Cow position: | chr21:42916763-42916548 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-366 |
| Cow position: | chr21:47943921-47943704 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 140, 183 |
| Conread position: | 153-367 |
| Cow position: | chr21:4898993-4899212 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-367 |
| Cow position: | chr21:5010502-5010719 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 153-367 |
| Cow position: | chr21:26400795-26401011 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-367 |
| Cow position: | chr21:41796751-41796967 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 153-367 |
| Cow position: | chr21:47648309-47648093 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 153-380 |
| Cow position: | chr21:30966974-30967201 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 140, 59 |
| Conread position: | 153-388 |
| Cow position: | chr21:22854892-22854660 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 61, 170 |
| Conread position: | 153-391 |
| Cow position: | chr21:24886625-24886385 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 203 |
| Conread position: | 153-396 |
| Cow position: | chr21:33946994-33946750 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 153-397 |
| Cow position: | chr21:470067-469816 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 153-397 |
| Cow position: | chr21:3781746-3781504 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 140, 157 |
| Conread position: | 153-397 |
| Cow position: | chr21:21171338-21171588 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 153-397 |
| Cow position: | chr21:21941581-21941821 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 153-398 |
| Cow position: | chr21:49091483-49091725 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 140, 58 |
| Conread position: | 153-399 |
| Cow position: | chr21:4279646-4279898 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 140, 86 |
| Conread position: | 153-401 |
| Cow position: | chr21:33998551-33998801 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 54 |
| Conread position: | 153-404 |
| Cow position: | chr21:26615950-26616207 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 167, 87 |
| Conread position: | 153-418 |
| Cow position: | chr21:3587099-3587361 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 78 |
| Conread position: | 154-313 |
| Cow position: | chr21:22943784-22943625 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 139, 68 |
| Conread position: | 154-313 |
| Cow position: | chr21:23802699-23802859 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 154-314 |
| Cow position: | chr21:24695664-24695505 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 152, 128 |
| Conread position: | 154-322 |
| Cow position: | chr21:13314423-13314259 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 139, 44 |
| Conread position: | 154-328 |
| Cow position: | chr21:649795-649972 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 154-334 |
| Cow position: | chr21:30555125-30555309 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 154-362 |
| Cow position: | chr21:10853235-10853025 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 154-366 |
| Cow position: | chr21:35390175-35390388 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 151, 130 |
| Conread position: | 155-271 |
| Cow position: | chr21:20578411-20578527 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 155-329 |
| Cow position: | chr21:6864585-6864758 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 157, 46 |
| Conread position: | 155-363 |
| Cow position: | chr21:995471-995675 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 138, 85 |
| Conread position: | 155-393 |
| Cow position: | chr21:37151291-37151057 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 158-313 |
| Cow position: | chr21:30857927-30857770 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 161-366 |
| Cow position: | chr21:8836960-8836759 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 151, 57 |
| Conread position: | 165-329 |
| Cow position: | chr21:30056747-30056913 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 165-349 |
| Cow position: | chr21:23340720-23340906 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 165-365 |
| Cow position: | chr21:9364027-9364224 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 57 |
| Conread position: | 165-366 |
| Cow position: | chr21:2538191-2538394 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 66, 39 |
| Conread position: | 165-366 |
| Cow position: | chr21:3923221-3923018 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 165-366 |
| Cow position: | chr21:15398016-15398219 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 165-366 |
| Cow position: | chr21:19351903-19352106 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 165-366 |
| Cow position: | chr21:32397091-32397294 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 165-366 |
| Cow position: | chr21:47976967-47976764 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 165-367 |
| Cow position: | chr21:6622754-6622564 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 147, 91 |
| Conread position: | 165-374 |
| Cow position: | chr21:11405923-11406134 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 165-397 |
| Cow position: | chr21:1285298-1285534 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 147, 112 |
| Conread position: | 167-366 |
| Cow position: | chr21:42173-41979 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 126, 77 |
| Conread position: | 167-366 |
| Cow position: | chr21:36375945-36375745 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 126, 178 |
| Conread position: | 169-363 |
| Cow position: | chr21:2768886-2769079 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 143, 127 |
| Conread position: | 170-362 |
| Cow position: | chr21:25394050-25394235 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 48 |
| Conread position: | 170-363 |
| Cow position: | chr21:29727137-29726942 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 170-363 |
| Cow position: | chr21:44076236-44076040 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 170-366 |
| Cow position: | chr21:33663242-33663049 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 121, 107 |
| Conread position: | 172-366 |
| Cow position: | chr21:12803119-12803313 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 122, 107 |
| Conread position: | 175-366 |
| Cow position: | chr21:38945729-38945920 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 137, 13 |
| Conread position: | 181-325 |
| Cow position: | chr21:35024322-35024176 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 189-366 |
| Cow position: | chr21:28988061-28987881 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 191-348 |
| Cow position: | chr21:46975140-46975299 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 207-366 |
| Cow position: | chr21:21786586-21786426 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 86, 139 |
| Conread position: | 222-366 |
| Cow position: | chr21:29002423-29002566 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 71, 113 |
Show alignments to all cow chromosomes.