Cow genome map
Conread name: | Ss1.1-Emb1-C0005215_F19.5 |
Conread position: | 146-397 |
Cow position: | chr27:25059941-25059681 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 187 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 145, 95 |
Conread position: | 148-360 |
Cow position: | chr27:29953057-29952849 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 159 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 145, 162 |
Conread position: | 148-363 |
Cow position: | chr27:8726374-8726157 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 145, 0 |
Conread position: | 149-299 |
Cow position: | chr27:2348637-2348487 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 149-360 |
Cow position: | chr27:27236142-27235929 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 157 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 25, 204 |
Conread position: | 149-361 |
Cow position: | chr27:2380382-2380167 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 156 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 149-362 |
Cow position: | chr27:9990414-9990627 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 152 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 164, 148 |
Conread position: | 149-366 |
Cow position: | chr27:23318128-23318346 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 155 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 74, 67 |
Conread position: | 149-366 |
Cow position: | chr27:26552645-26552847 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 165, 59 |
Conread position: | 149-366 |
Cow position: | chr27:30584365-30584582 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 160 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 144, 161 |
Conread position: | 149-367 |
Cow position: | chr27:5991246-5991465 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 153 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 41, 155 |
Conread position: | 149-397 |
Cow position: | chr27:17567894-17567649 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 174 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 60, 49 |
Conread position: | 150-397 |
Cow position: | chr27:27193564-27193815 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 180 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 143, 166 |
Conread position: | 152-299 |
Cow position: | chr27:865398-865251 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 62, 39 |
Conread position: | 152-307 |
Cow position: | chr27:5925051-5924895 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 141, 0 |
Conread position: | 152-352 |
Cow position: | chr27:25971832-25972033 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 149 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 158, 0 |
Conread position: | 152-366 |
Cow position: | chr27:3995105-3995320 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 164 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 160, 0 |
Conread position: | 152-366 |
Cow position: | chr27:26031280-26031493 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 155 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 155, 130 |
Conread position: | 152-369 |
Cow position: | chr27:2897125-2896908 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 167 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 141, 29 |
Conread position: | 152-397 |
Cow position: | chr27:166129-166377 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 174 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 153-275 |
Cow position: | chr27:15874293-15874415 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 153-313 |
Cow position: | chr27:26452635-26452796 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 115 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-325 |
Cow position: | chr27:15543805-15543631 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 130 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-332 |
Cow position: | chr27:5989521-5989700 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 139 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 141, 27 |
Conread position: | 153-339 |
Cow position: | chr27:10378977-10378789 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 133 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 153-352 |
Cow position: | chr27:30750573-30750770 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 137 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 159, 124 |
Conread position: | 153-361 |
Cow position: | chr27:12749823-12749613 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 155 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-362 |
Cow position: | chr27:4982162-4981951 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 146 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-362 |
Cow position: | chr27:9332537-9332326 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 149 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-362 |
Cow position: | chr27:13900684-13900476 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 150 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 140, 59 |
Conread position: | 153-362 |
Cow position: | chr27:15034302-15034513 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 154 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-362 |
Cow position: | chr27:15634542-15634753 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 148 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 153-362 |
Cow position: | chr27:19523922-19524133 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 154 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 140, 170 |
Conread position: | 153-362 |
Cow position: | chr27:20810204-20809993 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 153 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-364 |
Cow position: | chr27:13170369-13170156 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 154 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 159, 0 |
Conread position: | 153-366 |
Cow position: | chr27:1031632-1031417 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 159 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-366 |
Cow position: | chr27:1535974-1535760 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 154 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 159, 0 |
Conread position: | 153-366 |
Cow position: | chr27:3991796-3991589 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 148 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 157, 20 |
Conread position: | 153-366 |
Cow position: | chr27:5913731-5913517 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 148 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 140, 199 |
Conread position: | 153-366 |
Cow position: | chr27:5984241-5984455 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 154 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 140, 191 |
Conread position: | 153-366 |
Cow position: | chr27:8261445-8261235 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 144 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 138, 124 |
Conread position: | 153-366 |
Cow position: | chr27:11488802-11488591 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 167 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 140, 78 |
Conread position: | 153-366 |
Cow position: | chr27:12146853-12147068 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 154 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-366 |
Cow position: | chr27:14297006-14296801 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 154 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 159, 124 |
Conread position: | 153-366 |
Cow position: | chr27:15273283-15273498 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 153 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 153-366 |
Cow position: | chr27:16788667-16788871 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 154 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 140, 115 |
Conread position: | 153-366 |
Cow position: | chr27:20761472-20761261 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 148 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 144, 55 |
Conread position: | 153-366 |
Cow position: | chr27:21451233-21451018 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 162 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 42, 67 |
Conread position: | 153-366 |
Cow position: | chr27:22723148-22722933 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 160 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 140, 195 |
Conread position: | 153-366 |
Cow position: | chr27:25965166-25965372 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 147 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 66, 125 |
Conread position: | 153-366 |
Cow position: | chr27:26599719-26599503 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 156 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-366 |
Cow position: | chr27:26855853-26855638 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 162 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 96, 100 |
Conread position: | 153-366 |
Cow position: | chr27:27665791-27665581 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 152 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 140, 99 |
Conread position: | 153-366 |
Cow position: | chr27:28685912-28686122 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 151 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 140, 120 |
Conread position: | 153-366 |
Cow position: | chr27:28923803-28923582 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 159 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 153-366 |
Cow position: | chr27:29036580-29036795 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 157 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-366 |
Cow position: | chr27:29859265-29859053 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 148 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 140, 124 |
Conread position: | 153-366 |
Cow position: | chr27:31268019-31267810 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 154 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 140, 72 |
Conread position: | 153-367 |
Cow position: | chr27:8200597-8200381 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 153 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 153-367 |
Cow position: | chr27:26327851-26327636 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 157 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 171, 162 |
Conread position: | 153-396 |
Cow position: | chr27:9255344-9255592 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 177 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 104, 78 |
Conread position: | 153-397 |
Cow position: | chr27:3232741-3232985 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 165 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 140, 183 |
Conread position: | 153-402 |
Cow position: | chr27:6017432-6017183 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 27 |
Conread position: | 154-313 |
Cow position: | chr27:27291184-27291024 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 154-337 |
Cow position: | chr27:15405439-15405256 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 149 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 138, 80 |
Conread position: | 154-338 |
Cow position: | chr27:25801416-25801602 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 133 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 154-358 |
Cow position: | chr27:15374622-15374414 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 154-366 |
Cow position: | chr27:25785825-25786035 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 77 |
Conread position: | 154-366 |
Cow position: | chr27:28294073-28294286 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 155 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 139, 89 |
Conread position: | 155-366 |
Cow position: | chr27:8591856-8591645 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 171 |
Conread position: | 155-397 |
Cow position: | chr27:21284408-21284659 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 192 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 30, 15 |
Conread position: | 165-294 |
Cow position: | chr27:22648128-22648257 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 98 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 165-313 |
Cow position: | chr27:10578705-10578557 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 128, 67 |
Conread position: | 165-353 |
Cow position: | chr27:22742628-22742813 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 143 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 128, 153 |
Conread position: | 165-366 |
Cow position: | chr27:1520458-1520256 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 146 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 128, 74 |
Conread position: | 165-366 |
Cow position: | chr27:8960251-8960454 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 149 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 165-366 |
Cow position: | chr27:13353075-13352872 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 149 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 106, 153 |
Conread position: | 165-366 |
Cow position: | chr27:16031619-16031822 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 151 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 165-366 |
Cow position: | chr27:17404084-17404287 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 149 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 165-366 |
Cow position: | chr27:18697119-18696916 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 146 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 165-366 |
Cow position: | chr27:26621473-26621671 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 142 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 128, 63 |
Conread position: | 171-359 |
Cow position: | chr27:26657152-26657339 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 140 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 27, 49 |
Conread position: | 173-370 |
Cow position: | chr27:10260131-10260330 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 145 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 177-366 |
Cow position: | chr27:28042687-28042878 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 178-367 |
Cow position: | chr27:24296476-24296667 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 131 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 181-366 |
Cow position: | chr27:27278478-27278290 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 133 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 183-417 |
Cow position: | chr27:1498811-1498576 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 103 |
Conread position: | 216-363 |
Cow position: | chr27:15858683-15858533 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 121 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.