Cow genome map

Conread name: Ss1.1-Emb1-C0005215_F19.5

Conread position: 30-153
Cow position: chrX:29285019-29285140 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 93-366
Cow position: chrX:12651828-12652103 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 192, 0

Conread position: 147-366
Cow position: chrX:19621969-19621750 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 144, 87

Conread position: 148-313
Cow position: chrX:14459798-14459964 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 145, 0

Conread position: 148-352
Cow position: chrX:15992918-15992716 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 145, 64

Conread position: 148-366
Cow position: chrX:8513902-8513682 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 142, 0

Conread position: 148-366
Cow position: chrX:9010941-9010721 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 145, 0

Conread position: 148-366
Cow position: chrX:33774018-33774234 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 146, 78

Conread position: 149-299
Cow position: chrX:11951147-11951297 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 144, 120

Conread position: 149-313
Cow position: chrX:26507862-26507698 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 144, 79

Conread position: 149-329
Cow position: chrX:31201447-31201269 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 160, 0

Conread position: 149-339
Cow position: chrX:21750894-21751080 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 166, 138

Conread position: 149-352
Cow position: chrX:36194702-36194497 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 144, 0

Conread position: 149-361
Cow position: chrX:4157462-4157674 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 134

Conread position: 149-362
Cow position: chrX:26756033-26756248 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 144, 0

Conread position: 149-363
Cow position: chrX:23134205-23133989 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 144, 0

Conread position: 149-366
Cow position: chrX:1788166-1787952 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 143, 97

Conread position: 149-366
Cow position: chrX:8482058-8481839 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 0

Conread position: 149-366
Cow position: chrX:9067574-9067360 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 167, 89

Conread position: 149-366
Cow position: chrX:9403090-9403307 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 163, 108

Conread position: 149-366
Cow position: chrX:15621925-15622153 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 144, 0

Conread position: 149-366
Cow position: chrX:21343002-21342793 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 142, 163

Conread position: 149-366
Cow position: chrX:21414201-21413985 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 154

Conread position: 149-366
Cow position: chrX:29941787-29941568 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 144, 0

Conread position: 149-367
Cow position: chrX:27983747-27983965 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 162

Conread position: 149-393
Cow position: chrX:24110000-24110240 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 124

Conread position: 149-408
Cow position: chrX:33829650-33829382 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 144, 21

Conread position: 150-363
Cow position: chrX:10300718-10300937 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 150-366
Cow position: chrX:2487258-2487040 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 0

Conread position: 150-366
Cow position: chrX:24483756-24483969 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 161, 120

Conread position: 150-366
Cow position: chrX:30425847-30425633 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 108

Conread position: 151-364
Cow position: chrX:21646676-21646891 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 142, 0

Conread position: 151-366
Cow position: chrX:11462389-11462606 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 143, 0

Conread position: 151-366
Cow position: chrX:12639674-12639881 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 133, 44

Conread position: 151-366
Cow position: chrX:22331166-22331383 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 142, 0

Conread position: 151-366
Cow position: chrX:24995998-24996214 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 175

Conread position: 151-366
Cow position: chrX:36839320-36839110 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 140, 104

Conread position: 151-397
Cow position: chrX:28606480-28606734 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 146, 71

Conread position: 152-313
Cow position: chrX:16023680-16023520 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 141, 94

Conread position: 152-314
Cow position: chrX:25450938-25450775 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 141, 0

Conread position: 152-352
Cow position: chrX:2879117-2879322 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 141, 82

Conread position: 152-362
Cow position: chrX:16710572-16710362 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 158, 192

Conread position: 152-365
Cow position: chrX:36022755-36022542 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 46

Conread position: 152-366
Cow position: chrX:387740-387526 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 86

Conread position: 152-366
Cow position: chrX:672388-672604 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 141, 0

Conread position: 152-366
Cow position: chrX:2226535-2226320 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 39

Conread position: 152-366
Cow position: chrX:7810354-7810566 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 141, 118

Conread position: 152-366
Cow position: chrX:9836198-9835984 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 69

Conread position: 152-366
Cow position: chrX:24170988-24171198 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 84

Conread position: 152-366
Cow position: chrX:26442644-26442861 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 152-366
Cow position: chrX:30112731-30112522 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 141, 123

Conread position: 152-367
Cow position: chrX:24200605-24200387 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 163

Conread position: 152-397
Cow position: chrX:503275-503523 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 136, 10

Conread position: 153-263
Cow position: chrX:34006625-34006735 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 153-265
Cow position: chrX:16525406-16525295 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 153-275
Cow position: chrX:8640390-8640268 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 153-276
Cow position: chrX:1549568-1549445 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 153-277
Cow position: chrX:41847931-41848056 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 99

Conread position: 153-281
Cow position: chrX:46295717-46295588 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 153-287
Cow position: chrX:18243751-18243882 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 153-291
Cow position: chrX:35938438-35938572 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 153-294
Cow position: chrX:38153105-38153246 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 109

Conread position: 153-295
Cow position: chrX:5354698-5354840 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 153-307
Cow position: chrX:3144406-3144259 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 48

Conread position: 153-307
Cow position: chrX:16360400-16360555 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 153-312
Cow position: chrX:21793193-21793033 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 153-313
Cow position: chrX:15341648-15341493 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 138, 42

Conread position: 153-313
Cow position: chrX:21627824-21627978 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 140, 28

Conread position: 153-313
Cow position: chrX:39561057-39561218 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 140, 0

Conread position: 153-325
Cow position: chrX:13282070-13281895 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 153-325
Cow position: chrX:40694100-40694270 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 141, 100

Conread position: 153-328
Cow position: chrX:37761312-37761136 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 152, 0

Conread position: 153-329
Cow position: chrX:9260952-9260779 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 78

Conread position: 153-329
Cow position: chrX:22492639-22492462 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 171

Conread position: 153-338
Cow position: chrX:16035905-16036093 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 153-339
Cow position: chrX:29791201-29791387 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 140, 104

Conread position: 153-352
Cow position: chrX:6236237-6236446 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 81, 191

Conread position: 153-352
Cow position: chrX:13431331-13431533 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 153-352
Cow position: chrX:23279629-23279429 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 171

Conread position: 153-358
Cow position: chrX:5294740-5294949 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 153-361
Cow position: chrX:30181322-30181532 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 153-362
Cow position: chrX:360131-359911 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 153-362
Cow position: chrX:2480026-2480237 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 153-362
Cow position: chrX:4906394-4906601 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 174, 145

Conread position: 153-362
Cow position: chrX:7552199-7552414 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 153-362
Cow position: chrX:9095245-9095038 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 140, 112

Conread position: 153-362
Cow position: chrX:15122559-15122770 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 140, 0

Conread position: 153-362
Cow position: chrX:23453450-23453660 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 140, 42

Conread position: 153-362
Cow position: chrX:24764774-24764984 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 133, 124

Conread position: 153-362
Cow position: chrX:27317833-27317622 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 0

Conread position: 153-362
Cow position: chrX:27615276-27615064 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 184

Conread position: 153-362
Cow position: chrX:29891709-29891501 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 155

Conread position: 153-362
Cow position: chrX:30229509-30229720 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 153-362
Cow position: chrX:38150202-38149991 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 153-362
Cow position: chrX:41153414-41153203 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 195

Conread position: 153-363
Cow position: chrX:2560345-2560557 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 153-363
Cow position: chrX:12997308-12997518 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 81

Conread position: 153-363
Cow position: chrX:23021916-23021710 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 62

Conread position: 153-363
Cow position: chrX:24322226-24322437 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 140, 194

Conread position: 153-363
Cow position: chrX:26749666-26749873 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 104

Conread position: 153-363
Cow position: chrX:30137253-30137464 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 180

Conread position: 153-363
Cow position: chrX:35887694-35887482 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 153-363
Cow position: chrX:43437301-43437513 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 153-364
Cow position: chrX:18222015-18221803 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 140, 58

Conread position: 153-365
Cow position: chrX:19401594-19401380 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:730959-731171 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 140, 104

Conread position: 153-366
Cow position: chrX:2047688-2047473 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:2382068-2381854 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 199

Conread position: 153-366
Cow position: chrX:2579023-2578809 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 144, 115

Conread position: 153-366
Cow position: chrX:3082541-3082750 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 54

Conread position: 153-366
Cow position: chrX:3360424-3360212 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 38

Conread position: 153-366
Cow position: chrX:3406734-3406948 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 124

Conread position: 153-366
Cow position: chrX:3418614-3418830 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 144, 0

Conread position: 153-366
Cow position: chrX:3465759-3465974 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 180

Conread position: 153-366
Cow position: chrX:5247996-5247781 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 144, 0

Conread position: 153-366
Cow position: chrX:5281180-5281395 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:5321109-5321324 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 132, 157

Conread position: 153-366
Cow position: chrX:5865747-5865532 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:6580537-6580332 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 132, 159

Conread position: 153-366
Cow position: chrX:7120097-7119880 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:12185687-12185472 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 193

Conread position: 153-366
Cow position: chrX:12308160-12308375 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:12312399-12312610 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 8, 104

Conread position: 153-366
Cow position: chrX:12345539-12345326 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 159, 129

Conread position: 153-366
Cow position: chrX:12359493-12359278 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:13071843-13072058 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:13092403-13092618 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:13244261-13244046 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:14125642-14125856 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 159, 0

Conread position: 153-366
Cow position: chrX:14461920-14461706 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 63

Conread position: 153-366
Cow position: chrX:14597459-14597244 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:14782743-14782958 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 138, 0

Conread position: 153-366
Cow position: chrX:15176834-15177046 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 140, 180

Conread position: 153-366
Cow position: chrX:15261013-15261229 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 153-366
Cow position: chrX:16045574-16045359 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:16278261-16278044 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 195

Conread position: 153-366
Cow position: chrX:16781885-16781673 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 80

Conread position: 153-366
Cow position: chrX:17054173-17053958 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:17610846-17611057 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 81

Conread position: 153-366
Cow position: chrX:17664595-17664810 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:18657202-18657417 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:19398380-19398164 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:19474546-19474761 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:19608279-19608064 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:20133551-20133766 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:20357397-20357612 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:20741026-20741240 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 49

Conread position: 153-366
Cow position: chrX:21642800-21643015 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 139, 0

Conread position: 153-366
Cow position: chrX:21767235-21767020 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:22126179-22126386 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 63

Conread position: 153-366
Cow position: chrX:22539432-22539649 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 153-366
Cow position: chrX:22565082-22565297 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:22818677-22818462 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:23395209-23394994 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:23573205-23573418 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 132, 157

Conread position: 153-366
Cow position: chrX:24462835-24463047 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 88

Conread position: 153-366
Cow position: chrX:24468520-24468735 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:24770254-24770467 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 159, 131

Conread position: 153-366
Cow position: chrX:25406148-25406356 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 159, 102

Conread position: 153-366
Cow position: chrX:26231156-26231371 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:26274748-26274533 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:26623200-26623415 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 139, 0

Conread position: 153-366
Cow position: chrX:28587584-28587369 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:28753734-28753949 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:28929057-28929271 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 134, 56

Conread position: 153-366
Cow position: chrX:29758823-29759038 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:29911937-29911722 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 140, 208

Conread position: 153-366
Cow position: chrX:30053866-30054079 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 159, 132

Conread position: 153-366
Cow position: chrX:31728079-31727864 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 139, 193

Conread position: 153-366
Cow position: chrX:31979237-31979446 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 140, 47

Conread position: 153-366
Cow position: chrX:32064565-32064780 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:34008388-34008173 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:35023345-35023133 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 69

Conread position: 153-366
Cow position: chrX:35027910-35027704 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 114

Conread position: 153-366
Cow position: chrX:37814753-37814538 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:38963111-38963326 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 140, 0

Conread position: 153-366
Cow position: chrX:39697371-39697156 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 144, 0

Conread position: 153-367
Cow position: chrX:5360612-5360396 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 144, 206

Conread position: 153-367
Cow position: chrX:15978349-15978565 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 153-367
Cow position: chrX:18951128-18951344 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 0

Conread position: 153-367
Cow position: chrX:27978220-27978435 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 157, 0

Conread position: 153-367
Cow position: chrX:29094712-29094928 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 153-367
Cow position: chrX:29916741-29916956 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 171

Conread position: 153-367
Cow position: chrX:43074506-43074300 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 119, 78

Conread position: 153-368
Cow position: chrX:24412630-24412415 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 140, 163

Conread position: 153-369
Cow position: chrX:5549983-5549765 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 140, 0

Conread position: 153-370
Cow position: chrX:13070133-13070340 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 140, 75

Conread position: 153-391
Cow position: chrX:24175342-24175586 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 205

Conread position: 153-396
Cow position: chrX:26634134-26634384 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 122, 60

Conread position: 153-397
Cow position: chrX:2145564-2145322 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 140, 46

Conread position: 153-397
Cow position: chrX:10755171-10754919 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 16

Conread position: 153-397
Cow position: chrX:29877921-29878176 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 153-397
Cow position: chrX:45417005-45417250 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 159, 78

Conread position: 153-398
Cow position: chrX:41528210-41528458 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 140, 151

Conread position: 153-399
Cow position: chrX:27591418-27591674 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 153-406
Cow position: chrX:4995256-4995007 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 140, 54

Conread position: 154-272
Cow position: chrX:4557939-4557821 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 154-285
Cow position: chrX:21832493-21832362 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 154-294
Cow position: chrX:30166058-30166198 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 154-335
Cow position: chrX:4300339-4300521 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 143, 170

Conread position: 154-352
Cow position: chrX:16804264-16804464 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 154-352
Cow position: chrX:16809211-16809411 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 154-352
Cow position: chrX:20725572-20725375 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 162

Conread position: 154-361
Cow position: chrX:12178394-12178603 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 139, 0

Conread position: 154-362
Cow position: chrX:13406684-13406894 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 154-362
Cow position: chrX:24260769-24260980 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 98, 106

Conread position: 154-363
Cow position: chrX:20363535-20363742 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 139, 77

Conread position: 154-366
Cow position: chrX:7754508-7754294 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 139, 0

Conread position: 154-366
Cow position: chrX:19212692-19212908 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 109

Conread position: 154-366
Cow position: chrX:21389179-21388972 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 143, 114

Conread position: 154-366
Cow position: chrX:21591895-21591680 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 138, 0

Conread position: 154-366
Cow position: chrX:29765615-29765396 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 154-366
Cow position: chrX:30072486-30072270 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 154-366
Cow position: chrX:30090432-30090635 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 29, 124

Conread position: 154-366
Cow position: chrX:33537201-33536986 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 78, 0

Conread position: 154-366
Cow position: chrX:35384240-35384443 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 139, 11

Conread position: 154-366
Cow position: chrX:42732482-42732269 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 19

Conread position: 154-393
Cow position: chrX:42009232-42008984 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 154-398
Cow position: chrX:3397049-3397291 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 69

Conread position: 155-335
Cow position: chrX:11074546-11074729 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 155-362
Cow position: chrX:16702284-16702076 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 155, 0

Conread position: 155-362
Cow position: chrX:21582042-21581834 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 138, 62

Conread position: 155-362
Cow position: chrX:24444469-24444678 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 138, 0

Conread position: 155-363
Cow position: chrX:23236492-23236283 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 138, 194

Conread position: 155-364
Cow position: chrX:4767306-4767087 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 155-365
Cow position: chrX:10867249-10867463 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 102, 0

Conread position: 155-366
Cow position: chrX:22810496-22810283 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 138, 0

Conread position: 155-366
Cow position: chrX:35851436-35851235 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 124

Conread position: 156-325
Cow position: chrX:18246700-18246532 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 156, 12

Conread position: 156-366
Cow position: chrX:47381067-47381278 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 109, 66

Conread position: 157-393
Cow position: chrX:29047037-29046799 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 136, 65

Conread position: 160-366
Cow position: chrX:6855078-6855280 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 145, 117

Conread position: 161-366
Cow position: chrX:31340071-31340276 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 12

Conread position: 163-338
Cow position: chrX:16522954-16522782 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 157, 36

Conread position: 165-325
Cow position: chrX:5426680-5426518 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 165-329
Cow position: chrX:22837572-22837408 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 128, 145

Conread position: 165-329
Cow position: chrX:27595636-27595802 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 0

Conread position: 165-331
Cow position: chrX:4623363-4623531 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 165-348
Cow position: chrX:20800155-20799968 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 128, 0

Conread position: 165-349
Cow position: chrX:28519122-28519309 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 126, 0

Conread position: 165-362
Cow position: chrX:21226071-21225872 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 165-362
Cow position: chrX:35532446-35532251 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 153, 65

Conread position: 165-363
Cow position: chrX:6247611-6247810 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 158

Conread position: 165-363
Cow position: chrX:11146746-11146948 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 128, 0

Conread position: 165-363
Cow position: chrX:18899232-18899429 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 128, 28

Conread position: 165-366
Cow position: chrX:2117799-2118002 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 128, 0

Conread position: 165-366
Cow position: chrX:2813885-2814089 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 165-366
Cow position: chrX:5298650-5298853 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 128, 0

Conread position: 165-366
Cow position: chrX:6196446-6196644 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 128, 38

Conread position: 165-366
Cow position: chrX:9086300-9086102 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 50

Conread position: 165-366
Cow position: chrX:10529194-10529399 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 165-366
Cow position: chrX:11976856-11977058 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 43

Conread position: 165-366
Cow position: chrX:16086216-16086013 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 128, 0

Conread position: 165-366
Cow position: chrX:27423678-27423880 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 128, 168

Conread position: 165-366
Cow position: chrX:29171190-29171393 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 165-366
Cow position: chrX:29908826-29909029 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 165-366
Cow position: chrX:30167490-30167686 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 128, 76

Conread position: 165-366
Cow position: chrX:37851728-37851533 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 128, 26

Conread position: 165-366
Cow position: chrX:39713143-39712941 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 132, 143

Conread position: 165-367
Cow position: chrX:13929143-13929347 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 128, 0

Conread position: 165-397
Cow position: chrX:27645646-27645410 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 166-353
Cow position: chrX:2607010-2606824 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 112

Conread position: 166-366
Cow position: chrX:30164641-30164841 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 127, 29

Conread position: 166-400
Cow position: chrX:33815233-33815470 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 46

Conread position: 167-366
Cow position: chrX:13415838-13416039 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 126, 0

Conread position: 167-366
Cow position: chrX:36690866-36691062 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 126, 149

Conread position: 167-391
Cow position: chrX:1938787-1939008 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 130, 202

Conread position: 168-367
Cow position: chrX:29859854-29860054 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 125, 95

Conread position: 168-397
Cow position: chrX:38589602-38589833 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 153

Conread position: 169-366
Cow position: chrX:17891129-17890931 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 124, 0

Conread position: 170-311
Cow position: chrX:13179273-13179411 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 123, 95

Conread position: 170-362
Cow position: chrX:25052420-25052613 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 142, 0

Conread position: 170-362
Cow position: chrX:40642802-40642608 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 123, 0

Conread position: 170-366
Cow position: chrX:3155931-3156128 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 123, 73

Conread position: 170-366
Cow position: chrX:4479987-4479790 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 112

Conread position: 170-366
Cow position: chrX:32328795-32328602 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 142, 103

Conread position: 171-366
Cow position: chrX:12144683-12144486 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 122, 0

Conread position: 171-366
Cow position: chrX:22611994-22611797 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 45

Conread position: 171-366
Cow position: chrX:30437492-30437295 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 122, 0

Conread position: 171-366
Cow position: chrX:36536145-36536342 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 174-366
Cow position: chrX:12666747-12666941 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 0

Conread position: 174-366
Cow position: chrX:20366590-20366782 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 19

Conread position: 176-350
Cow position: chrX:38229171-38229345 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 121, 92

Conread position: 181-366
Cow position: chrX:25175685-25175498 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 181-393
Cow position: chrX:35286226-35286008 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 182-375
Cow position: chrX:31512315-31512124 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 159
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 111, 153

Conread position: 183-362
Cow position: chrX:21000785-21000605 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 115, 125

Conread position: 184-392
Cow position: chrX:39564725-39564930 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 110, 38

Conread position: 185-366
Cow position: chrX:31495310-31495127 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 185-395
Cow position: chrX:10413393-10413609 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 114

Conread position: 189-366
Cow position: chrX:34093260-34093439 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 190-366
Cow position: chrX:11458243-11458422 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 80, 136

Conread position: 196-366
Cow position: chrX:11743849-11743675 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 196-366
Cow position: chrX:21661501-21661673 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 198-366
Cow position: chrX:24445650-24445820 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 198-366
Cow position: chrX:24731208-24731038 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 201-366
Cow position: chrX:5677563-5677729 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 14, 19

Conread position: 222-366
Cow position: chrX:47394408-47394554 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.