Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005218_C19.5
        

               Conread position:
               1-165
               

               Cow position:
               chr13:8309773-8309936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               145
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               164-264
               

               Cow position:
               chr13:8314011-8314111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               425-613
               

               Cow position:
               chr13:8316928-8317116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               703-846
               

               Cow position:
               chr13:8322547-8322689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               965-1071
               

               Cow position:
               chr13:8328372-8328478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1064-1168
               

               Cow position:
               chr13:8329944-8330048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1168-1506
               

               Cow position:
               chr13:8332550-8332877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 195
               
Show alignments to all cow chromosomes.