Cow genome map
| Conread name: | Ss1.1-Emb1-C0005218_M21.5 |
| Conread position: | 291-602 |
| Cow position: | chr13:48050845-48051168 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 304-601 |
| Cow position: | chr13:5542767-5542449 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 304-816 |
| Cow position: | chr13:19155040-19154513 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 341 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 306-835 |
| Cow position: | chr13:26588036-26587503 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 337 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 308-600 |
| Cow position: | chr13:59654570-59654882 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 308-829 |
| Cow position: | chr13:17049183-17048623 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 308-836 |
| Cow position: | chr13:38625272-38625838 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 275 |
| Conread position: | 308-840 |
| Cow position: | chr13:21587613-21588162 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 315 |
| Conread position: | 308-840 |
| Cow position: | chr13:34094845-34094280 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 368 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 321-581 |
| Cow position: | chr13:49255671-49255942 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 322-577 |
| Cow position: | chr13:11826677-11826415 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 322-835 |
| Cow position: | chr13:22188955-22189514 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 382 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 331-838 |
| Cow position: | chr13:39629945-39629404 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 346 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 38, 339 |
| Conread position: | 474-812 |
| Cow position: | chr13:52859729-52859387 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 135, 67 |
| Conread position: | 476-836 |
| Cow position: | chr13:31657081-31656701 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 477-819 |
| Cow position: | chr13:27407819-27407458 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 357 |
| Conread position: | 481-840 |
| Cow position: | chr13:10392002-10391627 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 54, 140 |
| Conread position: | 490-840 |
| Cow position: | chr13:41566895-41566535 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 125 |
| Conread position: | 534-817 |
| Cow position: | chr13:41398119-41398406 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 28 |
| Conread position: | 534-840 |
| Cow position: | chr13:27204618-27204935 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 602-840 |
| Cow position: | chr13:35695619-35695857 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 87, 65 |
| Conread position: | 605-840 |
| Cow position: | chr13:12877688-12877445 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 24 |
| Conread position: | 647-839 |
| Cow position: | chr13:13289561-13289364 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 162 |
Show alignments to all cow chromosomes.