Cow genome map
| Conread name: | Ss1.1-Emb1-C0005218_M21.5 |
| Conread position: | 304-592 |
| Cow position: | chr19:5643401-5643095 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 304-838 |
| Cow position: | chr19:41214157-41213589 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 379 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 306-602 |
| Cow position: | chr19:47100239-47100559 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 130 |
| Conread position: | 306-840 |
| Cow position: | chr19:9115325-9114758 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 364 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 308-793 |
| Cow position: | chr19:49401370-49401885 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 332 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 308-815 |
| Cow position: | chr19:36037037-36037574 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 354 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 308-838 |
| Cow position: | chr19:19445194-19444650 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 309-836 |
| Cow position: | chr19:37797723-37797185 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 366 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 310-818 |
| Cow position: | chr19:21200644-21201186 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 350 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 63, 207 |
| Conread position: | 311-510 |
| Cow position: | chr19:44609002-44609215 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 332-812 |
| Cow position: | chr19:28979873-28980380 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 334 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 404-835 |
| Cow position: | chr19:14627231-14627665 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 226 |
| Conread position: | 476-794 |
| Cow position: | chr19:52147851-52147525 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 135 |
| Conread position: | 476-805 |
| Cow position: | chr19:39877271-39876929 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 67, 6 |
| Conread position: | 496-838 |
| Cow position: | chr19:28938520-28938162 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 130 |
| Conread position: | 496-840 |
| Cow position: | chr19:38735401-38735771 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 549-840 |
| Cow position: | chr19:17690488-17690788 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 57, 101 |
| Conread position: | 570-840 |
| Cow position: | chr19:18393770-18393488 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 216 |
| Conread position: | 572-829 |
| Cow position: | chr19:6979035-6978777 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 605-838 |
| Cow position: | chr19:47036171-47035934 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 608-840 |
| Cow position: | chr19:35538991-35538756 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 609-840 |
| Cow position: | chr19:17732385-17732618 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 28 |
| Conread position: | 643-837 |
| Cow position: | chr19:7567942-7568140 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 647-838 |
| Cow position: | chr19:26252879-26253074 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 647-838 |
| Cow position: | chr19:28445511-28445311 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 697-840 |
| Cow position: | chr19:42874064-42874208 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.