Cow genome map

Conread name: Ss1.1-Emb1-C0005218_M21.5

Conread position: 304-602
Cow position: chr2:38561120-38561427 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 26

Conread position: 304-750
Cow position: chr2:56463575-56464023 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 298
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 146, 33

Conread position: 304-835
Cow position: chr2:272596-273130 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 362
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 58, 15

Conread position: 306-602
Cow position: chr2:55474430-55474128 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 81, 24

Conread position: 308-601
Cow position: chr2:76815200-76815500 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 65, 22

Conread position: 309-648
Cow position: chr2:56870321-56869950 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 21

Conread position: 309-840
Cow position: chr2:34686025-34685450 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 381
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 21

Conread position: 319-840
Cow position: chr2:23051065-23050524 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 350
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 65

Conread position: 324-602
Cow position: chr2:73464556-73464263 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 194
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 51, 250

Conread position: 325-818
Cow position: chr2:76615338-76615854 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 333
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 103

Conread position: 325-836
Cow position: chr2:64222347-64221789 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 358

Conread position: 331-771
Cow position: chr2:58679607-58679149 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 299
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 13

Conread position: 371-818
Cow position: chr2:19814614-19815077 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 297
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 364

Conread position: 403-602
Cow position: chr2:50407031-50407243 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 403-812
Cow position: chr2:34642607-34643041 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 276
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 258

Conread position: 404-602
Cow position: chr2:77672351-77672141 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 153

Conread position: 404-840
Cow position: chr2:64204104-64204560 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 298
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 194

Conread position: 406-840
Cow position: chr2:2530508-2530034 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 315
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 273

Conread position: 412-602
Cow position: chr2:26909698-26909883 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 414-819
Cow position: chr2:23015299-23014874 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 273
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 242

Conread position: 476-812
Cow position: chr2:10183210-10182860 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 224
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 175

Conread position: 476-812
Cow position: chr2:77281198-77281551 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 230
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 181

Conread position: 476-821
Cow position: chr2:11152961-11152603 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 228
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 172

Conread position: 476-821
Cow position: chr2:63890221-63889860 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 236
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 177

Conread position: 476-837
Cow position: chr2:18152678-18152304 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 244
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 174

Conread position: 476-837
Cow position: chr2:51303896-51303528 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 243
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 10

Conread position: 476-840
Cow position: chr2:24154110-24154491 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 8, 20

Conread position: 478-840
Cow position: chr2:27164278-27163909 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 84

Conread position: 485-794
Cow position: chr2:9911303-9911627 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 213
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 156

Conread position: 489-834
Cow position: chr2:17705823-17706177 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 83

Conread position: 489-840
Cow position: chr2:80439769-80440141 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 166

Conread position: 490-838
Cow position: chr2:73778044-73777691 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 233
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 23

Conread position: 497-837
Cow position: chr2:29188444-29188098 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 109, 37

Conread position: 549-823
Cow position: chr2:76123251-76122973 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 140, 89

Conread position: 614-838
Cow position: chr2:44969666-44969890 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 72, 29

Conread position: 640-837
Cow position: chr2:38494877-38494674 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 646-837
Cow position: chr2:44469167-44468978 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 36

Conread position: 686-840
Cow position: chr2:15256979-15256825 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 118

Conread position: 697-836
Cow position: chr2:59204835-59204974 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 109

Conread position: 697-836
Cow position: chr2:60716264-60716124 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 698-839
Cow position: chr2:55473990-55473848 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.