Cow genome map
| Conread name: | Ss1.1-Emb1-C0005218_M21.5 |
| Conread position: | 146-272 |
| Cow position: | chr21:4407057-4407186 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 304-602 |
| Cow position: | chr21:45456862-45457176 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 304-838 |
| Cow position: | chr21:432026-431456 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 382 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 306-454 |
| Cow position: | chr21:3164954-3165107 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 308-838 |
| Cow position: | chr21:15932836-15933382 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 357 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 67, 110 |
| Conread position: | 308-839 |
| Cow position: | chr21:37613123-37613678 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 309-791 |
| Cow position: | chr21:6172712-6173221 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 313-835 |
| Cow position: | chr21:1760994-1760454 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 364 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 322-617 |
| Cow position: | chr21:17207647-17207959 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 322-788 |
| Cow position: | chr21:20244131-20243638 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 325 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 323-606 |
| Cow position: | chr21:42454558-42454855 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 50 |
| Conread position: | 325-601 |
| Cow position: | chr21:33948778-33949073 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 230 |
| Conread position: | 326-840 |
| Cow position: | chr21:10093280-10093836 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 371 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 453 |
| Conread position: | 469-839 |
| Cow position: | chr21:39494186-39493822 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 476-794 |
| Cow position: | chr21:34900025-34899694 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 124 |
| Conread position: | 476-820 |
| Cow position: | chr21:34684679-34685039 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 174 |
| Conread position: | 485-794 |
| Cow position: | chr21:10436508-10436830 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 163 |
| Conread position: | 633-836 |
| Cow position: | chr21:28500454-28500660 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 647-840 |
| Cow position: | chr21:33653308-33653504 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 150 |
| Conread position: | 697-840 |
| Cow position: | chr21:42455235-42455378 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 52 |
Show alignments to all cow chromosomes.