Cow genome map
| Conread name: | Ss1.1-Emb1-C0005218_M21.5 |
| Conread position: | 7-130 |
| Cow position: | chr22:12428287-12428166 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 133-286 |
| Cow position: | chr22:29886182-29886023 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 272-838 |
| Cow position: | chr22:29885889-29885280 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 406 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 304-750 |
| Cow position: | chr22:13826519-13826029 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 320 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 306-805 |
| Cow position: | chr22:23506879-23507363 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 325 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 32, 123 |
| Conread position: | 308-602 |
| Cow position: | chr22:43303110-43302796 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 309-838 |
| Cow position: | chr22:36156866-36156313 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 349 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 35 |
| Conread position: | 311-840 |
| Cow position: | chr22:37997002-37996458 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 325-837 |
| Cow position: | chr22:11994452-11993938 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 345 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 15, 173 |
| Conread position: | 326-816 |
| Cow position: | chr22:12631532-12631014 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 331 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 377-602 |
| Cow position: | chr22:8267803-8268033 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 389-838 |
| Cow position: | chr22:12428164-12427721 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 165 |
| Conread position: | 404-805 |
| Cow position: | chr22:4076706-4076289 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 220 |
| Conread position: | 404-840 |
| Cow position: | chr22:19942148-19941687 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 264 |
| Conread position: | 410-819 |
| Cow position: | chr22:29955799-29955384 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 169 |
| Conread position: | 476-821 |
| Cow position: | chr22:18807758-18807402 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 174 |
| Conread position: | 485-840 |
| Cow position: | chr22:23951394-23951028 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 487-838 |
| Cow position: | chr22:42723067-42722704 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 175 |
| Conread position: | 488-751 |
| Cow position: | chr22:39923098-39923376 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 160 |
| Conread position: | 493-776 |
| Cow position: | chr22:7803510-7803215 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 154 |
| Conread position: | 496-821 |
| Cow position: | chr22:44496377-44496718 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 158 |
| Conread position: | 605-832 |
| Cow position: | chr22:41306540-41306770 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 605-838 |
| Cow position: | chr22:31154717-31154482 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 80, 32 |
| Conread position: | 668-840 |
| Cow position: | chr22:9143661-9143835 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 697-840 |
| Cow position: | chr22:32120502-32120362 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.