Cow genome map
| Conread name: | Ss1.1-Emb1-C0005218_M21.5 |
| Conread position: | 146-278 |
| Cow position: | chr23:27146300-27146164 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 159-274 |
| Cow position: | chr23:25641779-25641896 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 304-838 |
| Cow position: | chr23:25030883-25030328 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 376 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 308-605 |
| Cow position: | chr23:7257362-7257661 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 308-836 |
| Cow position: | chr23:11764349-11764900 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 358 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 308-840 |
| Cow position: | chr23:22611703-22612226 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 355 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 308-840 |
| Cow position: | chr23:30838281-30837734 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 369 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 309-840 |
| Cow position: | chr23:7180907-7180332 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 384 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 323-656 |
| Cow position: | chr23:31647072-31646741 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 324-759 |
| Cow position: | chr23:11967575-11968025 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 326-840 |
| Cow position: | chr23:13820460-13819910 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 358 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 338-602 |
| Cow position: | chr23:36737132-36736861 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 64 |
| Conread position: | 355-835 |
| Cow position: | chr23:17369245-17369737 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 112, 10 |
| Conread position: | 455-837 |
| Cow position: | chr23:2800644-2800258 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 150 |
| Conread position: | 463-840 |
| Cow position: | chr23:27596127-27595743 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 488-838 |
| Cow position: | chr23:17065142-17064774 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 489-836 |
| Cow position: | chr23:28743190-28743553 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 490-825 |
| Cow position: | chr23:15002686-15003046 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 148 |
| Conread position: | 618-840 |
| Cow position: | chr23:8317095-8317327 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 5 |
| Conread position: | 681-837 |
| Cow position: | chr23:22847512-22847356 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 126 |
Show alignments to all cow chromosomes.