Cow genome map
| Conread name: | Ss1.1-Emb1-C0005218_M21.5 |
| Conread position: | 125-289 |
| Cow position: | chr24:10646774-10646611 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 263-840 |
| Cow position: | chr24:19710953-19711582 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 413 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 43, 75 |
| Conread position: | 283-840 |
| Cow position: | chr24:33031390-33031947 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 374 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 301-602 |
| Cow position: | chr24:10646478-10646154 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 39 |
| Conread position: | 304-799 |
| Cow position: | chr24:6216391-6215870 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 345 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 310-602 |
| Cow position: | chr24:18629883-18630180 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 69 |
| Conread position: | 310-607 |
| Cow position: | chr24:18029399-18029690 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 97 |
| Conread position: | 310-835 |
| Cow position: | chr24:37204873-37204332 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 377 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 317-564 |
| Cow position: | chr24:27587149-27587410 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 324-602 |
| Cow position: | chr24:42944281-42943986 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 329-840 |
| Cow position: | chr24:15344192-15344721 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 340 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 114 |
| Conread position: | 387-840 |
| Cow position: | chr24:16537581-16537104 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 315 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 11, 187 |
| Conread position: | 471-794 |
| Cow position: | chr24:7782568-7782228 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 476-753 |
| Cow position: | chr24:22954123-22954414 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 162 |
| Conread position: | 477-840 |
| Cow position: | chr24:384485-384867 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 477-840 |
| Cow position: | chr24:6203265-6203639 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 478-836 |
| Cow position: | chr24:42916249-42915884 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 605-840 |
| Cow position: | chr24:34482398-34482635 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 28 |
| Conread position: | 706-838 |
| Cow position: | chr24:26901727-26901860 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.