Cow genome map
| Conread name: | Ss1.1-Emb1-C0005218_M21.5 |
| Conread position: | 226-840 |
| Cow position: | chr27:15644692-15645343 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 419 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 280-532 |
| Cow position: | chr27:23660240-23660504 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 283-603 |
| Cow position: | chr27:15814160-15813826 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 170 |
| Conread position: | 308-533 |
| Cow position: | chr27:18418376-18418143 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 131, 22 |
| Conread position: | 308-829 |
| Cow position: | chr27:12555258-12554705 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 308-838 |
| Cow position: | chr27:16117889-16117310 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 393 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 308-840 |
| Cow position: | chr27:16037690-16037132 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 364 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 309-605 |
| Cow position: | chr27:4978882-4979190 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 315-478 |
| Cow position: | chr27:27151949-27152123 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 330-812 |
| Cow position: | chr27:1188960-1189470 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 476-840 |
| Cow position: | chr27:12018854-12018474 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 487-819 |
| Cow position: | chr27:23397352-23397679 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 496-837 |
| Cow position: | chr27:8320031-8320379 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 496-839 |
| Cow position: | chr27:617986-617625 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 328 |
| Conread position: | 544-827 |
| Cow position: | chr27:10270776-10270487 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 64, 102 |
| Conread position: | 644-836 |
| Cow position: | chr27:11752897-11752699 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 168 |
Show alignments to all cow chromosomes.