Cow genome map
| Conread name: | Ss1.1-Emb1-C0005218_M21.5 |
| Conread position: | 279-790 |
| Cow position: | chr28:19388762-19388240 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 352 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 305-481 |
| Cow position: | chr28:31299750-31299935 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 306-836 |
| Cow position: | chr28:33019227-33019763 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 356 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 147, 30 |
| Conread position: | 308-836 |
| Cow position: | chr28:9341339-9340766 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 389 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 310-564 |
| Cow position: | chr28:9862052-9861784 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 310-838 |
| Cow position: | chr28:26796060-26796619 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 362 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 113 |
| Conread position: | 322-777 |
| Cow position: | chr28:1214445-1213972 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 476-794 |
| Cow position: | chr28:10562919-10563251 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 172 |
| Conread position: | 476-821 |
| Cow position: | chr28:34597761-34598124 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 58, 176 |
| Conread position: | 486-812 |
| Cow position: | chr28:16386864-16387193 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 488-840 |
| Cow position: | chr28:8958770-8959138 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 496-840 |
| Cow position: | chr28:24015125-24015485 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 283 |
| Conread position: | 498-840 |
| Cow position: | chr28:30262864-30262510 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 106, 15 |
| Conread position: | 499-822 |
| Cow position: | chr28:7214353-7214016 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 150 |
| Conread position: | 539-818 |
| Cow position: | chr28:7320461-7320179 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 614-836 |
| Cow position: | chr28:22466212-22465986 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 75, 23 |
| Conread position: | 614-836 |
| Cow position: | chr28:26548310-26548542 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 632-837 |
| Cow position: | chr28:17940445-17940239 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 59 |
| Conread position: | 650-824 |
| Cow position: | chr28:32822464-32822287 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 650-836 |
| Cow position: | chr28:28552101-28552291 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 668-838 |
| Cow position: | chr28:3845264-3845438 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 8 |
Show alignments to all cow chromosomes.