Cow genome map

Conread name: Ss1.1-Emb1-C0005218_M21.5

Conread position: 257-506
Cow position: chr3:72535908-72536171 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 208

Conread position: 291-835
Cow position: chr3:38887534-38888092 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 360
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 78

Conread position: 295-602
Cow position: chr3:67534008-67534339 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 304-840
Cow position: chr3:73945536-73944965 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 391
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 26

Conread position: 306-820
Cow position: chr3:60262915-60262426 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 328
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 198, 24

Conread position: 308-602
Cow position: chr3:47715501-47715804 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 80, 29

Conread position: 309-605
Cow position: chr3:55190644-55190339 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 85

Conread position: 321-831
Cow position: chr3:4080787-4080250 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 345
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 54, 127

Conread position: 322-793
Cow position: chr3:11784584-11785091 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 321
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 17

Conread position: 322-838
Cow position: chr3:70520068-70519517 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 351
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 275

Conread position: 325-794
Cow position: chr3:43084462-43084959 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 324
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 129

Conread position: 326-840
Cow position: chr3:27531557-27531022 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 352
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 60, 168

Conread position: 327-602
Cow position: chr3:70200003-70200293 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 329-835
Cow position: chr3:9289833-9290363 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 343
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 325

Conread position: 339-818
Cow position: chr3:16884081-16883584 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 321
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 222

Conread position: 350-840
Cow position: chr3:62246958-62246430 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 335
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 515

Conread position: 387-840
Cow position: chr3:67451480-67451927 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 300
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 49

Conread position: 403-819
Cow position: chr3:73936876-73936436 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 281
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 249

Conread position: 404-823
Cow position: chr3:65204290-65203856 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 286
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 229

Conread position: 404-838
Cow position: chr3:57531443-57531904 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 311
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 225

Conread position: 404-840
Cow position: chr3:66134517-66134048 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 298
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 262

Conread position: 469-829
Cow position: chr3:30003711-30004080 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 17

Conread position: 482-838
Cow position: chr3:16606317-16605965 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 5

Conread position: 486-791
Cow position: chr3:18814916-18815232 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 203
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 159

Conread position: 490-835
Cow position: chr3:37909741-37909377 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 6

Conread position: 492-837
Cow position: chr3:11542768-11543131 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 50, 266

Conread position: 537-839
Cow position: chr3:77370023-77369712 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 197

Conread position: 605-840
Cow position: chr3:58104804-58105045 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 36

Conread position: 650-838
Cow position: chr3:80631600-80631409 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 138

Conread position: 663-840
Cow position: chr3:67534674-67534853 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 166

Conread position: 697-839
Cow position: chr3:39971732-39971590 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 115, 107

Conread position: 697-840
Cow position: chr3:36727671-36727813 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 9

Conread position: 699-840
Cow position: chr3:16719645-16719505 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 86, 0

Show alignments to all cow chromosomes.