Cow genome map
| Conread name: | Ss1.1-End4-UMC-pd12_14end-006-a08.3 |
| Conread position: | 1-380 |
| Cow position: | chr10:8996285-8995911 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 286 |
| Conread position: | 1-394 |
| Cow position: | chr10:8996537-8996140 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 234 |
| Conread position: | 1-394 |
| Cow position: | chr10:8996705-8996308 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 0 |
| Conread position: | 1-394 |
| Cow position: | chr10:9010349-9009952 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 359, 0 |
| Conread position: | 3-277 |
| Cow position: | chr10:9031390-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-395 |
| Cow position: | chr10:21939017-21938626 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 336, 265 |
| Conread position: | 6-234 |
| Cow position: | chr10:9010092-9009864 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-311 |
| Cow position: | chr10:9010176-9009871 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-394 |
| Cow position: | chr10:8996868-8996476 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 0 |
| Conread position: | 7-310 |
| Cow position: | chr10:9031310-9031613 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-358 |
| Cow position: | chr10:8996615-8996264 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-368 |
| Cow position: | chr10:8996363-8996002 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-394 |
| Cow position: | chr10:21939099-21938710 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 351, 373 |
| Conread position: | 7-396 |
| Cow position: | chr10:8996447-8996054 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 144 |
| Conread position: | 7-396 |
| Cow position: | chr10:8996783-8996390 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 337 |
| Conread position: | 7-406 |
| Cow position: | chr10:9010511-9010107 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 77 |
| Conread position: | 13-445 |
| Cow position: | chr10:9031232-9031669 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 0 |
| Conread position: | 18-394 |
| Cow position: | chr10:9010582-9010204 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 228, 15 |
| Conread position: | 23-398 |
| Cow position: | chr10:21939166-21938787 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 129, 5 |
| Conread position: | 23-402 |
| Cow position: | chr10:9010411-9010027 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 335, 0 |
| Conread position: | 24-394 |
| Cow position: | chr10:8996934-8996560 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 333, 0 |
| Conread position: | 44-313 |
| Cow position: | chr10:9031664-9031944 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 47-394 |
| Cow position: | chr10:9031182-9031533 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 310, 0 |
| Conread position: | 136-353 |
| Cow position: | chr10:9031672-9031890 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 141, 0 |
Show alignments to all cow chromosomes.