• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-End4-UMC-pd12_14end-006-a08.3
        

               
Conread position:
               
1-189
               

               
Cow position:
               
chr18:43022171-43021983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr18:44397707-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
157, 161
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr18:41198559-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:43053399-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
160, 150
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:56247257-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
175, 115
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr18:52428785-52429004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
164, 158
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr18:52433966-52434185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
164, 158
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:49032314-49032048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr18:42837372-42837100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
160, 141
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr18:42984744-42984472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr18:44240573-44240845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:43093022-43092751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:44184238-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr18:14453144-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:43174792-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 131
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr18:56128937-56129234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
228, 195
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr18:44253663-44253354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 0
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr18:53635228-53634919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:40086454-40086145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
238, 0
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:42959744-42959433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:51367535-51367224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
244, 234
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:51368038-51367728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
161, 156
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr18:43048668-43048356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 160
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr18:41948784-41948429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr18:42744153-42743798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 234
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr18:1418230-1418587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 177
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr18:40306733-40307090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
239, 249
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr18:49032650-49032293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr18:50058807-50058452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 0
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr18:52448008-52448374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 234
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr18:50030925-50030553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr18:50048827-50048460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr18:50049079-50048712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
159, 153
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr18:50246137-50246504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
335, 319
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr18:56329707-56329340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr18:43168188-43168558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr18:33063954-33063568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
326, 337
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr18:42675429-42675040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
355, 0
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:40324656-40324262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:40324740-40324346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 130
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:50021752-50021357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:43167936-43168331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 141
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:44239733-44240128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:51789665-51789270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 311
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:40086876-40086477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
157, 102
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:40306565-40306962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:40324404-40324007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:41948952-41948555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 245
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:42744573-42744176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 344
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:42837792-42837395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 312
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:43022927-43022530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:43093850-43093465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 98
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:43168020-43168417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 366
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:43174960-43174563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 225
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:43175296-43174899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 343
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:44184910-44184513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 337
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:44240321-44240718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 313
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:44240405-44240802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 0
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:44398379-44397982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 0
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52427777-52428174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
322, 337
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52427861-52428258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 248
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52427945-52428342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 164
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52428113-52428510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 234
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52428365-52428762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
159, 150
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52428449-52428846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52433126-52433523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
232, 244
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52433210-52433607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 160
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52433294-52433691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 234
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52433546-52433943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 0
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52433630-52434027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
359, 0
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52447336-52447733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:52447420-52447817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 326
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:56329287-56328890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
324, 335
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:40086120-40085728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
232, 108
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:41198139-41198538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:42674925-42674526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 160
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:42984996-42984597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:43119927-43119528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:43120263-43119864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 228
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:43175128-43174729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:44397959-44397560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 244
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:51812824-51812425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 0
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:51812992-51812593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
160, 149
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:50099371-50099772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:52447168-52447569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
197, 189
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:52447756-52448158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 0
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr18:50022259-50021853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
76, 91
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:42790856-42791260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
356, 0
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:51400340-51400744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
335, 330
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:44239817-44240221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 161
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr18:51367703-51367297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
152, 160
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr18:51368458-51368050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
161, 153
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:50048995-50048582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 83
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:50059731-50059315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 312
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:51400676-51401090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 0
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr18:51970316-51970724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
356, 55
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr18:42985164-42984744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 141
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr18:44240153-44240573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr18:42744738-42744319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 12
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr18:43175044-43174622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 160
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr18:50271605-50272030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 0
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr18:43022759-43022332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 234
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr18:49023043-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 65
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr18:51400929-51401227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
248, 233
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr18:56247422-56247117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:55008788-55009143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
156, 144
               

               
Conread position:
               
2-358
               

               
Cow position:
               
chr18:49022875-49023231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
258, 253
               

               
Conread position:
               
2-358
               

               
Cow position:
               
chr18:50295249-50295605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 92
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr18:50246222-50246583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
234, 247
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr18:49022707-49023082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr18:52447589-52447982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 0
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr18:54979957-54980350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr18:54993301-54993694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr18:51812907-51812513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr18:53509383-53509777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
234, 248
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr18:53525837-53526231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
232, 248
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr18:51789748-51789350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 339
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr18:50245970-50246374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
317, 0
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr18:52447841-52448247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 336
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr18:42693147-42692941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr18:50271943-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr18:43048582-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr18:53526174-53526404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr18:33092792-33092561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr18:1418316-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr18:42792622-42792919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr18:40075085-40075393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr18:40324234-40323927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
242, 232
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr18:44153651-44153344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
231, 59
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr18:53509720-53510032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
248, 244
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr18:50059225-50058900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:50849153-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr18:42792034-42792387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr18:43093188-43092835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr18:1418064-1418419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 105
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr18:22634702-22635057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr18:42792538-42792893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr18:50031004-50030650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
155, 71
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr18:56434443-56434797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr18:50021918-50021552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
137, 146
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr18:50246475-50246836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr18:55523790-55524151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr18:44184320-44183954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr18:50848817-50849181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr18:53560156-53560520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
327, 333
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr18:50048489-50048125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
240, 154
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr18:33093044-33092652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 336
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr18:51766020-51765628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr18:52447506-52447898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr18:55017774-55018166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr18:56494074-56494466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
120, 112
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr18:51839331-51838937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 338
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr18:33064792-33064397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
141, 171
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr18:42791278-42791673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr18:42792118-42792513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 0
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr18:52427695-52428090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
158, 148
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr18:52433044-52433439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
158, 148
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:14454042-14453645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:41198057-41198454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:42960237-42959840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
248, 232
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:50059057-50058660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 176
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:50271691-50272088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 317
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr18:50083512-50083911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 333
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr18:50295334-50295735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr18:42791614-42792016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 112
               

               
Conread position:
               
3-401
               

               
Cow position:
               
chr18:43093440-43093039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 399
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr18:41197721-41198126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:50848565-50848976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 0
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr18:43093356-43092944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr18:50848397-50848814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 0
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr18:51839499-51839087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
354, 396
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr18:41197637-41198057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 305
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr18:41198225-41198645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr18:42791698-42792118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 127
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr18:42792202-42792622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr18:40086536-40086107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 316
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr18:53560324-53560755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
120, 112
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr18:50295502-50295933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 248
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr18:51367448-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
157, 147
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr18:51812149-51811907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr18:51839078-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr18:51368119-51367812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
241, 232
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr18:50083933-50084265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 0
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr18:50251065-50251422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
237, 82
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr18:50048656-50048297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 83
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr18:50848902-50849266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr18:51751852-51751492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
141, 158
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr18:52012296-52011932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
256, 232
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr18:44153891-44153512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
330, 225
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr18:51752188-51751797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr18:50848986-50849378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
87, 76
               

               
Conread position:
               
4-394
               

               
Cow position:
               
chr18:43167771-43168165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 304
               

               
Conread position:
               
4-394
               

               
Cow position:
               
chr18:51969404-51969796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 205
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr18:44184487-44184090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 239
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr18:42985077-42984678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr18:50099878-50100278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 63
               

               
Conread position:
               
4-404
               

               
Cow position:
               
chr18:51751936-51751529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
225, 236
               

               
Conread position:
               
4-406
               

               
Cow position:
               
chr18:42791363-42791772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
87, 75
               

               
Conread position:
               
4-408
               

               
Cow position:
               
chr18:33064623-33064216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
366, 398
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr18:51969572-51969972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr18:50100131-50100332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr18:42827720-42827953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
188, 193
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr18:56248177-56247912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr18:50100047-50100329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr18:53586263-53585972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
240, 228
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr18:50251231-50251538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr18:40085956-40085647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
153, 158
               

               
Conread position:
               
5-318
               

               
Cow position:
               
chr18:50058887-50058574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr18:41197975-41198326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 173
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr18:43093102-43092753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 269
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr18:50099963-50100314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
152, 137
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr18:50059139-50058786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 259
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr18:53635812-53635459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr18:56128353-56128706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr18:53498540-53498900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
5-368
               

               
Cow position:
               
chr18:50099627-50099990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
253, 238
               

               
Conread position:
               
5-368
               

               
Cow position:
               
chr18:50295420-50295783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
321, 316
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr18:42960151-42959761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 142
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr18:55066794-55066404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
163, 157
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr18:44239989-44240380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
151, 157
               

               
Conread position:
               
5-394
               

               
Cow position:
               
chr18:42959899-42959515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
365, 144
               

               
Conread position:
               
5-394
               

               
Cow position:
               
chr18:43175544-43175151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
160, 142
               

               
Conread position:
               
5-394
               

               
Cow position:
               
chr18:50059475-50059082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 331
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr18:43022839-43022444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 157
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr18:44184654-44184259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 162
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr18:49033318-49032923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr18:50022000-50021602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 69
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr18:50083850-50084245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr18:50099711-50100106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr18:50848735-50849130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 314
               

               
Conread position:
               
5-397
               

               
Cow position:
               
chr18:50022339-50021939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
265, 0
               

               
Conread position:
               
5-397
               

               
Cow position:
               
chr18:50099291-50099688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr18:50246393-50246792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
5-402
               

               
Cow position:
               
chr18:43175208-43174806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 142
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr18:42791532-42791944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 332
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr18:44184822-44184412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 78
               

               
Conread position:
               
5-418
               

               
Cow position:
               
chr18:41949368-41948948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 0
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr18:50059307-50058891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 303
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:42791028-42791451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 421
               

               
Conread position:
               
6-189
               

               
Cow position:
               
chr18:42743980-42743797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 136
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr18:56494329-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
116, 109
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr18:33092705-33092482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr18:51873765-51873993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr18:50849240-50849495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr18:43022250-43021983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-278
               

               
Cow position:
               
chr18:56329114-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-284
               

               
Cow position:
               
chr18:40075424-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
245, 241
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr18:41198480-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr18:50282075-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr18:44397786-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
157, 136
               

               
Conread position:
               
6-291
               

               
Cow position:
               
chr18:42827637-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 276
               

               
Conread position:
               
6-295
               

               
Cow position:
               
chr18:56247336-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr18:43119754-43119454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr18:40086622-40086312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr18:50030750-50030442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr18:50049160-50048853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr18:56494161-56494466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr18:40306318-40306624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr18:41948611-41948306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
302, 285
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr18:41948695-41948389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr18:44153967-44153667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
6-317
               

               
Cow position:
               
chr18:51765765-51765454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:42693563-42693243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
245, 241
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr18:51839160-51838837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr18:56330122-56329794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
314, 0
               

               
Conread position:
               
6-340
               

               
Cow position:
               
chr18:51812231-51811897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 302
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr18:43022334-43021984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr18:44397870-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 141
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr18:51812651-51812301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 339
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr18:53559991-53560341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
156, 162
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr18:56329198-56328848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
86, 81
               

               
Conread position:
               
6-358
               

               
Cow position:
               
chr18:42675172-42674820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 235
               

               
Conread position:
               
6-358
               

               
Cow position:
               
chr18:42827385-42827737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-358
               

               
Cow position:
               
chr18:43167521-43167873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
192, 175
               

               
Conread position:
               
6-358
               

               
Cow position:
               
chr18:44154050-44153705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
326, 69
               

               
Conread position:
               
6-358
               

               
Cow position:
               
chr18:49022963-49023315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-358
               

               
Cow position:
               
chr18:50083683-50084035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 243
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr18:1417815-1418173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
97, 107
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr18:42674752-42674395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr18:40306990-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr18:41198396-41198756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 234
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr18:42693311-42692951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
299, 81
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr18:42693983-42693623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
117, 106
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr18:55523961-55524319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr18:56316282-56316644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
239, 230
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr18:42693731-42693357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
136, 151
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr18:40086365-40085986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
243, 149
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr18:51789156-51788770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 335
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr18:51812399-51812013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 335
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr18:54967268-54967655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr18:40075004-40075393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr18:40075172-40075561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
243, 229
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr18:42674836-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 0
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr18:50099544-50099933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
155, 160
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr18:56493909-56494298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 95
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr18:42837535-42837145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
6-393
               

               
Cow position:
               
chr18:41949199-41948808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:40324567-40324175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:41197808-41198200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 234
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:42744316-42743924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 149
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:42790945-42791337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 136
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:42837871-42837479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 302
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:42959814-42959431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
351, 64
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:42985495-42985103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 229
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:44154302-44153911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
241, 234
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:44184569-44184177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 308
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:44398206-44397814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 229
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:50083767-50084159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 159
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:51367782-51367390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:52447089-52447481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
156, 149
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr18:53560075-53560467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
116, 109
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:40086031-40085644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
149, 16
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:41197556-41197950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:41197892-41198286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 151
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:43120090-43119696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 225
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:44253335-44252942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
304, 218
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:44398038-44397644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:44398122-44397728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 145
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:44398290-44397896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:49022545-49022937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:50099124-50099518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:50250983-50251375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
317, 163
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:51789492-51789098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 254
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:53526093-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:54967184-54967578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:54979541-54979935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
250, 241
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:54979709-54980103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:54992801-54993195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr18:55018029-55018423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
116, 109
               

               
Conread position:
               
6-397
               

               
Cow position:
               
chr18:53636063-53635667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
365, 0
               

               
Conread position:
               
6-397
               

               
Cow position:
               
chr18:56128102-56128498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
365, 0
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr18:43167857-43168254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr18:50049246-50048845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
77, 234
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr18:50848148-50848546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
146, 154
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr18:51752018-51751621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 313
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr18:55008708-55009105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr18:54967016-54967415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
116, 109
               

               
Conread position:
               
6-402
               

               
Cow position:
               
chr18:42675088-42674687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 149
               

               
Conread position:
               
6-403
               

               
Cow position:
               
chr18:41198312-41198714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
6-405
               

               
Cow position:
               
chr18:43023090-43022687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 332
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr18:42675340-42674934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 244
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr18:42791113-42791523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr18:50848484-50848894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
6-414
               

               
Cow position:
               
chr18:51788988-51788578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
357, 302
               

               
Conread position:
               
6-414
               

               
Cow position:
               
chr18:51874205-51874620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
240, 233
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr18:42791449-42791865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
6-416
               

               
Cow position:
               
chr18:42837703-42837286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 313
               

               
Conread position:
               
6-416
               

               
Cow position:
               
chr18:42837955-42837538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
6-416
               

               
Cow position:
               
chr18:42985243-42984826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 147
               

               
Conread position:
               
6-418
               

               
Cow position:
               
chr18:41949283-41948864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
6-418
               

               
Cow position:
               
chr18:43093521-43093102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 302
               

               
Conread position:
               
6-418
               

               
Cow position:
               
chr18:50083431-50083850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
150, 145
               

               
Conread position:
               
6-425
               

               
Cow position:
               
chr18:44253490-44253076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
234, 113
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr18:51969816-51970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-251
               

               
Cow position:
               
chr18:42959654-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
154, 144
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr18:51874458-51874706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr18:50030665-50030388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 148
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr18:51838720-51838443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 73
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr18:50271863-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr18:51874374-51874654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr18:52428707-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
242, 236
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr18:52433888-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
242, 236
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr18:55524046-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
7-309
               

               
Cow position:
               
chr18:55008961-55009263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
7-311
               

               
Cow position:
               
chr18:51765680-51765376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
265, 258
               

               
Conread position:
               
7-311
               

               
Cow position:
               
chr18:53586513-53586209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr18:43022501-43022196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr18:53586345-53586040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr18:53610317-53610012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
247, 229
               

               
Conread position:
               
7-313
               

               
Cow position:
               
chr18:52448098-52448405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 144
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr18:53635474-53635162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-321
               

               
Cow position:
               
chr18:49032392-49032078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-329
               

               
Cow position:
               
chr18:51765596-51765274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
265, 258
               

               
Conread position:
               
7-330
               

               
Cow position:
               
chr18:14453786-14453463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
155, 149
               

               
Conread position:
               
7-344
               

               
Cow position:
               
chr18:53635894-53635557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
253, 248
               

               
Conread position:
               
7-344
               

               
Cow position:
               
chr18:56128271-56128608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
252, 248
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:14453222-14452873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:33064032-33063683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
163, 147
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:40074921-40075270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:42827554-42827903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:42984822-42984473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 140
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:43174870-43174521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 135
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:49033148-49032799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:51789407-51789058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
326, 338
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:52428623-52428972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 144
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:52433804-52434153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 144
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:55018450-55018800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:55066708-55066359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 104
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:50281992-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
138, 145
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:33064116-33063765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:49032980-49032629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:50281740-50282091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
149, 145
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:51765260-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
248, 253
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:52012041-52011690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:53586849-53586498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:53587017-53586666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
154, 147
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:54966933-54967284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:54967938-54968287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:54968188-54968539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:54980298-54980648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:54993222-54993573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
318, 306
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:55018534-55018884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:56329365-56329014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr18:56434111-56434462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
7-363
               

               
Cow position:
               
chr18:50048905-50048549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 100
               

               
Conread position:
               
7-363
               

               
Cow position:
               
chr18:50271527-50271883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
7-364
               

               
Cow position:
               
chr18:50083348-50083705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
7-364
               

               
Cow position:
               
chr18:54993642-54993996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:33064200-33063839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 76
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:40324314-40323953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 312
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:42791198-42791559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:42792290-42792651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:49033232-49032871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 337
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:50271779-50272140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 306
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:50281824-50282185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:50281908-50282269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:51789071-51788710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
325, 337
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:52012377-52012016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
149, 157
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:52012459-52012100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:52447930-52448291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr18:56316199-56316560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
230, 220
               

               
Conread position:
               
7-369
               

               
Cow position:
               
chr18:55067044-55066682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
7-375
               

               
Cow position:
               
chr18:51400850-51401218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
301, 319
               

               
Conread position:
               
7-376
               

               
Cow position:
               
chr18:55523542-55523911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
7-380
               

               
Cow position:
               
chr18:51789575-51789198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
7-387
               

               
Cow position:
               
chr18:51752101-51751721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 369
               

               
Conread position:
               
7-388
               

               
Cow position:
               
chr18:43093604-43093219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 0
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr18:56434195-56434581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
148, 160
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:33092872-33092484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:49032560-49032172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
320, 331
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:51400598-51400986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 332
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:51765512-51765124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
322, 334
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:52428539-52428927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 228
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:52433720-52434108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
238, 228
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:52447258-52447646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:52447678-52448066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 0
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:53498035-53498429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
113, 87
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:53559824-53560212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:53559908-53560296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:54993138-54993526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:55017862-55018250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
7-391
               

               
Cow position:
               
chr18:56434363-56434751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr18:42675255-42674866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 144
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr18:51765848-51765459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr18:51969173-51969544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
325, 60
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr18:54992970-54993359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
84, 69
               

               
Conread position:
               
7-393
               

               
Cow position:
               
chr18:51367613-51367223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
320, 312
               

               
Conread position:
               
7-393
               

               
Cow position:
               
chr18:51752269-51751879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 158
               

               
Conread position:
               
7-393
               

               
Cow position:
               
chr18:51765932-51765542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
149, 140
               

               
Conread position:
               
7-393
               

               
Cow position:
               
chr18:51789827-51789437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
325, 334
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:33064368-33063977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:33064704-33064313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 312
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:40086703-40086309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
146, 24
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:41949114-41948723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 140
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:42744231-42743840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:43022417-43022026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:49032812-49032421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
146, 135
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:49032896-49032505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 336
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:51969248-51969628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:52428287-52428678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:52433468-52433859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:53509304-53509695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:53525758-53526149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:56128439-56128830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
332, 0
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:56128691-56129082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
151, 144
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:56316115-56316506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
316, 307
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr18:56329617-56329226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
353, 0
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:42959981-42959597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 154
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:42984906-42984513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 223
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:42985326-42984933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:49032476-49032083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 306
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:50099041-50099435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 150
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:51368284-51367891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:51874045-51874431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
327, 112
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:54967353-54967743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
343, 0
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:54979878-54980271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
70, 61
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:55008459-55008850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
116, 97
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:55018198-55018591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:56247498-56247112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 36
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr18:33064872-33064477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
152, 159
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr18:43093928-43093545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr18:50083600-50083995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
322, 329
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr18:50271443-50271838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 121
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr18:51368200-51367806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
324, 336
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr18:51789323-51788928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr18:51812566-51812171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr18:51839243-51838848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr18:56329533-56329138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
7-398
               

               
Cow position:
               
chr18:42827470-42827866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr18:50245723-50246120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 34
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr18:40306235-40306633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
7-401
               

               
Cow position:
               
chr18:50099797-50100196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
318, 301
               

               
Conread position:
               
7-402
               

               
Cow position:
               
chr18:40306487-40306887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
316, 301
               

               
Conread position:
               
7-405
               

               
Cow position:
               
chr18:51368536-51368134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
239, 231
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr18:42693898-42693491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr18:42792458-42792865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 0
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr18:50022508-50022098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 332
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr18:50849073-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 0
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr18:51812482-51812075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
325, 334
               

               
Conread position:
               
7-408
               

               
Cow position:
               
chr18:50059389-50058981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 0
               

               
Conread position:
               
7-409
               

               
Cow position:
               
chr18:42791786-42792195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 73
               

               
Conread position:
               
7-409
               

               
Cow position:
               
chr18:44253741-44253333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr18:42837618-42837210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr18:50848653-50849065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 0
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr18:42744483-42744070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 312
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr18:42792374-42792786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
7-414
               

               
Cow position:
               
chr18:52428035-52428449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr18:51812734-51812326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 253
               

               
Conread position:
               
7-416
               

               
Cow position:
               
chr18:41949030-41948614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
7-416
               

               
Cow position:
               
chr18:42744399-42743983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 312
               

               
Conread position:
               
7-416
               

               
Cow position:
               
chr18:42791954-42792370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 0
               

               
Conread position:
               
7-418
               

               
Cow position:
               
chr18:33064284-33063866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 161
               

               
Conread position:
               
7-418
               

               
Cow position:
               
chr18:40324482-40324064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 144
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr18:1417984-1418407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 183
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr18:55066960-55066539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
350, 419
               

               
Conread position:
               
7-425
               

               
Cow position:
               
chr18:42791870-42792297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 0
               

               
Conread position:
               
7-438
               

               
Cow position:
               
chr18:43168110-43168550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 306
               

               
Conread position:
               
8-364
               

               
Cow position:
               
chr18:22634623-22634979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
149, 134
               

               
Conread position:
               
8-368
               

               
Cow position:
               
chr18:50059556-50059196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-390
               

               
Cow position:
               
chr18:50048736-50048350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr18:42985577-42985190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 311
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr18:43175778-43175401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
141, 59
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr18:52427532-52427924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
349, 0
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr18:52432881-52433273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
349, 0
               

               
Conread position:
               
8-402
               

               
Cow position:
               
chr18:56247662-56247271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
349, 134
               

               
Conread position:
               
9-306
               

               
Cow position:
               
chr18:44153562-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
169, 133
               

               
Conread position:
               
9-312
               

               
Cow position:
               
chr18:44154470-44154164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 136
               

               
Conread position:
               
9-313
               

               
Cow position:
               
chr18:43120339-43120035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
138, 152
               

               
Conread position:
               
9-368
               

               
Cow position:
               
chr18:50031082-50030724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
283, 151
               

               
Conread position:
               
9-393
               

               
Cow position:
               
chr18:42960315-42959927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
302, 323
               

               
Conread position:
               
9-394
               

               
Cow position:
               
chr18:54968021-54968411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
10-364
               

               
Cow position:
               
chr18:42694063-42693707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
10-396
               

               
Cow position:
               
chr18:54967689-54968077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
12-414
               

               
Cow position:
               
chr18:53635301-53634894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
329, 268
               

               
Conread position:
               
13-311
               

               
Cow position:
               
chr18:56433788-56434088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 157
               

               
Conread position:
               
13-312
               

               
Cow position:
               
chr18:53498465-53498763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
13-313
               

               
Cow position:
               
chr18:56128865-56129164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
267, 0
               

               
Conread position:
               
13-317
               

               
Cow position:
               
chr18:44154379-44154075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-320
               

               
Cow position:
               
chr18:51969747-51970044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
13-356
               

               
Cow position:
               
chr18:51400772-51401115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-358
               

               
Cow position:
               
chr18:49022802-49023147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-358
               

               
Cow position:
               
chr18:52011867-52011519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
13-358
               

               
Cow position:
               
chr18:54980136-54980481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
13-358
               

               
Cow position:
               
chr18:54992892-54993237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
13-358
               

               
Cow position:
               
chr18:56316457-56316802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
228, 214
               

               
Conread position:
               
13-364
               

               
Cow position:
               
chr18:40075347-40075698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
13-366
               

               
Cow position:
               
chr18:43167612-43167964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
110, 84
               

               
Conread position:
               
13-368
               

               
Cow position:
               
chr18:43048740-43048385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 232
               

               
Conread position:
               
13-368
               

               
Cow position:
               
chr18:51970411-51970759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
13-391
               

               
Cow position:
               
chr18:53526016-53526398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
13-392
               

               
Cow position:
               
chr18:55523380-55523763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
109, 102
               

               
Conread position:
               
13-394
               

               
Cow position:
               
chr18:40306913-40307298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
169, 165
               

               
Conread position:
               
13-394
               

               
Cow position:
               
chr18:51400436-51400821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
317, 323
               

               
Conread position:
               
13-396
               

               
Cow position:
               
chr18:33093118-33092731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
13-396
               

               
Cow position:
               
chr18:50058963-50058576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
13-396
               

               
Cow position:
               
chr18:51368362-51367975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
13-396
               

               
Cow position:
               
chr18:51766093-51765706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr18:40324812-40324404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 203
               

               
Conread position:
               
13-417
               

               
Cow position:
               
chr18:44398451-44398043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
14-312
               

               
Cow position:
               
chr18:52012118-52011820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
246, 233
               

               
Conread position:
               
14-330
               

               
Cow position:
               
chr18:56329778-56329462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
14-391
               

               
Cow position:
               
chr18:53509563-53509944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 102
               

               
Conread position:
               
14-394
               

               
Cow position:
               
chr18:44253818-44253434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 185
               

               
Conread position:
               
14-398
               

               
Cow position:
               
chr18:43094088-43093710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr18:56247740-56247338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
237, 221
               

               
Conread position:
               
15-306
               

               
Cow position:
               
chr18:53560420-53560711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
15-356
               

               
Cow position:
               
chr18:22634882-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 100
               

               
Conread position:
               
15-359
               

               
Cow position:
               
chr18:55008633-55008977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
15-364
               

               
Cow position:
               
chr18:33065032-33064681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 82
               

               
Conread position:
               
15-364
               

               
Cow position:
               
chr18:54967109-54967458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
15-393
               

               
Cow position:
               
chr18:52446930-52447312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
146, 127
               

               
Conread position:
               
15-394
               

               
Cow position:
               
chr18:42675499-42675116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
146, 136
               

               
Conread position:
               
15-409
               

               
Cow position:
               
chr18:51839403-51839002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
317, 326
               

               
Conread position:
               
15-425
               

               
Cow position:
               
chr18:53586421-53586002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
316, 321
               

               
Conread position:
               
16-311
               

               
Cow position:
               
chr18:56494255-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
246, 0
               

               
Conread position:
               
16-358
               

               
Cow position:
               
chr18:56248245-56247910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
16-368
               

               
Cow position:
               
chr18:53610224-53609872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
145, 137
               

               
Conread position:
               
16-368
               

               
Cow position:
               
chr18:53635549-53635197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-410
               

               
Cow position:
               
chr18:56128616-56129015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
354, 366
               

               
Conread position:
               
17-330
               

               
Cow position:
               
chr18:51874300-51874613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
145, 138
               

               
Conread position:
               
17-357
               

               
Cow position:
               
chr18:54992728-54993068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
17-358
               

               
Cow position:
               
chr18:53610475-53610134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-358
               

               
Cow position:
               
chr18:55008887-55009228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
17-364
               

               
Cow position:
               
chr18:40306161-40306508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
137, 129
               

               
Conread position:
               
17-364
               

               
Cow position:
               
chr18:55018376-55018723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
18-368
               

               
Cow position:
               
chr18:14453859-14453509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
106, 110
               

               
Conread position:
               
18-391
               

               
Cow position:
               
chr18:14453295-14452918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
18-396
               

               
Cow position:
               
chr18:50848079-50848458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 58
               

               
Conread position:
               
18-403
               

               
Cow position:
               
chr18:51969334-51969723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
314, 275
               

               
Conread position:
               
18-405
               

               
Cow position:
               
chr18:50022071-50021678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
136, 144
               

               
Conread position:
               
18-418
               

               
Cow position:
               
chr18:50848328-50848735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 0
               

               
Conread position:
               
19-286
               

               
Cow position:
               
chr18:42693215-42692947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
202, 0
               

               
Conread position:
               
19-358
               

               
Cow position:
               
chr18:40306835-40307174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
138, 147
               

               
Conread position:
               
19-391
               

               
Cow position:
               
chr18:53498305-53498678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
19-392
               

               
Cow position:
               
chr18:51765416-51765039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
311, 300
               

               
Conread position:
               
19-394
               

               
Cow position:
               
chr18:51400274-51400653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
104, 99
               

               
Conread position:
               
19-396
               

               
Cow position:
               
chr18:51765332-51764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
338, 0
               

               
Conread position:
               
20-396
               

               
Cow position:
               
chr18:43093675-43093295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 0
               

               
Conread position:
               
20-424
               

               
Cow position:
               
chr18:43167702-43168116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
23-305
               

               
Cow position:
               
chr18:42693630-42693348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-368
               

               
Cow position:
               
chr18:42724674-42724329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
23-368
               

               
Cow position:
               
chr18:56329853-56329508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-396
               

               
Cow position:
               
chr18:49033048-49032671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 0
               

               
Conread position:
               
23-406
               

               
Cow position:
               
chr18:53610384-53609999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
337, 5
               

               
Conread position:
               
24-356
               

               
Cow position:
               
chr18:50022404-50022072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
234, 230
               

               
Conread position:
               
25-328
               

               
Cow position:
               
chr18:55009063-55009364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
25-358
               

               
Cow position:
               
chr18:14453684-14453351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
157, 153
               

               
Conread position:
               
25-363
               

               
Cow position:
               
chr18:53509658-53509996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 90
               

               
Conread position:
               
25-364
               

               
Cow position:
               
chr18:53509238-53509579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
294, 302
               

               
Conread position:
               
25-373
               

               
Cow position:
               
chr18:51838786-51838440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
305, 196
               

               
Conread position:
               
25-388
               

               
Cow position:
               
chr18:54993492-54993859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
25-390
               

               
Cow position:
               
chr18:53525692-53526061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
133, 126
               

               
Conread position:
               
25-391
               

               
Cow position:
               
chr18:55017964-55018334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
25-394
               

               
Cow position:
               
chr18:53635624-53635251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
234, 217
               

               
Conread position:
               
25-394
               

               
Cow position:
               
chr18:53635708-53635335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
335, 0
               

               
Conread position:
               
25-394
               

               
Cow position:
               
chr18:56128541-56128914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
229, 213
               

               
Conread position:
               
25-396
               

               
Cow position:
               
chr18:33064938-33064563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
218, 227
               

               
Conread position:
               
25-396
               

               
Cow position:
               
chr18:56316049-56316424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
335, 0
               

               
Conread position:
               
25-397
               

               
Cow position:
               
chr18:55067110-55066733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
98, 90
               

               
Conread position:
               
25-419
               

               
Cow position:
               
chr18:1418169-1418571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 318
               

               
Conread position:
               
26-368
               

               
Cow position:
               
chr18:51368602-51368259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
56, 294
               

               
Conread position:
               
26-397
               

               
Cow position:
               
chr18:51400533-51400909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
305, 310
               

               
Conread position:
               
27-294
               

               
Cow position:
               
chr18:43053457-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
27-310
               

               
Cow position:
               
chr18:53609961-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
253, 0
               

               
Conread position:
               
27-337
               

               
Cow position:
               
chr18:56330185-56329875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
27-391
               

               
Cow position:
               
chr18:56494014-56494382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
233, 227
               

               
Conread position:
               
27-394
               

               
Cow position:
               
chr18:40324882-40324511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 128
               

               
Conread position:
               
27-401
               

               
Cow position:
               
chr18:50098977-50099356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
209, 214
               

               
Conread position:
               
29-311
               

               
Cow position:
               
chr18:43175352-43175070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-357
               

               
Cow position:
               
chr18:44253887-44253559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
125, 132
               

               
Conread position:
               
29-392
               

               
Cow position:
               
chr18:49033378-49033011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
331, 0
               

               
Conread position:
               
29-396
               

               
Cow position:
               
chr18:43120403-43120032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
29-397
               

               
Cow position:
               
chr18:50281678-50282051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
31-364
               

               
Cow position:
               
chr18:50083288-50083623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
326, 0
               

               
Conread position:
               
33-393
               

               
Cow position:
               
chr18:51752327-51751963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
25, 39
               

               
Conread position:
               
34-297
               

               
Cow position:
               
chr18:51873709-51873972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
34-312
               

               
Cow position:
               
chr18:56247806-56247526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr18:51789884-51789521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 127
               

               
Conread position:
               
34-417
               

               
Cow position:
               
chr18:41197500-41197890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 379
               

               
Conread position:
               
38-368
               

               
Cow position:
               
chr18:50295201-50295531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
148, 140
               

               
Conread position:
               
40-391
               

               
Cow position:
               
chr18:56493772-56494130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
41-233
               

               
Cow position:
               
chr18:51969039-51969231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-356
               

               
Cow position:
               
chr18:43175592-43175277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
242, 223
               

               
Conread position:
               
41-391
               

               
Cow position:
               
chr18:51839545-51839191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
281, 272
               

               
Conread position:
               
41-397
               

               
Cow position:
               
chr18:50098907-50099268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
297, 279
               

               
Conread position:
               
43-425
               

               
Cow position:
               
chr18:1417936-1418327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
45-409
               

               
Cow position:
               
chr18:43094219-43093857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
294, 38
               

               
Conread position:
               
47-311
               

               
Cow position:
               
chr18:50031128-50030867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 66
               

               
Conread position:
               
49-311
               

               
Cow position:
               
chr18:55523332-55523594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
57-419
               

               
Cow position:
               
chr18:50271408-50271778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
75-394
               

               
Cow position:
               
chr18:40086970-40086650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
75-394
               

               
Cow position:
               
chr18:44154488-44154162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 182
               

               
Conread position:
               
75-396
               

               
Cow position:
               
chr18:44184920-44184595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
282, 0
               

               
Conread position:
               
75-406
               

               
Cow position:
               
chr18:42790846-42791182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
81-379
               

               
Cow position:
               
chr18:51970311-51970608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr18:52446913-52447187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
163, 153
               

               
Conread position:
               
87-356
               

               
Cow position:
               
chr18:44398461-44398192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
96-420
               

               
Cow position:
               
chr18:43048741-43048409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
97-384
               

               
Cow position:
               
chr18:51873689-51873975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
103-391
               

               
Cow position:
               
chr18:53509232-53509524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
103-391
               

               
Cow position:
               
chr18:53525686-53525978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
103-397
               

               
Cow position:
               
chr18:51969018-51969302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
287, 12
               

               
Conread position:
               
107-425
               

               
Cow position:
               
chr18:56128031-56128359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 151
               

               
Conread position:
               
107-426
               

               
Cow position:
               
chr18:53636134-53635805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
6, 241
               

               
Conread position:
               
111-358
               

               
Cow position:
               
chr18:43053457-43053210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
111-392
               

               
Cow position:
               
chr18:42827406-42827691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
246, 0
               

               
Conread position:
               
121-412
               

               
Cow position:
               
chr18:51839549-51839258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-396
               

               
Cow position:
               
chr18:42837981-42837729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
49, 40
               

               
Conread position:
               
160-396
               

               
Cow position:
               
chr18:43023104-43022864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
161-356
               

               
Cow position:
               
chr18:44239725-44239920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
161-419
               

               
Cow position:
               
chr18:41949380-41949115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
168-416
               

               
Cow position:
               
chr18:44398464-44398209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
174-411
               

               
Cow position:
               
chr18:51874044-51874274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 72
               
Show alignments to all cow chromosomes.