Cow genome map
| Conread name: | Ss1.1-End4-UMC-pd12_14end-006-a08.3 |
| Conread position: | 1-255 |
| Cow position: | chr6:49341217-49341469 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 3-364 |
| Cow position: | chr6:49341051-49341414 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 243 |
| Conread position: | 4-397 |
| Cow position: | chr6:49396023-49396415 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 351, 201 |
| Conread position: | 5-311 |
| Cow position: | chr6:49341137-49341443 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-359 |
| Cow position: | chr6:49396607-49396960 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 326, 335 |
| Conread position: | 6-392 |
| Cow position: | chr6:49340718-49341108 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 136 |
| Conread position: | 6-396 |
| Cow position: | chr6:49340466-49340860 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 153 |
| Conread position: | 6-396 |
| Cow position: | chr6:49340970-49341364 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 153 |
| Conread position: | 7-312 |
| Cow position: | chr6:49396692-49396997 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-358 |
| Cow position: | chr6:49340803-49341154 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-368 |
| Cow position: | chr6:49396272-49396633 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 325, 334 |
| Conread position: | 7-368 |
| Cow position: | chr6:49396524-49396885 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-393 |
| Cow position: | chr6:49396194-49396578 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 325, 34 |
| Conread position: | 7-396 |
| Cow position: | chr6:49340635-49341028 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 217 |
| Conread position: | 7-397 |
| Cow position: | chr6:49396356-49396751 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 323, 334 |
| Conread position: | 7-418 |
| Cow position: | chr6:49340887-49341305 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 236 |
| Conread position: | 13-391 |
| Cow position: | chr6:49340389-49340771 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 325 |
| Conread position: | 66-368 |
| Cow position: | chr6:49340358-49340660 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.