Cow genome map
Conread name: | Ss1.1-End4-UMC-pd12_14end-006-a08.3 |
Conread position: | 1-396 |
Cow position: | chr7:1438306-1438705 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 126 |
Conread position: | 1-402 |
Cow position: | chr7:18390135-18390541 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 353, 0 |
Conread position: | 1-405 |
Cow position: | chr7:11601046-11600639 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 163 |
Conread position: | 3-340 |
Cow position: | chr7:1014164-1014501 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 214 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-356 |
Cow position: | chr7:1014332-1014679 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 228 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 302, 0 |
Conread position: | 3-368 |
Cow position: | chr7:42878629-42878264 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-391 |
Cow position: | chr7:1014998-1015390 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 319, 310 |
Conread position: | 3-391 |
Cow position: | chr7:3180428-3180817 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 386 |
Conread position: | 3-394 |
Cow position: | chr7:3179756-3180151 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 319, 308 |
Conread position: | 3-394 |
Cow position: | chr7:3180260-3180655 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 0 |
Conread position: | 3-396 |
Cow position: | chr7:3180176-3180573 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 0 |
Conread position: | 3-403 |
Cow position: | chr7:42878881-42878476 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 151 |
Conread position: | 3-416 |
Cow position: | chr7:42878797-42878377 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 0 |
Conread position: | 3-416 |
Cow position: | chr7:42879049-42878629 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 306, 312 |
Conread position: | 3-417 |
Cow position: | chr7:42878965-42878544 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 0 |
Conread position: | 3-418 |
Cow position: | chr7:42878713-42878291 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 0 |
Conread position: | 3-422 |
Cow position: | chr7:1014914-1015339 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 336 |
Conread position: | 4-292 |
Cow position: | chr7:11434511-11434223 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 188 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 164, 159 |
Conread position: | 4-376 |
Cow position: | chr7:8325801-8326176 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 252 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 81, 66 |
Conread position: | 4-391 |
Cow position: | chr7:8243195-8243585 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 251 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 161, 168 |
Conread position: | 4-394 |
Cow position: | chr7:8325297-8325691 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 258 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 80, 68 |
Conread position: | 4-396 |
Cow position: | chr7:8242859-8243255 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 253 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 316, 331 |
Conread position: | 5-233 |
Cow position: | chr7:1440035-1440263 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 169 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 148, 141 |
Conread position: | 5-311 |
Cow position: | chr7:1438226-1438532 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 203 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-337 |
Cow position: | chr7:1438394-1438726 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 218 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 148, 156 |
Conread position: | 5-391 |
Cow position: | chr7:1439868-1440257 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 103 |
Conread position: | 5-416 |
Cow position: | chr7:42879131-42878713 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 0 |
Conread position: | 5-425 |
Cow position: | chr7:42879215-42878789 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 422 |
Conread position: | 6-163 |
Cow position: | chr7:1015337-1015496 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 115 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 6-266 |
Cow position: | chr7:18390560-18390820 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 172 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-311 |
Cow position: | chr7:8243448-8243753 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 195 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 160, 167 |
Conread position: | 6-311 |
Cow position: | chr7:8277406-8277711 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 193 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 154, 140 |
Conread position: | 6-311 |
Cow position: | chr7:8278246-8278549 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 196 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 91, 71 |
Conread position: | 6-311 |
Cow position: | chr7:11434586-11434288 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 197 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 242, 43 |
Conread position: | 6-332 |
Cow position: | chr7:1439953-1440278 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 22 |
Conread position: | 6-358 |
Cow position: | chr7:1015085-1015437 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 122 |
Conread position: | 6-358 |
Cow position: | chr7:3179927-3180279 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-358 |
Cow position: | chr7:18390056-18390408 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 225 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-368 |
Cow position: | chr7:1014833-1015195 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-391 |
Cow position: | chr7:8277658-8278047 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 248 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 116, 109 |
Conread position: | 6-394 |
Cow position: | chr7:8243700-8244089 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 249 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 314, 295 |
Conread position: | 6-394 |
Cow position: | chr7:8324879-8325271 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 260 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 158, 149 |
Conread position: | 6-394 |
Cow position: | chr7:11601209-11600817 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 148 |
Conread position: | 6-396 |
Cow position: | chr7:1439448-1439844 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 140 |
Conread position: | 6-396 |
Cow position: | chr7:1439786-1440178 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 85 |
Conread position: | 6-396 |
Cow position: | chr7:3180347-3180741 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 351, 0 |
Conread position: | 6-396 |
Cow position: | chr7:8324795-8325189 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 263 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 143, 166 |
Conread position: | 6-396 |
Cow position: | chr7:18390392-18390786 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 0 |
Conread position: | 6-397 |
Cow position: | chr7:1014419-1014809 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 271 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 155, 145 |
Conread position: | 6-412 |
Cow position: | chr7:8325131-8325540 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 265 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 162, 149 |
Conread position: | 6-422 |
Cow position: | chr7:1439703-1440122 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 58 |
Conread position: | 6-422 |
Cow position: | chr7:8277742-8278160 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 280 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 140, 165 |
Conread position: | 7-298 |
Cow position: | chr7:1015170-1015460 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 203 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 284, 0 |
Conread position: | 7-318 |
Cow position: | chr7:8324964-8325275 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 202 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 225, 252 |
Conread position: | 7-358 |
Cow position: | chr7:18390225-18390576 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 108 |
Conread position: | 7-391 |
Cow position: | chr7:1014750-1015138 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 108 |
Conread position: | 7-396 |
Cow position: | chr7:3180096-3180489 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 60 |
Conread position: | 7-416 |
Cow position: | chr7:8243617-8244027 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 248 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 324, 393 |
Conread position: | 7-426 |
Cow position: | chr7:3180012-3180437 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 327, 336 |
Conread position: | 9-357 |
Cow position: | chr7:1438148-1438494 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 220 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 140, 48 |
Conread position: | 9-394 |
Cow position: | chr7:1014668-1015057 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 348, 0 |
Conread position: | 11-376 |
Cow position: | chr7:11600784-11600420 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 143 |
Conread position: | 13-311 |
Cow position: | chr7:8325474-8325772 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 188 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 142, 160 |
Conread position: | 13-323 |
Cow position: | chr7:18390483-18390793 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 209 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-364 |
Cow position: | chr7:8278001-8278354 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 160 |
Conread position: | 13-393 |
Cow position: | chr7:3179850-3180234 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 315, 300 |
Conread position: | 13-394 |
Cow position: | chr7:18390315-18390700 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 347, 0 |
Conread position: | 13-396 |
Cow position: | chr7:11600866-11600479 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 347, 0 |
Conread position: | 13-404 |
Cow position: | chr7:11601118-11600723 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 263 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 237, 223 |
Conread position: | 20-394 |
Cow position: | chr7:18389986-18390364 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 244 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 137, 147 |
Conread position: | 20-403 |
Cow position: | chr7:42879452-42879064 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 241 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 19, 9 |
Conread position: | 23-356 |
Cow position: | chr7:1014268-1014601 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 223 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 305, 290 |
Conread position: | 25-311 |
Cow position: | chr7:8277257-8277543 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 191 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 61, 42 |
Conread position: | 25-369 |
Cow position: | chr7:8278097-8278442 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 224 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 151, 133 |
Conread position: | 25-394 |
Cow position: | chr7:8325738-8326111 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 248 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 43, 63 |
Conread position: | 25-399 |
Cow position: | chr7:42879363-42878984 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 16 |
Conread position: | 26-394 |
Cow position: | chr7:1014105-1014475 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 225 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 331, 19 |
Conread position: | 28-416 |
Cow position: | chr7:42879276-42878881 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 39 |
Conread position: | 29-396 |
Cow position: | chr7:8277597-8277968 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 236 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 283, 312 |
Conread position: | 34-368 |
Cow position: | chr7:8277854-8278188 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 217 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 145, 124 |
Conread position: | 34-416 |
Cow position: | chr7:8242805-8243190 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 246 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 112, 138 |
Conread position: | 37-314 |
Cow position: | chr7:8277521-8277797 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 182 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 129, 121 |
Conread position: | 43-390 |
Cow position: | chr7:3179712-3180063 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 0 |
Conread position: | 70-391 |
Cow position: | chr7:3179655-3179980 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 210 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 53, 42 |
Conread position: | 109-396 |
Cow position: | chr7:8277257-8277548 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 185 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 126, 137 |
Conread position: | 132-402 |
Cow position: | chr7:11601250-11600976 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 177 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 228, 23 |
Show alignments to all cow chromosomes.