Cow genome map

Conread name: Ss1.1-Fet1-UMC-pd20fet-016-c11.3

Conread position: 9-223
Cow position: chr1:96304958-96304744 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 123, 10

Conread position: 17-198
Cow position: chr1:28354569-28354747 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 96

Conread position: 18-220
Cow position: chr1:731957-731745 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 181

Conread position: 21-205
Cow position: chr1:42175743-42175937 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 21-208
Cow position: chr1:32217264-32217449 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 15

Conread position: 21-215
Cow position: chr1:40077812-40078013 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 145

Conread position: 21-215
Cow position: chr1:94713146-94712945 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 94

Conread position: 21-217
Cow position: chr1:36688359-36688155 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 102, 74

Conread position: 21-218
Cow position: chr1:42152459-42152268 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 125, 75

Conread position: 21-220
Cow position: chr1:69442504-69442292 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 85

Conread position: 22-210
Cow position: chr1:75227298-75227113 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 123, 11

Conread position: 22-224
Cow position: chr1:69411675-69411468 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 101, 15

Conread position: 23-216
Cow position: chr1:95835776-95835576 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 100, 11

Conread position: 23-220
Cow position: chr1:91023449-91023240 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 25-189
Cow position: chr1:78066517-78066351 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 108

Conread position: 25-204
Cow position: chr1:51394441-51394625 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 86, 0

Conread position: 25-205
Cow position: chr1:90621486-90621295 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 12

Conread position: 25-219
Cow position: chr1:52450796-52450989 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 121, 12

Conread position: 26-173
Cow position: chr1:13637642-13637489 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 11

Conread position: 26-173
Cow position: chr1:53397996-53398149 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 26-203
Cow position: chr1:25383689-25383875 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 11

Conread position: 26-204
Cow position: chr1:50329516-50329696 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 11

Conread position: 26-204
Cow position: chr1:55705225-55705040 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 11

Conread position: 26-205
Cow position: chr1:41056699-41056888 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 11

Conread position: 26-205
Cow position: chr1:71946063-71945869 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 153

Conread position: 26-211
Cow position: chr1:3942194-3942003 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 11

Conread position: 26-211
Cow position: chr1:100852730-100852918 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 10

Conread position: 26-217
Cow position: chr1:67674580-67674385 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 72

Conread position: 26-218
Cow position: chr1:75744885-75745086 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 26-218
Cow position: chr1:93590565-93590362 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 16, 11

Conread position: 26-219
Cow position: chr1:54267916-54267711 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 11

Conread position: 26-220
Cow position: chr1:46143440-46143247 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 11

Conread position: 27-188
Cow position: chr1:17196603-17196434 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 27-189
Cow position: chr1:5597188-5597020 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 92

Conread position: 27-189
Cow position: chr1:41027099-41027264 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 0

Conread position: 27-195
Cow position: chr1:71078936-71078764 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 18, 86

Conread position: 27-203
Cow position: chr1:22192793-22192976 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 27-205
Cow position: chr1:49825040-49824854 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 27-205
Cow position: chr1:79640264-79640079 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 92

Conread position: 27-208
Cow position: chr1:78811062-78811248 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 169

Conread position: 27-209
Cow position: chr1:64811260-64811450 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 27-211
Cow position: chr1:24133036-24132849 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 13

Conread position: 27-211
Cow position: chr1:68817775-68817587 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 157

Conread position: 27-211
Cow position: chr1:83025140-83024951 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 27-215
Cow position: chr1:88913344-88913540 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 12, 33

Conread position: 27-216
Cow position: chr1:82936573-82936383 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 21

Conread position: 27-218
Cow position: chr1:11708994-11708803 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 79

Conread position: 27-218
Cow position: chr1:72011789-72011596 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 98

Conread position: 27-218
Cow position: chr1:78838820-78839010 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 91

Conread position: 27-221
Cow position: chr1:78857305-78857099 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 27-237
Cow position: chr1:29935363-29935151 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 86

Conread position: 27-238
Cow position: chr1:70044379-70044594 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 13

Conread position: 27-239
Cow position: chr1:98060087-98060304 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 28-204
Cow position: chr1:19384432-19384248 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 28-209
Cow position: chr1:100800743-100800557 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 28-211
Cow position: chr1:87934245-87934066 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 28-218
Cow position: chr1:51445912-51446103 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 19

Conread position: 29-215
Cow position: chr1:1380026-1380219 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 11

Conread position: 30-214
Cow position: chr1:77810733-77810543 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 6, 149

Conread position: 30-218
Cow position: chr1:84104031-84103837 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 10

Conread position: 30-222
Cow position: chr1:3667006-3666800 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 31-199
Cow position: chr1:47886451-47886278 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 31-205
Cow position: chr1:102266239-102266062 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 31-207
Cow position: chr1:83677295-83677115 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 66

Conread position: 31-209
Cow position: chr1:40303580-40303759 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 23

Conread position: 31-209
Cow position: chr1:84594917-84595102 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 86

Conread position: 31-210
Cow position: chr1:54569727-54569914 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 31-211
Cow position: chr1:6731209-6731392 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 92, 174

Conread position: 31-217
Cow position: chr1:7752408-7752598 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 92, 154

Conread position: 31-218
Cow position: chr1:16060975-16060787 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 100

Conread position: 31-218
Cow position: chr1:38706825-38706633 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 19, 23

Conread position: 31-218
Cow position: chr1:53370112-53370310 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 31-222
Cow position: chr1:63994526-63994326 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 31-244
Cow position: chr1:79718835-79719055 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 43

Conread position: 32-203
Cow position: chr1:68855194-68855372 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 32-210
Cow position: chr1:89509892-89509713 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 8

Conread position: 32-215
Cow position: chr1:69378570-69378376 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 71

Conread position: 34-191
Cow position: chr1:101691912-101692069 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 18

Conread position: 37-187
Cow position: chr1:63905224-63905074 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 93

Conread position: 37-189
Cow position: chr1:11729210-11729364 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 37-189
Cow position: chr1:51860526-51860372 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 80

Conread position: 37-189
Cow position: chr1:72813651-72813809 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 124

Conread position: 37-189
Cow position: chr1:90595535-90595385 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 109, 81

Conread position: 37-189
Cow position: chr1:96558814-96558654 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 37-191
Cow position: chr1:48206501-48206346 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 140

Conread position: 37-197
Cow position: chr1:1802202-1802370 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 37-202
Cow position: chr1:89388375-89388548 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 37-203
Cow position: chr1:20950749-20950923 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 95, 77

Conread position: 37-203
Cow position: chr1:32014231-32014397 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 109, 81

Conread position: 37-205
Cow position: chr1:49297686-49297859 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 37-205
Cow position: chr1:64804067-64803889 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 37-207
Cow position: chr1:65318610-65318787 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 65

Conread position: 37-207
Cow position: chr1:71664862-71664684 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 37-210
Cow position: chr1:34159870-34160044 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 81

Conread position: 37-211
Cow position: chr1:42541633-42541804 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 81

Conread position: 37-211
Cow position: chr1:54156699-54156520 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 16

Conread position: 37-211
Cow position: chr1:62997830-62998016 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 37-211
Cow position: chr1:69539726-69539900 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 109, 88

Conread position: 37-211
Cow position: chr1:102784988-102785160 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 44

Conread position: 37-212
Cow position: chr1:22461203-22461023 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 60

Conread position: 37-212
Cow position: chr1:22828535-22828356 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 37-214
Cow position: chr1:33206846-33206657 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 37-215
Cow position: chr1:21787371-21787540 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 37-215
Cow position: chr1:22823940-22824127 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 37-215
Cow position: chr1:55428921-55428735 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 95, 81

Conread position: 37-215
Cow position: chr1:70483299-70483116 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 37-216
Cow position: chr1:6031659-6031846 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 157

Conread position: 37-218
Cow position: chr1:78096962-78097146 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 162

Conread position: 37-219
Cow position: chr1:36998220-36998406 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 17

Conread position: 37-219
Cow position: chr1:66898463-66898272 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 84

Conread position: 37-219
Cow position: chr1:72068800-72068605 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 37-219
Cow position: chr1:95152906-95153103 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 37-220
Cow position: chr1:81481347-81481161 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 86, 0

Conread position: 37-221
Cow position: chr1:47790627-47790444 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 35

Conread position: 37-221
Cow position: chr1:70538646-70538832 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 109, 87

Conread position: 37-226
Cow position: chr1:96964351-96964554 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 78, 0

Conread position: 37-235
Cow position: chr1:72105441-72105638 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 81

Conread position: 37-236
Cow position: chr1:852205-852409 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 186

Conread position: 37-239
Cow position: chr1:26895776-26895567 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 37-240
Cow position: chr1:81568993-81568782 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 37-247
Cow position: chr1:70416725-70416506 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 37-285
Cow position: chr1:52370136-52369898 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 16

Conread position: 38-202
Cow position: chr1:54258603-54258774 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 35

Conread position: 38-210
Cow position: chr1:10633082-10633252 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 108, 80

Conread position: 38-215
Cow position: chr1:12464628-12464448 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 90, 167

Conread position: 38-215
Cow position: chr1:84787306-84787478 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 86

Conread position: 38-218
Cow position: chr1:5284196-5284004 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 38-219
Cow position: chr1:25022039-25021855 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 92, 80

Conread position: 38-219
Cow position: chr1:89146838-89146650 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 14

Conread position: 38-219
Cow position: chr1:101507396-101507574 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 157, 57

Conread position: 38-224
Cow position: chr1:41022455-41022643 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 92, 80

Conread position: 38-231
Cow position: chr1:53402817-53403017 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 188

Conread position: 39-188
Cow position: chr1:101525891-101525729 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 14, 87

Conread position: 39-252
Cow position: chr1:43855335-43855542 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 107, 12

Conread position: 40-134
Cow position: chr1:53640750-53640843 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 40-157
Cow position: chr1:81580213-81580331 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 14, 80

Conread position: 40-158
Cow position: chr1:52039673-52039794 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 40-185
Cow position: chr1:64302209-64302062 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 87

Conread position: 40-185
Cow position: chr1:89158090-89157942 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 81

Conread position: 40-186
Cow position: chr1:37321963-37321821 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 13

Conread position: 40-186
Cow position: chr1:49980745-49980897 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 40-187
Cow position: chr1:89448935-89449088 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 113

Conread position: 40-188
Cow position: chr1:23372894-23373052 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 40-189
Cow position: chr1:6941503-6941658 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 40-189
Cow position: chr1:6958916-6959071 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 40-189
Cow position: chr1:63079045-63079193 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 31

Conread position: 40-189
Cow position: chr1:71636288-71636136 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 14, 58

Conread position: 40-189
Cow position: chr1:97833745-97833889 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 106, 77

Conread position: 40-196
Cow position: chr1:5872744-5872575 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 40-199
Cow position: chr1:76518457-76518627 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 57

Conread position: 40-201
Cow position: chr1:100474269-100474444 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 40-203
Cow position: chr1:32035675-32035507 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 141

Conread position: 40-203
Cow position: chr1:33331056-33330895 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 153, 89

Conread position: 40-205
Cow position: chr1:42774945-42775115 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 121

Conread position: 40-205
Cow position: chr1:52912862-52912684 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 36

Conread position: 40-205
Cow position: chr1:84811904-84811730 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 40-206
Cow position: chr1:81290542-81290713 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 40-209
Cow position: chr1:39426970-39426804 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 76

Conread position: 40-210
Cow position: chr1:1606099-1605918 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 13, 0

Conread position: 40-210
Cow position: chr1:17056029-17056206 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 64

Conread position: 40-210
Cow position: chr1:42353196-42353362 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 15, 60

Conread position: 40-210
Cow position: chr1:61011216-61011387 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 14, 81

Conread position: 40-210
Cow position: chr1:78794196-78794024 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 80

Conread position: 40-211
Cow position: chr1:196970-196791 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 70

Conread position: 40-211
Cow position: chr1:41697093-41697269 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 40-211
Cow position: chr1:48618209-48618034 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 160

Conread position: 40-211
Cow position: chr1:50930941-50930766 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 40-211
Cow position: chr1:63460913-63461092 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 40-211
Cow position: chr1:87197855-87198032 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 143

Conread position: 40-212
Cow position: chr1:91066116-91065942 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 22

Conread position: 40-213
Cow position: chr1:31794970-31794787 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 13

Conread position: 40-214
Cow position: chr1:4329865-4329690 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 71

Conread position: 40-214
Cow position: chr1:24542535-24542348 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 14, 0

Conread position: 40-215
Cow position: chr1:42887242-42887061 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 80

Conread position: 40-216
Cow position: chr1:524843-525025 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 80

Conread position: 40-216
Cow position: chr1:45315601-45315409 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 86

Conread position: 40-217
Cow position: chr1:69678284-69678102 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 17

Conread position: 40-217
Cow position: chr1:87095179-87094994 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 161

Conread position: 40-218
Cow position: chr1:72422373-72422185 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 30

Conread position: 40-218
Cow position: chr1:85339422-85339601 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 105, 78

Conread position: 40-219
Cow position: chr1:15547506-15547687 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 85

Conread position: 40-219
Cow position: chr1:23969022-23968840 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 92

Conread position: 40-221
Cow position: chr1:55685943-55685752 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 40-233
Cow position: chr1:100812256-100812065 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 136

Conread position: 40-235
Cow position: chr1:31256191-31255992 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 88

Conread position: 40-235
Cow position: chr1:35671577-35671774 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 77

Conread position: 40-252
Cow position: chr1:62469096-62469310 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 179

Conread position: 41-189
Cow position: chr1:33998795-33998941 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 76

Conread position: 41-202
Cow position: chr1:7965885-7966052 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 41-202
Cow position: chr1:53474195-53474353 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 105, 34

Conread position: 41-209
Cow position: chr1:4294383-4294557 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 61

Conread position: 41-211
Cow position: chr1:78079759-78079942 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 12

Conread position: 41-212
Cow position: chr1:15333927-15334103 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 41-214
Cow position: chr1:59518954-59519128 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 82, 70

Conread position: 41-215
Cow position: chr1:79178667-79178849 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 41-218
Cow position: chr1:91743423-91743244 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 93, 82

Conread position: 41-218
Cow position: chr1:99221595-99221410 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 41-219
Cow position: chr1:25955934-25956120 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 41-219
Cow position: chr1:30028193-30028010 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 41-220
Cow position: chr1:77462390-77462567 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 14

Conread position: 41-222
Cow position: chr1:102768213-102768404 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 9, 183

Conread position: 41-224
Cow position: chr1:100575999-100575813 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 42-160
Cow position: chr1:21957507-21957391 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 80

Conread position: 42-211
Cow position: chr1:89158661-89158488 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 43

Conread position: 42-221
Cow position: chr1:1878061-1878246 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 11

Conread position: 42-236
Cow position: chr1:47658386-47658586 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 81, 11

Conread position: 44-188
Cow position: chr1:81638590-81638730 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 102, 74

Conread position: 44-189
Cow position: chr1:56477634-56477777 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 80

Conread position: 44-189
Cow position: chr1:73721402-73721556 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 68

Conread position: 44-189
Cow position: chr1:99605145-99605000 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 133

Conread position: 44-202
Cow position: chr1:10470468-10470627 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 44-208
Cow position: chr1:10778605-10778773 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 74

Conread position: 44-210
Cow position: chr1:22525920-22526086 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 152

Conread position: 44-211
Cow position: chr1:8657-8832 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 44-211
Cow position: chr1:33720143-33720323 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 44-211
Cow position: chr1:37726378-37726200 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 44-211
Cow position: chr1:39684102-39683925 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 82, 43

Conread position: 44-211
Cow position: chr1:43499254-43499096 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 102, 58

Conread position: 44-211
Cow position: chr1:61884955-61885130 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 44-212
Cow position: chr1:51968579-51968742 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 74

Conread position: 44-213
Cow position: chr1:56225827-56225998 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 78, 93

Conread position: 44-215
Cow position: chr1:31934549-31934723 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 58

Conread position: 44-215
Cow position: chr1:61005520-61005335 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 15

Conread position: 44-215
Cow position: chr1:79170111-79169933 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 79, 138

Conread position: 44-215
Cow position: chr1:96081522-96081698 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 36

Conread position: 44-215
Cow position: chr1:100573585-100573412 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 165

Conread position: 44-218
Cow position: chr1:41138102-41137917 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 102, 0

Conread position: 44-218
Cow position: chr1:66445002-66445182 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 75

Conread position: 44-218
Cow position: chr1:98557077-98556896 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 44-218
Cow position: chr1:98583795-98583972 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 74

Conread position: 44-219
Cow position: chr1:102753901-102754075 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 73

Conread position: 44-221
Cow position: chr1:5751355-5751542 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 44-223
Cow position: chr1:82880686-82880858 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 74

Conread position: 44-225
Cow position: chr1:45555408-45555595 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 58

Conread position: 44-229
Cow position: chr1:53456853-53457044 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 20

Conread position: 46-204
Cow position: chr1:83072485-83072649 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 46-207
Cow position: chr1:3034155-3033999 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 56

Conread position: 47-208
Cow position: chr1:61391744-61391583 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 50

Conread position: 50-210
Cow position: chr1:31801871-31801707 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 51

Conread position: 50-215
Cow position: chr1:50906632-50906459 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 79, 68

Conread position: 52-210
Cow position: chr1:30862366-30862200 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 49

Conread position: 52-221
Cow position: chr1:86110694-86110518 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 69, 129

Conread position: 53-185
Cow position: chr1:62964317-62964456 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 53-188
Cow position: chr1:43389001-43388863 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 76, 64

Conread position: 53-188
Cow position: chr1:46354388-46354249 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 64

Conread position: 53-188
Cow position: chr1:95499445-95499305 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 53-188
Cow position: chr1:97090377-97090508 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 53-189
Cow position: chr1:45223632-45223768 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 65

Conread position: 53-189
Cow position: chr1:66752578-66752440 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 53-189
Cow position: chr1:101280687-101280545 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 53-199
Cow position: chr1:4512034-4512177 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 116

Conread position: 53-203
Cow position: chr1:42868889-42868739 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 65

Conread position: 53-203
Cow position: chr1:54478380-54478522 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 71

Conread position: 53-203
Cow position: chr1:55753165-55753013 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 53-205
Cow position: chr1:38753974-38754123 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 76

Conread position: 53-205
Cow position: chr1:45099811-45099964 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 53-205
Cow position: chr1:81858849-81858695 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 146

Conread position: 53-205
Cow position: chr1:89835768-89835918 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 65

Conread position: 53-207
Cow position: chr1:15628333-15628489 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 53-209
Cow position: chr1:19599310-19599149 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 81, 42

Conread position: 53-209
Cow position: chr1:59551488-59551651 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 53-209
Cow position: chr1:100823088-100823251 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 156

Conread position: 53-210
Cow position: chr1:42796928-42797089 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 129

Conread position: 53-210
Cow position: chr1:43352605-43352439 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 64

Conread position: 53-210
Cow position: chr1:60045036-60045202 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 50

Conread position: 53-210
Cow position: chr1:74084140-74083972 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 62

Conread position: 53-211
Cow position: chr1:83973-84128 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 63

Conread position: 53-211
Cow position: chr1:6854257-6854105 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 65

Conread position: 53-211
Cow position: chr1:13828537-13828372 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 46

Conread position: 53-211
Cow position: chr1:72304337-72304181 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 133, 44

Conread position: 53-212
Cow position: chr1:64516840-64516679 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 6

Conread position: 53-212
Cow position: chr1:68688634-68688798 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 85

Conread position: 53-212
Cow position: chr1:101714168-101714331 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 53-213
Cow position: chr1:67654269-67654104 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 53-214
Cow position: chr1:15875711-15875877 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 53-214
Cow position: chr1:20871508-20871339 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 53-215
Cow position: chr1:20537256-20537420 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 53-215
Cow position: chr1:24530552-24530716 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 53-215
Cow position: chr1:55230027-55230191 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 64

Conread position: 53-215
Cow position: chr1:56719391-56719563 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 42

Conread position: 53-215
Cow position: chr1:95156913-95156748 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 156

Conread position: 53-217
Cow position: chr1:30983446-30983271 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 53-218
Cow position: chr1:13547926-13547757 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 49

Conread position: 53-218
Cow position: chr1:34001098-34001263 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 65

Conread position: 53-218
Cow position: chr1:81615705-81615875 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 65

Conread position: 53-218
Cow position: chr1:90904705-90904533 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 64

Conread position: 53-218
Cow position: chr1:101789042-101788875 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 64

Conread position: 53-219
Cow position: chr1:65028585-65028741 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 53-226
Cow position: chr1:64572566-64572741 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 164

Conread position: 53-234
Cow position: chr1:90267771-90267956 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 168

Conread position: 53-236
Cow position: chr1:23101726-23101923 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 53-236
Cow position: chr1:45019750-45019563 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 47, 76

Conread position: 53-236
Cow position: chr1:102730711-102730513 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 53-242
Cow position: chr1:56913478-56913290 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 51

Conread position: 53-245
Cow position: chr1:43379311-43379107 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 70

Conread position: 53-251
Cow position: chr1:56225520-56225731 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 54-188
Cow position: chr1:7739999-7740134 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 64

Conread position: 54-189
Cow position: chr1:3923748-3923612 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 82, 64

Conread position: 54-189
Cow position: chr1:39224874-39224747 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 70

Conread position: 54-203
Cow position: chr1:68863083-68863225 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 61

Conread position: 54-204
Cow position: chr1:99031927-99031769 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 57

Conread position: 54-209
Cow position: chr1:99642317-99642159 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 68, 143

Conread position: 54-210
Cow position: chr1:82337728-82337568 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 146

Conread position: 54-212
Cow position: chr1:95618694-95618856 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 54-214
Cow position: chr1:771728-771571 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 158, 63

Conread position: 54-215
Cow position: chr1:83092916-83093083 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 154

Conread position: 54-221
Cow position: chr1:100552027-100552189 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 92, 64

Conread position: 54-225
Cow position: chr1:6394609-6394783 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 43

Conread position: 55-187
Cow position: chr1:100762129-100762264 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 55-210
Cow position: chr1:70435051-70435199 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 52

Conread position: 55-212
Cow position: chr1:62182077-62181923 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 48

Conread position: 55-213
Cow position: chr1:90192469-90192638 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 47

Conread position: 55-215
Cow position: chr1:43505582-43505741 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 63

Conread position: 55-215
Cow position: chr1:80423679-80423508 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 64

Conread position: 55-217
Cow position: chr1:95976386-95976551 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 63

Conread position: 55-218
Cow position: chr1:35162463-35162626 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 102

Conread position: 55-218
Cow position: chr1:102306092-102305925 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 15

Conread position: 56-189
Cow position: chr1:1799084-1799224 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 56-212
Cow position: chr1:92578779-92578619 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 56-217
Cow position: chr1:3271199-3271368 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 77, 148

Conread position: 56-223
Cow position: chr1:1496478-1496297 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 57-218
Cow position: chr1:37470555-37470713 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 61

Conread position: 57-218
Cow position: chr1:95829078-95828915 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 123

Conread position: 58-203
Cow position: chr1:37503815-37503677 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 51

Conread position: 59-207
Cow position: chr1:39095545-39095700 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 59-209
Cow position: chr1:4391214-4391056 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 59-212
Cow position: chr1:23186742-23186586 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 74, 64

Conread position: 59-215
Cow position: chr1:50585819-50585661 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 141

Conread position: 59-223
Cow position: chr1:87220512-87220677 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 147

Conread position: 61-189
Cow position: chr1:67743677-67743546 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 61-208
Cow position: chr1:39703023-39703165 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 85, 62

Conread position: 61-220
Cow position: chr1:70175479-70175315 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 69

Conread position: 62-208
Cow position: chr1:34952303-34952450 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 35

Conread position: 64-215
Cow position: chr1:8983586-8983441 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 64-218
Cow position: chr1:79630854-79630695 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 96

Conread position: 64-236
Cow position: chr1:40212282-40212111 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 54

Conread position: 70-202
Cow position: chr1:98742085-98742221 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 48

Conread position: 70-204
Cow position: chr1:45233059-45233190 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 41

Conread position: 70-209
Cow position: chr1:11770168-11770031 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 54

Conread position: 71-217
Cow position: chr1:56618586-56618436 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 45

Conread position: 71-218
Cow position: chr1:40724665-40724813 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 72-217
Cow position: chr1:97755573-97755723 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 74-202
Cow position: chr1:61564850-61564986 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 49, 0

Conread position: 74-213
Cow position: chr1:426305-426172 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 37

Conread position: 76-210
Cow position: chr1:82538002-82538144 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 78-218
Cow position: chr1:8778259-8778116 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 45

Conread position: 87-211
Cow position: chr1:46294506-46294380 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 24

Conread position: 91-207
Cow position: chr1:83066742-83066621 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.