Cow genome map
| Conread name: | Ss1.1-Fet1-UMC-pd20fet-016-c11.3 |
| Conread position: | 19-218 |
| Cow position: | chr12:38679021-38679229 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 21-210 |
| Cow position: | chr12:37123627-37123821 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 22-189 |
| Cow position: | chr12:22485783-22485961 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 22-218 |
| Cow position: | chr12:12699667-12699458 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 24-188 |
| Cow position: | chr12:40309297-40309459 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 25-137 |
| Cow position: | chr12:19274421-19274308 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 25-210 |
| Cow position: | chr12:19261171-19261364 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 26-188 |
| Cow position: | chr12:26777212-26777047 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 26-197 |
| Cow position: | chr12:33948881-33949056 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 26-218 |
| Cow position: | chr12:7884704-7884498 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 27-154 |
| Cow position: | chr12:16434892-16434766 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 27-189 |
| Cow position: | chr12:4512470-4512303 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 27-189 |
| Cow position: | chr12:24116383-24116225 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 27-205 |
| Cow position: | chr12:48578823-48579002 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 19, 85 |
| Conread position: | 27-215 |
| Cow position: | chr12:6480620-6480815 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 12, 171 |
| Conread position: | 27-215 |
| Cow position: | chr12:7902819-7902627 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 27-217 |
| Cow position: | chr12:25805152-25804967 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 27-218 |
| Cow position: | chr12:17252218-17252026 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 27-219 |
| Cow position: | chr12:9143367-9143562 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 28-206 |
| Cow position: | chr12:36544663-36544477 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 29-205 |
| Cow position: | chr12:29057372-29057554 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 29-221 |
| Cow position: | chr12:30805838-30806031 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 29-235 |
| Cow position: | chr12:13911596-13911382 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 100 |
| Conread position: | 31-193 |
| Cow position: | chr12:5635468-5635300 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 105, 87 |
| Conread position: | 31-205 |
| Cow position: | chr12:17879316-17879141 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 31-236 |
| Cow position: | chr12:9766892-9766681 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 98, 87 |
| Conread position: | 31-237 |
| Cow position: | chr12:38774258-38774050 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 189 |
| Conread position: | 32-211 |
| Cow position: | chr12:23446706-23446892 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 97, 85 |
| Conread position: | 32-226 |
| Cow position: | chr12:583524-583318 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 33-211 |
| Cow position: | chr12:32808625-32808446 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 37-180 |
| Cow position: | chr12:4866808-4866953 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 37-188 |
| Cow position: | chr12:31517180-31517036 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 87 |
| Conread position: | 37-189 |
| Cow position: | chr12:29731305-29731459 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 37-189 |
| Cow position: | chr12:44542257-44542411 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 37-203 |
| Cow position: | chr12:20439270-20439099 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 85 |
| Conread position: | 37-205 |
| Cow position: | chr12:4594492-4594668 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 37-210 |
| Cow position: | chr12:43474751-43474927 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 37-211 |
| Cow position: | chr12:3586109-3586285 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 81 |
| Conread position: | 37-214 |
| Cow position: | chr12:36261680-36261872 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 37-214 |
| Cow position: | chr12:37514290-37514107 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 73 |
| Conread position: | 37-214 |
| Cow position: | chr12:42966986-42967168 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 37-215 |
| Cow position: | chr12:14222972-14223157 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 37-215 |
| Cow position: | chr12:18103621-18103443 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 109, 87 |
| Conread position: | 37-215 |
| Cow position: | chr12:23714666-23714845 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 108, 81 |
| Conread position: | 37-215 |
| Cow position: | chr12:24397172-24396985 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 37-215 |
| Cow position: | chr12:34161404-34161575 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 106, 84 |
| Conread position: | 37-215 |
| Cow position: | chr12:35241114-35240927 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 66 |
| Conread position: | 37-215 |
| Cow position: | chr12:45782217-45782397 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 37-219 |
| Cow position: | chr12:15089507-15089695 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 33 |
| Conread position: | 37-219 |
| Cow position: | chr12:25280511-25280324 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 134 |
| Conread position: | 37-224 |
| Cow position: | chr12:6958210-6958402 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 37-227 |
| Cow position: | chr12:30042716-30042913 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 178 |
| Conread position: | 37-227 |
| Cow position: | chr12:36790821-36790630 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 157 |
| Conread position: | 37-236 |
| Cow position: | chr12:42285961-42286166 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 106, 92 |
| Conread position: | 38-225 |
| Cow position: | chr12:37770862-37771049 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 74, 123 |
| Conread position: | 39-213 |
| Cow position: | chr12:5554341-5554165 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 97, 79 |
| Conread position: | 40-165 |
| Cow position: | chr12:22859458-22859583 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 13 |
| Conread position: | 40-188 |
| Cow position: | chr12:14986740-14986894 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 40-189 |
| Cow position: | chr12:6465519-6465377 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 105, 52 |
| Conread position: | 40-189 |
| Cow position: | chr12:15122317-15122473 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 40-206 |
| Cow position: | chr12:22047915-22048089 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 40-208 |
| Cow position: | chr12:42181138-42180960 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 40-209 |
| Cow position: | chr12:12232874-12233050 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 40-210 |
| Cow position: | chr12:18518664-18518840 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 162 |
| Conread position: | 40-212 |
| Cow position: | chr12:41159581-41159758 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 82, 135 |
| Conread position: | 40-213 |
| Cow position: | chr12:18583001-18582822 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 40-213 |
| Cow position: | chr12:30210474-30210639 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 40-214 |
| Cow position: | chr12:25528569-25528386 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 142 |
| Conread position: | 40-215 |
| Cow position: | chr12:5839665-5839486 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 40-215 |
| Cow position: | chr12:18123660-18123844 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 40-215 |
| Cow position: | chr12:35368633-35368818 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 40-215 |
| Cow position: | chr12:37169955-37169775 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 40-217 |
| Cow position: | chr12:24166953-24166774 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 40-217 |
| Cow position: | chr12:29180666-29180852 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 183 |
| Conread position: | 40-218 |
| Cow position: | chr12:4719938-4720121 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 40-218 |
| Cow position: | chr12:11836225-11836412 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 12, 124 |
| Conread position: | 40-218 |
| Cow position: | chr12:24032487-24032665 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 40-220 |
| Cow position: | chr12:15703506-15703319 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 137 |
| Conread position: | 40-221 |
| Cow position: | chr12:2964041-2964229 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 78 |
| Conread position: | 40-221 |
| Cow position: | chr12:30745707-30745892 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 159 |
| Conread position: | 40-224 |
| Cow position: | chr12:40881919-40881737 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 106, 21 |
| Conread position: | 40-240 |
| Cow position: | chr12:20776930-20776733 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 41-189 |
| Cow position: | chr12:41221017-41220865 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 41-209 |
| Cow position: | chr12:20479343-20479171 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 79, 124 |
| Conread position: | 41-235 |
| Cow position: | chr12:20654483-20654282 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 75 |
| Conread position: | 42-189 |
| Cow position: | chr12:36241390-36241239 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 42-202 |
| Cow position: | chr12:44822289-44822443 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 12 |
| Conread position: | 42-222 |
| Cow position: | chr12:42951691-42951510 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 81, 11 |
| Conread position: | 42-243 |
| Cow position: | chr12:8710978-8711188 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 44-189 |
| Cow position: | chr12:6666568-6666709 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 102, 80 |
| Conread position: | 44-189 |
| Cow position: | chr12:15389069-15389218 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 44-189 |
| Cow position: | chr12:31532406-31532261 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 76, 130 |
| Conread position: | 44-203 |
| Cow position: | chr12:31841567-31841732 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 44-206 |
| Cow position: | chr12:11056873-11057031 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 73 |
| Conread position: | 44-210 |
| Cow position: | chr12:11272828-11272660 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 44-214 |
| Cow position: | chr12:2734910-2734738 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 44-214 |
| Cow position: | chr12:15429598-15429418 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 44-215 |
| Cow position: | chr12:6206329-6206508 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 62, 26 |
| Conread position: | 44-215 |
| Cow position: | chr12:17702031-17701862 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 44-217 |
| Cow position: | chr12:43974287-43974471 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 44-218 |
| Cow position: | chr12:17269800-17269979 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 44-218 |
| Cow position: | chr12:18978686-18978863 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 9 |
| Conread position: | 44-218 |
| Cow position: | chr12:33129252-33129435 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 44-218 |
| Cow position: | chr12:41684505-41684686 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 44-223 |
| Cow position: | chr12:30590765-30590949 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 79, 167 |
| Conread position: | 44-235 |
| Cow position: | chr12:43854891-43855081 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 157 |
| Conread position: | 46-196 |
| Cow position: | chr12:24181147-24181298 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 50-188 |
| Cow position: | chr12:44892212-44892356 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 7 |
| Conread position: | 52-212 |
| Cow position: | chr12:29358057-29357894 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 53-183 |
| Cow position: | chr12:17744857-17744722 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 53-189 |
| Cow position: | chr12:30194708-30194841 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 53-189 |
| Cow position: | chr12:38552201-38552341 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 53-189 |
| Cow position: | chr12:40158016-40157880 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 53-189 |
| Cow position: | chr12:44861253-44861109 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 53-189 |
| Cow position: | chr12:45092453-45092588 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 53-191 |
| Cow position: | chr12:3623701-3623841 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 53-207 |
| Cow position: | chr12:9482298-9482136 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 53-207 |
| Cow position: | chr12:17881868-17882021 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 53-208 |
| Cow position: | chr12:33976206-33976370 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 53-215 |
| Cow position: | chr12:14396778-14396617 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 53-215 |
| Cow position: | chr12:35469440-35469276 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 48 |
| Conread position: | 53-215 |
| Cow position: | chr12:45126839-45126686 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 53-216 |
| Cow position: | chr12:48415509-48415345 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 112 |
| Conread position: | 53-217 |
| Cow position: | chr12:17490222-17490394 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 53-218 |
| Cow position: | chr12:2835410-2835585 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 53-221 |
| Cow position: | chr12:31602815-31602637 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 53-221 |
| Cow position: | chr12:38032133-38031963 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 53-240 |
| Cow position: | chr12:33851364-33851557 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 54-189 |
| Cow position: | chr12:1952794-1952657 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 54-203 |
| Cow position: | chr12:37008699-37008548 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 54-205 |
| Cow position: | chr12:4768933-4769085 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 54-213 |
| Cow position: | chr12:20637528-20637367 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 54-215 |
| Cow position: | chr12:1333239-1333391 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 53 |
| Conread position: | 54-215 |
| Cow position: | chr12:6754204-6754366 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 92, 64 |
| Conread position: | 54-215 |
| Cow position: | chr12:25561377-25561543 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 54-218 |
| Cow position: | chr12:26945827-26945662 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 68, 117 |
| Conread position: | 54-218 |
| Cow position: | chr12:39150044-39149872 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 47 |
| Conread position: | 54-220 |
| Cow position: | chr12:4109051-4109225 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 168 |
| Conread position: | 55-191 |
| Cow position: | chr12:24437626-24437482 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 55-210 |
| Cow position: | chr12:17031624-17031780 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 55-215 |
| Cow position: | chr12:13995789-13995620 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 55-216 |
| Cow position: | chr12:3371537-3371374 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 58, 124 |
| Conread position: | 55-216 |
| Cow position: | chr12:42561910-42562072 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 68, 115 |
| Conread position: | 55-225 |
| Cow position: | chr12:42784321-42784496 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 59-185 |
| Cow position: | chr12:39437260-39437133 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 59-189 |
| Cow position: | chr12:26575909-26576040 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 60-189 |
| Cow position: | chr12:26217810-26217679 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 106 |
| Conread position: | 62-218 |
| Cow position: | chr12:19056688-19056860 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 65-183 |
| Cow position: | chr12:17622400-17622284 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 57 |
| Conread position: | 70-214 |
| Cow position: | chr12:15151845-15151698 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 70-215 |
| Cow position: | chr12:46106811-46106968 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 70-236 |
| Cow position: | chr12:38165517-38165350 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 126 |
| Conread position: | 71-215 |
| Cow position: | chr12:40910260-40910109 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 75-189 |
| Cow position: | chr12:18513888-18513778 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 43 |
| Conread position: | 75-211 |
| Cow position: | chr12:3579513-3579653 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 77-204 |
| Cow position: | chr12:18551166-18551298 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.