Cow genome map

Conread name: Ss1.1-Fet1-UMC-pd20fet-016-c11.3

Conread position: 20-215
Cow position: chr17:3387766-3387972 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 95

Conread position: 20-218
Cow position: chr17:18720394-18720197 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 31, 35

Conread position: 22-218
Cow position: chr17:36468136-36467932 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 80

Conread position: 25-205
Cow position: chr17:32471726-32471544 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 12

Conread position: 25-215
Cow position: chr17:21466208-21466005 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 18, 12

Conread position: 26-166
Cow position: chr17:9713286-9713145 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 95

Conread position: 26-200
Cow position: chr17:23101163-23100984 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 11

Conread position: 26-204
Cow position: chr17:24587680-24587865 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 95

Conread position: 26-205
Cow position: chr17:20836150-20836338 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 27

Conread position: 26-209
Cow position: chr17:22051534-22051344 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 11

Conread position: 26-211
Cow position: chr17:1634436-1634247 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 95

Conread position: 26-218
Cow position: chr17:20848581-20848777 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 174

Conread position: 26-220
Cow position: chr17:40276796-40276994 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 11

Conread position: 26-249
Cow position: chr17:39606486-39606715 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 93

Conread position: 27-173
Cow position: chr17:25348427-25348578 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 27-188
Cow position: chr17:18818627-18818788 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 27-191
Cow position: chr17:21114895-21114726 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 92

Conread position: 27-198
Cow position: chr17:20072040-20071862 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 125

Conread position: 27-201
Cow position: chr17:9697623-9697445 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 150

Conread position: 27-203
Cow position: chr17:33933686-33933507 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 86

Conread position: 27-206
Cow position: chr17:5423010-5422834 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 92

Conread position: 27-211
Cow position: chr17:1025766-1025586 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 91

Conread position: 27-211
Cow position: chr17:8815251-8815439 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 11

Conread position: 27-211
Cow position: chr17:32333032-32332838 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 27-214
Cow position: chr17:15102835-15102632 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 27-214
Cow position: chr17:32989535-32989727 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 12, 92

Conread position: 27-216
Cow position: chr17:10016338-10016533 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 56

Conread position: 27-216
Cow position: chr17:15684570-15684757 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 28

Conread position: 27-217
Cow position: chr17:30713404-30713600 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 12, 59

Conread position: 27-218
Cow position: chr17:32993565-32993372 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 92

Conread position: 28-189
Cow position: chr17:10414559-10414720 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 122, 95

Conread position: 29-218
Cow position: chr17:19544170-19543974 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 33, 55

Conread position: 29-218
Cow position: chr17:21959624-21959427 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 11

Conread position: 29-220
Cow position: chr17:3364653-3364852 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 25

Conread position: 30-218
Cow position: chr17:32027389-32027191 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 31-211
Cow position: chr17:27795718-27795904 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 93, 59

Conread position: 31-214
Cow position: chr17:6318039-6317856 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 93

Conread position: 31-215
Cow position: chr17:7571167-7571360 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 31-215
Cow position: chr17:25122180-25121994 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 137

Conread position: 32-137
Cow position: chr17:24789885-24789991 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 81

Conread position: 32-173
Cow position: chr17:18473228-18473374 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 72

Conread position: 32-210
Cow position: chr17:21718933-21718746 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 32-218
Cow position: chr17:33155093-33154899 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 33-209
Cow position: chr17:25473214-25473035 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 172

Conread position: 36-219
Cow position: chr17:30728572-30728767 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 37-183
Cow position: chr17:40852040-40852189 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 83

Conread position: 37-188
Cow position: chr17:24862528-24862681 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 37-188
Cow position: chr17:29245513-29245660 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 81

Conread position: 37-189
Cow position: chr17:25511315-25511469 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 95, 25

Conread position: 37-189
Cow position: chr17:26789489-26789642 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 81

Conread position: 37-197
Cow position: chr17:31037307-31037142 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 150

Conread position: 37-202
Cow position: chr17:25585251-25585420 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 89

Conread position: 37-203
Cow position: chr17:14025841-14025665 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 37-204
Cow position: chr17:22189505-22189673 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 37-207
Cow position: chr17:11056090-11055922 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 43

Conread position: 37-209
Cow position: chr17:40355328-40355507 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 159

Conread position: 37-210
Cow position: chr17:9078151-9077963 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 37-210
Cow position: chr17:15355001-15355187 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 37-210
Cow position: chr17:25875465-25875643 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 64

Conread position: 37-211
Cow position: chr17:7959251-7959430 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 44

Conread position: 37-211
Cow position: chr17:12306327-12306152 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 160

Conread position: 37-211
Cow position: chr17:19471701-19471523 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 37-218
Cow position: chr17:21236592-21236781 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 37-219
Cow position: chr17:34860448-34860629 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 64

Conread position: 37-224
Cow position: chr17:12200863-12201054 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 79

Conread position: 37-229
Cow position: chr17:17035015-17035213 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 6, 118

Conread position: 37-235
Cow position: chr17:25612160-25612359 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 81

Conread position: 37-240
Cow position: chr17:25587386-25587184 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 13

Conread position: 38-189
Cow position: chr17:11962462-11962307 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 32

Conread position: 38-196
Cow position: chr17:24163104-24163268 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 83

Conread position: 38-209
Cow position: chr17:9770574-9770752 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 38-214
Cow position: chr17:32978862-32978680 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 38-218
Cow position: chr17:40771903-40772087 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 41

Conread position: 39-186
Cow position: chr17:24757596-24757747 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 31

Conread position: 39-214
Cow position: chr17:24987275-24987456 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 39-216
Cow position: chr17:12215185-12215002 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 174

Conread position: 39-218
Cow position: chr17:17782127-17782311 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 87, 140

Conread position: 39-220
Cow position: chr17:33793235-33793415 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 105, 79

Conread position: 40-165
Cow position: chr17:27303899-27303768 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 40-186
Cow position: chr17:18776117-18775965 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 86

Conread position: 40-188
Cow position: chr17:5372457-5372306 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 81

Conread position: 40-189
Cow position: chr17:946427-946583 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 80

Conread position: 40-189
Cow position: chr17:10825550-10825703 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 81

Conread position: 40-189
Cow position: chr17:36330887-36330740 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 64

Conread position: 40-196
Cow position: chr17:5027390-5027230 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 40-198
Cow position: chr17:27440246-27440413 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 40-205
Cow position: chr17:12019475-12019316 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 41

Conread position: 40-205
Cow position: chr17:20932401-20932572 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 128

Conread position: 40-205
Cow position: chr17:25514053-25513872 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 40-206
Cow position: chr17:13243975-13243809 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 104, 12

Conread position: 40-207
Cow position: chr17:4286116-4286279 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 40-208
Cow position: chr17:23257628-23257464 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 16

Conread position: 40-209
Cow position: chr17:17059493-17059665 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 80

Conread position: 40-209
Cow position: chr17:33164746-33164573 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 40-210
Cow position: chr17:5038981-5038804 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 119

Conread position: 40-210
Cow position: chr17:21181521-21181702 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 64

Conread position: 40-210
Cow position: chr17:26225097-26225282 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 40-211
Cow position: chr17:18934330-18934504 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 13, 141

Conread position: 40-211
Cow position: chr17:21003756-21003582 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 74, 46

Conread position: 40-211
Cow position: chr17:42150461-42150640 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 40-213
Cow position: chr17:29084244-29084422 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 93

Conread position: 40-213
Cow position: chr17:35043854-35043678 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 80

Conread position: 40-214
Cow position: chr17:28982251-28982433 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 40-214
Cow position: chr17:29995366-29995183 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 40-215
Cow position: chr17:12536395-12536225 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 81

Conread position: 40-215
Cow position: chr17:17044262-17044078 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 65

Conread position: 40-217
Cow position: chr17:21039627-21039814 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 14, 81

Conread position: 40-218
Cow position: chr17:1469449-1469622 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 106, 19

Conread position: 40-218
Cow position: chr17:32349141-32349318 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 12

Conread position: 40-221
Cow position: chr17:25345541-25345732 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 165

Conread position: 40-226
Cow position: chr17:29292310-29292129 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 84

Conread position: 40-249
Cow position: chr17:11921095-11920873 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 13, 172

Conread position: 40-262
Cow position: chr17:10508364-10508132 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 148

Conread position: 41-170
Cow position: chr17:5767978-5768107 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 30

Conread position: 41-189
Cow position: chr17:21910458-21910304 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 41-189
Cow position: chr17:43717264-43717113 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 142

Conread position: 41-203
Cow position: chr17:1562713-1562550 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 104, 0

Conread position: 41-203
Cow position: chr17:27429639-27429797 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 41-204
Cow position: chr17:11148170-11148330 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 100

Conread position: 41-206
Cow position: chr17:41380437-41380273 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 89, 25

Conread position: 41-211
Cow position: chr17:24077474-24077643 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 104

Conread position: 41-216
Cow position: chr17:21678085-21677907 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 78

Conread position: 41-236
Cow position: chr17:13922554-13922755 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 85

Conread position: 42-189
Cow position: chr17:27922645-27922494 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 42-218
Cow position: chr17:28468195-28468380 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 42-219
Cow position: chr17:25342665-25342480 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 11

Conread position: 43-203
Cow position: chr17:15333603-15333440 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 43-211
Cow position: chr17:15103664-15103493 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 74

Conread position: 43-217
Cow position: chr17:35276365-35276195 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 76

Conread position: 43-228
Cow position: chr17:42259291-42259469 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 152, 75

Conread position: 44-189
Cow position: chr17:7711514-7711663 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 44-189
Cow position: chr17:38736515-38736658 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 102, 80

Conread position: 44-206
Cow position: chr17:30108516-30108674 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 59

Conread position: 44-208
Cow position: chr17:908817-908985 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 74

Conread position: 44-210
Cow position: chr17:9932223-9932059 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 102, 74

Conread position: 44-215
Cow position: chr17:30977097-30977274 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 79, 168

Conread position: 44-218
Cow position: chr17:20881732-20881559 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 85, 74

Conread position: 44-234
Cow position: chr17:25800804-25800613 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 87, 47

Conread position: 44-237
Cow position: chr17:33275673-33275485 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 102, 73

Conread position: 44-267
Cow position: chr17:12289332-12289102 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 179

Conread position: 44-273
Cow position: chr17:1463254-1463021 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 169

Conread position: 45-215
Cow position: chr17:24895151-24895336 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 47-199
Cow position: chr17:32008472-32008316 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 42

Conread position: 50-204
Cow position: chr17:26575140-26574980 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 52-203
Cow position: chr17:29356155-29356002 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 66

Conread position: 53-185
Cow position: chr17:11912417-11912282 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 53-188
Cow position: chr17:8137491-8137628 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 64

Conread position: 53-188
Cow position: chr17:20022428-20022288 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 53-189
Cow position: chr17:20199264-20199126 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 62

Conread position: 53-189
Cow position: chr17:24773765-24773903 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 65

Conread position: 53-189
Cow position: chr17:24786934-24786798 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 17

Conread position: 53-197
Cow position: chr17:12959192-12959338 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 65

Conread position: 53-203
Cow position: chr17:11832029-11831872 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 53-206
Cow position: chr17:25128267-25128105 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 53-207
Cow position: chr17:14003911-14004069 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 65

Conread position: 53-209
Cow position: chr17:44234336-44234491 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 65

Conread position: 53-210
Cow position: chr17:20359198-20359364 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 53-211
Cow position: chr17:12325679-12325522 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 64

Conread position: 53-215
Cow position: chr17:243218-243374 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 53-215
Cow position: chr17:20929327-20929500 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 53-215
Cow position: chr17:25126436-25126597 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 93, 53

Conread position: 53-215
Cow position: chr17:25616335-25616501 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 92, 57

Conread position: 53-215
Cow position: chr17:32419030-32418860 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 76, 65

Conread position: 53-218
Cow position: chr17:3467838-3468007 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 53-218
Cow position: chr17:6761762-6761598 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 44

Conread position: 53-218
Cow position: chr17:27606603-27606772 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 64

Conread position: 53-218
Cow position: chr17:36814447-36814622 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 53-218
Cow position: chr17:39963963-39964134 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 45

Conread position: 53-219
Cow position: chr17:24824328-24824507 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 166

Conread position: 53-220
Cow position: chr17:43323459-43323284 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 150

Conread position: 53-221
Cow position: chr17:40412669-40412836 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 153

Conread position: 53-223
Cow position: chr17:7803089-7802911 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 174

Conread position: 53-230
Cow position: chr17:20913196-20913376 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 13

Conread position: 53-236
Cow position: chr17:39759204-39759381 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 92, 49

Conread position: 53-243
Cow position: chr17:36791212-36791405 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 70, 127

Conread position: 53-244
Cow position: chr17:42419795-42419985 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 125

Conread position: 54-189
Cow position: chr17:17822177-17822314 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 40

Conread position: 54-203
Cow position: chr17:35457728-35457577 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 51

Conread position: 54-204
Cow position: chr17:21676977-21677133 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 54-205
Cow position: chr17:12963520-12963372 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 41

Conread position: 54-210
Cow position: chr17:9824756-9824919 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 54-210
Cow position: chr17:35051701-35051867 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 158

Conread position: 54-211
Cow position: chr17:20110403-20110563 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 70

Conread position: 54-214
Cow position: chr17:22128009-22128179 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 64

Conread position: 54-215
Cow position: chr17:30501728-30501557 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 129

Conread position: 54-217
Cow position: chr17:15883758-15883930 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 54-218
Cow position: chr17:9260525-9260352 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 68, 0

Conread position: 54-218
Cow position: chr17:24898287-24898461 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 55-186
Cow position: chr17:36864718-36864847 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 91, 69

Conread position: 55-221
Cow position: chr17:34790976-34790800 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 74, 63

Conread position: 56-223
Cow position: chr17:45135819-45135649 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 61

Conread position: 57-202
Cow position: chr17:33271573-33271430 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 22

Conread position: 57-217
Cow position: chr17:43315198-43315035 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 63, 13

Conread position: 58-235
Cow position: chr17:10037498-10037682 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 180

Conread position: 59-219
Cow position: chr17:20157699-20157863 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 142

Conread position: 61-211
Cow position: chr17:6318773-6318613 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 56

Conread position: 61-211
Cow position: chr17:18673946-18673788 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 61-231
Cow position: chr17:831705-831530 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 57

Conread position: 62-213
Cow position: chr17:8809410-8809256 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 62-235
Cow position: chr17:12946257-12946089 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 61

Conread position: 69-219
Cow position: chr17:10820883-10820731 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 70-209
Cow position: chr17:24612753-24612891 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 48

Conread position: 70-214
Cow position: chr17:20783091-20782944 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 48

Conread position: 70-219
Cow position: chr17:22223818-22223970 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 129

Conread position: 71-209
Cow position: chr17:24974049-24974190 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 72-188
Cow position: chr17:2729813-2729691 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 72-189
Cow position: chr17:13478491-13478377 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 55

Show alignments to all cow chromosomes.