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Cow genome map

           
Conread name:
           
Ss1.1-Fet1-UMC-pd20fet-016-c11.3
        

               
Conread position:
               
5-199
               

               
Cow position:
               
chr21:40930420-40930216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
21-203
               

               
Cow position:
               
chr21:438639-438820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
21-217
               

               
Cow position:
               
chr21:28882257-28882460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 188
               

               
Conread position:
               
22-189
               

               
Cow position:
               
chr21:37495868-37495694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
22-205
               

               
Cow position:
               
chr21:30592231-30592048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
24-187
               

               
Cow position:
               
chr21:31691562-31691720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
25-156
               

               
Cow position:
               
chr21:11057800-11057670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
25-211
               

               
Cow position:
               
chr21:17856846-17857036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
25-211
               

               
Cow position:
               
chr21:34654151-34654345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
25-213
               

               
Cow position:
               
chr21:24858393-24858589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
25-215
               

               
Cow position:
               
chr21:39393826-39394030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
26-158
               

               
Cow position:
               
chr21:19360097-19359963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
26-189
               

               
Cow position:
               
chr21:32559286-32559121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
26-203
               

               
Cow position:
               
chr21:17252899-17252712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr21:641669-641854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr21:802238-802055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr21:21940323-21940142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
26-212
               

               
Cow position:
               
chr21:30938588-30938393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
26-214
               

               
Cow position:
               
chr21:8426525-8426717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
26-217
               

               
Cow position:
               
chr21:30657949-30658142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
27-189
               

               
Cow position:
               
chr21:11644884-11644716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
27-211
               

               
Cow position:
               
chr21:46463661-46463843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
27-218
               

               
Cow position:
               
chr21:47719217-47719021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
28-210
               

               
Cow position:
               
chr21:12473975-12473791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
28-213
               

               
Cow position:
               
chr21:27567978-27568165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
28-217
               

               
Cow position:
               
chr21:6291830-6292026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
89, 181
               

               
Conread position:
               
28-226
               

               
Cow position:
               
chr21:24757025-24757231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
31-191
               

               
Cow position:
               
chr21:42135529-42135367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
31-207
               

               
Cow position:
               
chr21:18568552-18568369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
31-207
               

               
Cow position:
               
chr21:40134244-40134414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
32-215
               

               
Cow position:
               
chr21:46451867-46451693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
35-224
               

               
Cow position:
               
chr21:41140627-41140430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
37-165
               

               
Cow position:
               
chr21:7768531-7768661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
37-189
               

               
Cow position:
               
chr21:20160769-20160928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
85, 142
               

               
Conread position:
               
37-202
               

               
Cow position:
               
chr21:15271344-15271171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
37-203
               

               
Cow position:
               
chr21:13883574-13883746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
37-205
               

               
Cow position:
               
chr21:10264126-10264301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
37-206
               

               
Cow position:
               
chr21:22851013-22851182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
37-209
               

               
Cow position:
               
chr21:4281782-4281614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
37-209
               

               
Cow position:
               
chr21:11678219-11678050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
107, 80
               

               
Conread position:
               
37-211
               

               
Cow position:
               
chr21:12461874-12461697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
37-211
               

               
Cow position:
               
chr21:40266214-40266396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
37-212
               

               
Cow position:
               
chr21:29658369-29658547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
37-212
               

               
Cow position:
               
chr21:32339647-32339473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
110, 86
               

               
Conread position:
               
37-213
               

               
Cow position:
               
chr21:23586975-23587149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
158, 62
               

               
Conread position:
               
37-215
               

               
Cow position:
               
chr21:28244563-28244742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
96, 86
               

               
Conread position:
               
37-215
               

               
Cow position:
               
chr21:40475591-40475777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
37-216
               

               
Cow position:
               
chr21:10673214-10673386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
37-217
               

               
Cow position:
               
chr21:21615875-21616048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
37-219
               

               
Cow position:
               
chr21:27744118-27744316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
37-219
               

               
Cow position:
               
chr21:40059123-40059303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
37-224
               

               
Cow position:
               
chr21:1464436-1464633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
37-229
               

               
Cow position:
               
chr21:38900867-38901052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
37-231
               

               
Cow position:
               
chr21:868831-868626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 168
               

               
Conread position:
               
38-164
               

               
Cow position:
               
chr21:13043930-13043800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
38-189
               

               
Cow position:
               
chr21:16120066-16119912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 5
               

               
Conread position:
               
38-204
               

               
Cow position:
               
chr21:31462655-31462822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
38-210
               

               
Cow position:
               
chr21:21907340-21907170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 78
               

               
Conread position:
               
38-215
               

               
Cow position:
               
chr21:47713914-47713730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
92, 59
               

               
Conread position:
               
39-209
               

               
Cow position:
               
chr21:6041879-6042058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 79
               

               
Conread position:
               
40-137
               

               
Cow position:
               
chr21:30980484-30980386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
40-187
               

               
Cow position:
               
chr21:24598752-24598891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
40-188
               

               
Cow position:
               
chr21:24797750-24797904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr21:8349424-8349572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr21:11353153-11353314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr21:14760658-14760807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr21:22121602-22121752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
40-189
               

               
Cow position:
               
chr21:41287700-41287546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
40-191
               

               
Cow position:
               
chr21:5464841-5464999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
40-200
               

               
Cow position:
               
chr21:7460700-7460866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
40-202
               

               
Cow position:
               
chr21:7673216-7673376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 78
               

               
Conread position:
               
40-204
               

               
Cow position:
               
chr21:643417-643591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
40-204
               

               
Cow position:
               
chr21:11182646-11182814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
40-205
               

               
Cow position:
               
chr21:48482437-48482266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
40-207
               

               
Cow position:
               
chr21:15012532-15012702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
40-207
               

               
Cow position:
               
chr21:40291654-40291480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
40-208
               

               
Cow position:
               
chr21:10004792-10004614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
40-208
               

               
Cow position:
               
chr21:16498612-16498783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 78
               

               
Conread position:
               
40-209
               

               
Cow position:
               
chr21:5898309-5898140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
40-209
               

               
Cow position:
               
chr21:38449352-38449183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
40-210
               

               
Cow position:
               
chr21:25012175-25012348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
40-210
               

               
Cow position:
               
chr21:26828878-26828700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
40-210
               

               
Cow position:
               
chr21:44251750-44251570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
40-211
               

               
Cow position:
               
chr21:8506453-8506277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 158
               

               
Conread position:
               
40-211
               

               
Cow position:
               
chr21:8509341-8509165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
14, 158
               

               
Conread position:
               
40-211
               

               
Cow position:
               
chr21:27229698-27229531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
40-211
               

               
Cow position:
               
chr21:27810483-27810664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
40-214
               

               
Cow position:
               
chr21:6998040-6998216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
40-216
               

               
Cow position:
               
chr21:18056033-18055850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
40-220
               

               
Cow position:
               
chr21:28030382-28030562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
40-221
               

               
Cow position:
               
chr21:45376044-45376226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
40-229
               

               
Cow position:
               
chr21:33982714-33982523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
40-230
               

               
Cow position:
               
chr21:44658663-44658850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 78
               

               
Conread position:
               
40-275
               

               
Cow position:
               
chr21:30222438-30222676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 191
               

               
Conread position:
               
41-189
               

               
Cow position:
               
chr21:2785396-2785251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
105, 82
               

               
Conread position:
               
41-189
               

               
Cow position:
               
chr21:29418662-29418821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
41-203
               

               
Cow position:
               
chr21:26735499-26735661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
41-208
               

               
Cow position:
               
chr21:25014936-25014767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
41-210
               

               
Cow position:
               
chr21:1511383-1511560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
41-211
               

               
Cow position:
               
chr21:37706318-37706139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
41-216
               

               
Cow position:
               
chr21:44732949-44732766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
41-218
               

               
Cow position:
               
chr21:6051597-6051783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 164
               

               
Conread position:
               
41-218
               

               
Cow position:
               
chr21:29011876-29011696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
41-221
               

               
Cow position:
               
chr21:23672839-23673025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 130
               

               
Conread position:
               
41-235
               

               
Cow position:
               
chr21:11740025-11739821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
43-215
               

               
Cow position:
               
chr21:34010300-34010118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
44-189
               

               
Cow position:
               
chr21:8351193-8351044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
44-189
               

               
Cow position:
               
chr21:8359125-8358979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 135
               

               
Conread position:
               
44-200
               

               
Cow position:
               
chr21:24875453-24875613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
44-203
               

               
Cow position:
               
chr21:21158911-21159068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
102, 80
               

               
Conread position:
               
44-205
               

               
Cow position:
               
chr21:40820753-40820584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
44-209
               

               
Cow position:
               
chr21:39403425-39403254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
44-210
               

               
Cow position:
               
chr21:15869790-15869957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
44-210
               

               
Cow position:
               
chr21:38918298-38918473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
44-213
               

               
Cow position:
               
chr21:31659051-31658875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
44-213
               

               
Cow position:
               
chr21:36508334-36508504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 134
               

               
Conread position:
               
44-215
               

               
Cow position:
               
chr21:44565621-44565452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
160, 9
               

               
Conread position:
               
44-219
               

               
Cow position:
               
chr21:36682425-36682609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
95, 73
               

               
Conread position:
               
44-220
               

               
Cow position:
               
chr21:82167-82341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 74
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr21:29978660-29978473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
44-231
               

               
Cow position:
               
chr21:27677580-27677775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 185
               

               
Conread position:
               
44-239
               

               
Cow position:
               
chr21:48334692-48334476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
47-189
               

               
Cow position:
               
chr21:31258569-31258719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
50-188
               

               
Cow position:
               
chr21:3360909-3360767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
53-185
               

               
Cow position:
               
chr21:7424905-7424767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
53-186
               

               
Cow position:
               
chr21:36398454-36398321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
53-188
               

               
Cow position:
               
chr21:47465009-47464870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
53-189
               

               
Cow position:
               
chr21:3379643-3379503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
53-189
               

               
Cow position:
               
chr21:32536505-32536641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
53-189
               

               
Cow position:
               
chr21:36763170-36763312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
53-203
               

               
Cow position:
               
chr21:43655811-43655966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
53-205
               

               
Cow position:
               
chr21:19868846-19868696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
53-205
               

               
Cow position:
               
chr21:28907438-28907283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
53-208
               

               
Cow position:
               
chr21:742386-742546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
53-210
               

               
Cow position:
               
chr21:27521230-27521071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
69, 5
               

               
Conread position:
               
53-211
               

               
Cow position:
               
chr21:14126386-14126543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
53-211
               

               
Cow position:
               
chr21:20163817-20163979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
69, 111
               

               
Conread position:
               
53-211
               

               
Cow position:
               
chr21:21145506-21145660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
53-213
               

               
Cow position:
               
chr21:71696-71863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
53-214
               

               
Cow position:
               
chr21:30970044-30970208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
53-215
               

               
Cow position:
               
chr21:6851281-6851442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
53-215
               

               
Cow position:
               
chr21:38482488-38482658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
53-216
               

               
Cow position:
               
chr21:745284-745449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
53-216
               

               
Cow position:
               
chr21:7208661-7208499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
53-216
               

               
Cow position:
               
chr21:41590456-41590286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
53-218
               

               
Cow position:
               
chr21:5218818-5218985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 152
               

               
Conread position:
               
53-218
               

               
Cow position:
               
chr21:44724259-44724094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
53-218
               

               
Cow position:
               
chr21:44861394-44861236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
53-218
               

               
Cow position:
               
chr21:45537293-45537469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
53-219
               

               
Cow position:
               
chr21:16796960-16797131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
71, 130
               

               
Conread position:
               
53-219
               

               
Cow position:
               
chr21:18495330-18495496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
53-221
               

               
Cow position:
               
chr21:45971065-45970897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
53-232
               

               
Cow position:
               
chr21:8558366-8558183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
53-234
               

               
Cow position:
               
chr21:27863404-27863224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
53-236
               

               
Cow position:
               
chr21:5214457-5214649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 178
               

               
Conread position:
               
54-156
               

               
Cow position:
               
chr21:45329840-45329737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
54-210
               

               
Cow position:
               
chr21:5344988-5345152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
54-210
               

               
Cow position:
               
chr21:31279366-31279528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 148
               

               
Conread position:
               
54-214
               

               
Cow position:
               
chr21:20174428-20174590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
54-225
               

               
Cow position:
               
chr21:28733803-28733634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 134
               

               
Conread position:
               
54-225
               

               
Cow position:
               
chr21:46849018-46848845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
55-193
               

               
Cow position:
               
chr21:30848830-30848694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 63
               

               
Conread position:
               
55-217
               

               
Cow position:
               
chr21:6713412-6713246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 144
               

               
Conread position:
               
57-206
               

               
Cow position:
               
chr21:28604204-28604355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 83
               

               
Conread position:
               
57-218
               

               
Cow position:
               
chr21:15544116-15543962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
57-218
               

               
Cow position:
               
chr21:19340119-19339951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
58-191
               

               
Cow position:
               
chr21:40916597-40916733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
59-205
               

               
Cow position:
               
chr21:9314920-9315069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
61-188
               

               
Cow position:
               
chr21:37110788-37110915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
62-218
               

               
Cow position:
               
chr21:12339741-12339901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
64-210
               

               
Cow position:
               
chr21:46609884-46609727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
67-230
               

               
Cow position:
               
chr21:42227576-42227406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
70-219
               

               
Cow position:
               
chr21:42341812-42341661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
71-224
               

               
Cow position:
               
chr21:30977136-30976980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
72-189
               

               
Cow position:
               
chr21:3236638-3236753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
74-193
               

               
Cow position:
               
chr21:1295859-1295978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
76-215
               

               
Cow position:
               
chr21:30359215-30359074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
79-211
               

               
Cow position:
               
chr21:7394510-7394640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
81-219
               

               
Cow position:
               
chr21:35337786-35337646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 103
               

               
Conread position:
               
84-202
               

               
Cow position:
               
chr21:674813-674931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 39
               
Show alignments to all cow chromosomes.