Cow genome map
| Conread name: | Ss1.1-Fet1-UMC-pd20fet-016-c11.3 |
| Conread position: | 9-210 |
| Cow position: | chr27:27648366-27648566 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 114, 10 |
| Conread position: | 10-215 |
| Cow position: | chr27:30884985-30884768 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 204 |
| Conread position: | 20-215 |
| Cow position: | chr27:10581478-10581275 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 20-219 |
| Cow position: | chr27:26984106-26983903 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 21-189 |
| Cow position: | chr27:21951037-21951210 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 21-218 |
| Cow position: | chr27:21419247-21419444 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 21-218 |
| Cow position: | chr27:29961635-29961837 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 23-219 |
| Cow position: | chr27:25382210-25382402 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 123, 95 |
| Conread position: | 24-210 |
| Cow position: | chr27:19557327-19557143 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 112, 29 |
| Conread position: | 25-188 |
| Cow position: | chr27:20897083-20897249 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 111, 28 |
| Conread position: | 25-209 |
| Cow position: | chr27:22171239-22171053 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 26-163 |
| Cow position: | chr27:4720174-4720312 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 26-189 |
| Cow position: | chr27:1636997-1637156 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 92 |
| Conread position: | 26-206 |
| Cow position: | chr27:19508954-19508765 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 26-211 |
| Cow position: | chr27:19576382-19576577 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 26-215 |
| Cow position: | chr27:17397513-17397710 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 26-218 |
| Cow position: | chr27:2949386-2949576 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 28, 46 |
| Conread position: | 26-231 |
| Cow position: | chr27:23232854-23232641 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 77, 71 |
| Conread position: | 27-189 |
| Cow position: | chr27:7412331-7412164 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 27-203 |
| Cow position: | chr27:4413882-4414061 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 91 |
| Conread position: | 27-208 |
| Cow position: | chr27:426907-426721 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 27-214 |
| Cow position: | chr27:16284413-16284232 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 27-214 |
| Cow position: | chr27:31210485-31210292 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 107, 70 |
| Conread position: | 27-215 |
| Cow position: | chr27:18435195-18435385 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 177 |
| Conread position: | 27-215 |
| Cow position: | chr27:27449945-27450139 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 27-218 |
| Cow position: | chr27:16103745-16103550 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 27-219 |
| Cow position: | chr27:15668831-15669032 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 179 |
| Conread position: | 28-215 |
| Cow position: | chr27:5781024-5780843 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 28-217 |
| Cow position: | chr27:22497958-22497768 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 99 |
| Conread position: | 28-241 |
| Cow position: | chr27:14169336-14169117 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 166 |
| Conread position: | 29-189 |
| Cow position: | chr27:8790808-8790972 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 122 |
| Conread position: | 29-209 |
| Cow position: | chr27:3498487-3498307 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 29-213 |
| Cow position: | chr27:20048567-20048383 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 30-219 |
| Cow position: | chr27:11982713-11982908 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 30-231 |
| Cow position: | chr27:19779813-19779602 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 157 |
| Conread position: | 31-210 |
| Cow position: | chr27:26121693-26121507 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 31-216 |
| Cow position: | chr27:26111982-26112175 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 31-218 |
| Cow position: | chr27:15867323-15867133 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 107, 92 |
| Conread position: | 31-227 |
| Cow position: | chr27:27020164-27020364 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 132, 84 |
| Conread position: | 32-188 |
| Cow position: | chr27:23107967-23108131 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 32-189 |
| Cow position: | chr27:299448-299604 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 102, 86 |
| Conread position: | 32-218 |
| Cow position: | chr27:6151231-6151052 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 7 |
| Conread position: | 32-218 |
| Cow position: | chr27:19387951-19387764 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 142 |
| Conread position: | 32-237 |
| Cow position: | chr27:4944582-4944787 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 114, 73 |
| Conread position: | 34-210 |
| Cow position: | chr27:31183509-31183317 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 35-209 |
| Cow position: | chr27:31153625-31153809 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 148 |
| Conread position: | 37-188 |
| Cow position: | chr27:23477873-23477719 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 58 |
| Conread position: | 37-189 |
| Cow position: | chr27:13411442-13411598 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 88, 51 |
| Conread position: | 37-189 |
| Cow position: | chr27:26909664-26909818 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 93, 81 |
| Conread position: | 37-190 |
| Cow position: | chr27:13318047-13318208 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 37-208 |
| Cow position: | chr27:15865534-15865361 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 81 |
| Conread position: | 37-210 |
| Cow position: | chr27:1353510-1353330 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 162 |
| Conread position: | 37-210 |
| Cow position: | chr27:16965506-16965323 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 37-211 |
| Cow position: | chr27:7935229-7935412 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 37-211 |
| Cow position: | chr27:19932996-19932814 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 17 |
| Conread position: | 37-214 |
| Cow position: | chr27:19452929-19452742 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 85, 179 |
| Conread position: | 37-215 |
| Cow position: | chr27:26437194-26437376 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 37-216 |
| Cow position: | chr27:27528893-27529076 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 58, 132 |
| Conread position: | 37-218 |
| Cow position: | chr27:15315446-15315264 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 86, 136 |
| Conread position: | 37-223 |
| Cow position: | chr27:14343521-14343696 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 38-205 |
| Cow position: | chr27:28931875-28932049 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 38-210 |
| Cow position: | chr27:31386705-31386882 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 38-211 |
| Cow position: | chr27:20749084-20749255 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 38-213 |
| Cow position: | chr27:3306704-3306532 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 38-215 |
| Cow position: | chr27:20081199-20081387 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 38-215 |
| Cow position: | chr27:26400795-26400973 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 103 |
| Conread position: | 38-232 |
| Cow position: | chr27:30914936-30914735 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 175 |
| Conread position: | 39-187 |
| Cow position: | chr27:19660857-19660700 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 40-137 |
| Cow position: | chr27:30489483-30489582 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 40-182 |
| Cow position: | chr27:21025613-21025470 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 40-188 |
| Cow position: | chr27:24693340-24693189 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 40-188 |
| Cow position: | chr27:26504229-26504075 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 40-189 |
| Cow position: | chr27:1184250-1184403 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 141 |
| Conread position: | 40-189 |
| Cow position: | chr27:6319846-6319693 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 40-189 |
| Cow position: | chr27:16705178-16705023 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 40-189 |
| Cow position: | chr27:17102823-17102670 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 40-189 |
| Cow position: | chr27:23177385-23177542 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 40-203 |
| Cow position: | chr27:26643612-26643459 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 40-203 |
| Cow position: | chr27:29493973-29494142 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 40-207 |
| Cow position: | chr27:24223879-24223700 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 40-209 |
| Cow position: | chr27:18491483-18491307 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 40-210 |
| Cow position: | chr27:10979790-10979609 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 40-210 |
| Cow position: | chr27:12459213-12459037 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 40-210 |
| Cow position: | chr27:28478507-28478333 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 40-211 |
| Cow position: | chr27:23485136-23484959 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 65 |
| Conread position: | 40-214 |
| Cow position: | chr27:26226363-26226546 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 40-215 |
| Cow position: | chr27:23594248-23594063 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 171 |
| Conread position: | 40-215 |
| Cow position: | chr27:24477344-24477171 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 40-216 |
| Cow position: | chr27:13204386-13204205 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 40-217 |
| Cow position: | chr27:24035349-24035538 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 40-218 |
| Cow position: | chr27:9504480-9504294 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 74 |
| Conread position: | 40-219 |
| Cow position: | chr27:11134013-11133823 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 40-224 |
| Cow position: | chr27:27055213-27055032 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 106, 78 |
| Conread position: | 41-189 |
| Cow position: | chr27:12596700-12596552 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 77 |
| Conread position: | 41-198 |
| Cow position: | chr27:26087242-26087076 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 41-205 |
| Cow position: | chr27:28001889-28002049 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 41-211 |
| Cow position: | chr27:16246728-16246550 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 87 |
| Conread position: | 41-215 |
| Cow position: | chr27:2592465-2592280 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 41-234 |
| Cow position: | chr27:20354520-20354324 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 43-210 |
| Cow position: | chr27:28190280-28190442 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 43-218 |
| Cow position: | chr27:6162490-6162663 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 10 |
| Conread position: | 44-170 |
| Cow position: | chr27:1768703-1768833 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 85, 72 |
| Conread position: | 44-189 |
| Cow position: | chr27:641125-641267 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 85 |
| Conread position: | 44-189 |
| Cow position: | chr27:9253193-9253342 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 44-189 |
| Cow position: | chr27:23452382-23452233 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 44-196 |
| Cow position: | chr27:15409116-15409262 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 101, 73 |
| Conread position: | 44-208 |
| Cow position: | chr27:31248689-31248855 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 73 |
| Conread position: | 44-210 |
| Cow position: | chr27:6106624-6106450 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 44-210 |
| Cow position: | chr27:27606376-27606543 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 136 |
| Conread position: | 44-211 |
| Cow position: | chr27:29614962-29614790 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 44-214 |
| Cow position: | chr27:6541552-6541380 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 44-220 |
| Cow position: | chr27:20484650-20484472 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 73 |
| Conread position: | 44-236 |
| Cow position: | chr27:22220474-22220273 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 44-236 |
| Cow position: | chr27:26245623-26245823 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 44-260 |
| Cow position: | chr27:23100728-23100941 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 74, 70 |
| Conread position: | 45-188 |
| Cow position: | chr27:20283555-20283415 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 50 |
| Conread position: | 52-185 |
| Cow position: | chr27:16504998-16505132 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 52-211 |
| Cow position: | chr27:27438593-27438760 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 52-217 |
| Cow position: | chr27:28921980-28922158 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 52-218 |
| Cow position: | chr27:21101378-21101552 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 53-136 |
| Cow position: | chr27:29183305-29183387 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 74 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 53-187 |
| Cow position: | chr27:31031366-31031239 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 53-189 |
| Cow position: | chr27:1067479-1067346 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 53-193 |
| Cow position: | chr27:25790208-25790069 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 126 |
| Conread position: | 53-200 |
| Cow position: | chr27:23890849-23890691 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 53-202 |
| Cow position: | chr27:2036631-2036478 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 53-210 |
| Cow position: | chr27:6924996-6924831 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 53-210 |
| Cow position: | chr27:23760070-23760229 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 53-211 |
| Cow position: | chr27:15454122-15453958 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 65 |
| Conread position: | 53-211 |
| Cow position: | chr27:19074111-19074280 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 32 |
| Conread position: | 53-214 |
| Cow position: | chr27:11528842-11528676 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 149 |
| Conread position: | 53-215 |
| Cow position: | chr27:672578-672408 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 53-218 |
| Cow position: | chr27:18791598-18791773 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 53-219 |
| Cow position: | chr27:23560120-23560289 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 64, 158 |
| Conread position: | 53-222 |
| Cow position: | chr27:13251928-13251764 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 53-223 |
| Cow position: | chr27:16047587-16047755 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 53-224 |
| Cow position: | chr27:26984258-26984089 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 53-231 |
| Cow position: | chr27:27856244-27856066 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 65 |
| Conread position: | 53-234 |
| Cow position: | chr27:4398580-4398764 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 63, 82 |
| Conread position: | 53-243 |
| Cow position: | chr27:21661047-21660849 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 73, 178 |
| Conread position: | 53-248 |
| Cow position: | chr27:24358244-24358047 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 54-189 |
| Cow position: | chr27:178773-178633 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 54-209 |
| Cow position: | chr27:28062288-28062443 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 92, 138 |
| Conread position: | 54-216 |
| Cow position: | chr27:2957322-2957163 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 92, 61 |
| Conread position: | 54-222 |
| Cow position: | chr27:15434235-15434065 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 119 |
| Conread position: | 54-234 |
| Cow position: | chr27:27632691-27632866 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 55-203 |
| Cow position: | chr27:26314214-26314370 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 55-214 |
| Cow position: | chr27:21447920-21448076 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 55-214 |
| Cow position: | chr27:22748237-22748068 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 56-217 |
| Cow position: | chr27:20561490-20561332 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 73 |
| Conread position: | 56-236 |
| Cow position: | chr27:26939985-26939803 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 143 |
| Conread position: | 58-203 |
| Cow position: | chr27:19685807-19685955 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 109 |
| Conread position: | 58-214 |
| Cow position: | chr27:4486871-4487035 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 39 |
| Conread position: | 59-215 |
| Cow position: | chr27:22150789-22150950 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 60-233 |
| Cow position: | chr27:28476209-28476381 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 126 |
| Conread position: | 61-229 |
| Cow position: | chr27:1778952-1779121 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 63-214 |
| Cow position: | chr27:23527600-23527754 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 63-216 |
| Cow position: | chr27:28192714-28192868 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 125 |
| Conread position: | 64-218 |
| Cow position: | chr27:24952054-24952213 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 103-214 |
| Cow position: | chr27:15697443-15697328 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 14 |
Show alignments to all cow chromosomes.