Cow genome map

Conread name: Ss1.1-Fet1-UMC-pd20fet-016-c11.3

Conread position: 19-199
Cow position: chrX:41862397-41862580 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 161

Conread position: 21-201
Cow position: chrX:19761797-19761976 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 26

Conread position: 21-211
Cow position: chrX:12789-12979 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 58

Conread position: 21-213
Cow position: chrX:29682072-29681876 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 91

Conread position: 22-190
Cow position: chrX:27170780-27170952 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 22-203
Cow position: chrX:1101597-1101779 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 82

Conread position: 24-205
Cow position: chrX:40336955-40337144 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 10

Conread position: 26-188
Cow position: chrX:22074838-22075009 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 142

Conread position: 26-196
Cow position: chrX:40685284-40685107 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 26-203
Cow position: chrX:42432467-42432285 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 15, 37

Conread position: 26-206
Cow position: chrX:32208780-32208591 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 11

Conread position: 26-210
Cow position: chrX:22115275-22115073 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 11

Conread position: 26-211
Cow position: chrX:31480013-31480203 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 11

Conread position: 26-213
Cow position: chrX:27668916-27668721 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 11

Conread position: 26-216
Cow position: chrX:42479875-42480070 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 11

Conread position: 26-217
Cow position: chrX:41871109-41871300 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 11

Conread position: 26-220
Cow position: chrX:8869360-8869156 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 101

Conread position: 26-220
Cow position: chrX:20584370-20584557 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 11

Conread position: 26-221
Cow position: chrX:16836244-16836043 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 11

Conread position: 27-164
Cow position: chrX:34532565-34532708 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 27-189
Cow position: chrX:21986246-21986086 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 91

Conread position: 27-203
Cow position: chrX:9650979-9650798 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 27-204
Cow position: chrX:23471821-23471637 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 27-205
Cow position: chrX:45502191-45502366 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 92

Conread position: 27-209
Cow position: chrX:37867478-37867669 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 27-210
Cow position: chrX:26205403-26205217 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 154

Conread position: 27-210
Cow position: chrX:43115194-43115386 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 10

Conread position: 27-211
Cow position: chrX:8759672-8759860 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 40

Conread position: 27-211
Cow position: chrX:27145649-27145844 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 97

Conread position: 27-212
Cow position: chrX:9201593-9201781 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 92

Conread position: 27-214
Cow position: chrX:4289487-4289679 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 100

Conread position: 27-215
Cow position: chrX:22392939-22392749 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 12, 79

Conread position: 27-216
Cow position: chrX:38321337-38321138 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 27-218
Cow position: chrX:5026301-5026495 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 106

Conread position: 27-219
Cow position: chrX:17966386-17966569 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 11, 111

Conread position: 27-220
Cow position: chrX:33855174-33854981 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 48

Conread position: 27-222
Cow position: chrX:19018786-19018581 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 185

Conread position: 27-223
Cow position: chrX:32866920-32867124 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 92

Conread position: 27-225
Cow position: chrX:42875257-42875459 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 173

Conread position: 28-214
Cow position: chrX:13923911-13924103 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 89

Conread position: 28-217
Cow position: chrX:37867300-37867502 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 29-211
Cow position: chrX:5876155-5876339 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 118

Conread position: 29-215
Cow position: chrX:34411894-34412092 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 29-218
Cow position: chrX:40556411-40556216 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 89

Conread position: 31-209
Cow position: chrX:17524334-17524149 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 178

Conread position: 31-211
Cow position: chrX:17525817-17525641 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 115, 87

Conread position: 31-211
Cow position: chrX:38964158-38964333 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 31-213
Cow position: chrX:16762821-16763009 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 24

Conread position: 31-231
Cow position: chrX:42331334-42331530 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 87

Conread position: 31-234
Cow position: chrX:43008659-43008869 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 184

Conread position: 32-164
Cow position: chrX:4515741-4515878 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 42

Conread position: 32-189
Cow position: chrX:31436524-31436684 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 86

Conread position: 34-211
Cow position: chrX:11326044-11325869 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 55

Conread position: 36-217
Cow position: chrX:13177425-13177237 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 6, 177

Conread position: 36-218
Cow position: chrX:19717575-19717760 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 92, 59

Conread position: 37-187
Cow position: chrX:46072761-46072617 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 109, 87

Conread position: 37-189
Cow position: chrX:6480540-6480380 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 37-189
Cow position: chrX:11781309-11781462 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 57

Conread position: 37-189
Cow position: chrX:35681623-35681782 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 37-189
Cow position: chrX:41810112-41809960 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 81

Conread position: 37-189
Cow position: chrX:44123311-44123464 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 87

Conread position: 37-199
Cow position: chrX:30824045-30824210 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 37-199
Cow position: chrX:42836237-42836406 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 37-203
Cow position: chrX:15100039-15100207 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 124

Conread position: 37-203
Cow position: chrX:32910160-32910328 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 39

Conread position: 37-208
Cow position: chrX:1960369-1960191 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 86

Conread position: 37-209
Cow position: chrX:3806738-3806912 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 157

Conread position: 37-209
Cow position: chrX:35885671-35885497 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 81

Conread position: 37-211
Cow position: chrX:161468-161637 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 67

Conread position: 37-211
Cow position: chrX:36976007-36976192 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 81

Conread position: 37-211
Cow position: chrX:37752050-37751874 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 37-211
Cow position: chrX:47079683-47079864 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 155

Conread position: 37-215
Cow position: chrX:6389137-6389323 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 29

Conread position: 37-215
Cow position: chrX:16984697-16984875 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 55

Conread position: 37-215
Cow position: chrX:19394609-19394797 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 37-215
Cow position: chrX:27705642-27705828 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 132

Conread position: 37-215
Cow position: chrX:41199280-41199464 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 39, 83

Conread position: 37-215
Cow position: chrX:42927768-42927591 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 109

Conread position: 37-215
Cow position: chrX:46587878-46588061 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 78

Conread position: 37-216
Cow position: chrX:20887585-20887402 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 67, 86

Conread position: 37-217
Cow position: chrX:38642305-38642483 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 107

Conread position: 37-217
Cow position: chrX:41941679-41941868 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 37-217
Cow position: chrX:48118677-48118493 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 65

Conread position: 37-218
Cow position: chrX:597418-597234 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 39

Conread position: 37-218
Cow position: chrX:11454242-11454418 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 43

Conread position: 37-218
Cow position: chrX:12290775-12290962 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 37-218
Cow position: chrX:29467722-29467538 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 80

Conread position: 37-218
Cow position: chrX:46909871-46910052 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 81

Conread position: 37-219
Cow position: chrX:11633738-11633928 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 37-219
Cow position: chrX:34504993-34504809 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 61

Conread position: 37-219
Cow position: chrX:35285229-35285421 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 37-219
Cow position: chrX:45110712-45110895 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 81

Conread position: 37-220
Cow position: chrX:16763869-16763682 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 80

Conread position: 37-221
Cow position: chrX:12095716-12095516 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 95, 80

Conread position: 37-221
Cow position: chrX:12972739-12972926 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 37-224
Cow position: chrX:29601772-29601574 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 86, 177

Conread position: 37-228
Cow position: chrX:41027215-41027417 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 193

Conread position: 37-232
Cow position: chrX:36866229-36866433 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 51

Conread position: 37-234
Cow position: chrX:27306510-27306699 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 37-243
Cow position: chrX:17956747-17956957 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 89, 21

Conread position: 38-201
Cow position: chrX:35268918-35269083 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 135

Conread position: 38-208
Cow position: chrX:42247125-42246944 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 38-218
Cow position: chrX:31729499-31729681 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 77

Conread position: 39-208
Cow position: chrX:16556162-16555990 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 47

Conread position: 40-187
Cow position: chrX:1615987-1615845 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 59

Conread position: 40-189
Cow position: chrX:1088084-1087933 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 78

Conread position: 40-189
Cow position: chrX:8326960-8327120 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 40-189
Cow position: chrX:27415524-27415373 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 86

Conread position: 40-189
Cow position: chrX:42381056-42380897 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 142

Conread position: 40-193
Cow position: chrX:25286665-25286503 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 40-206
Cow position: chrX:10252141-10251969 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 40-209
Cow position: chrX:6407600-6407780 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 40-209
Cow position: chrX:11656137-11656314 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 40-209
Cow position: chrX:12437214-12437041 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 32

Conread position: 40-209
Cow position: chrX:41215381-41215559 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 40-210
Cow position: chrX:31442773-31442604 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 81

Conread position: 40-211
Cow position: chrX:4467023-4467187 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 80

Conread position: 40-211
Cow position: chrX:23088911-23089074 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 40-213
Cow position: chrX:11762945-11762769 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 80

Conread position: 40-213
Cow position: chrX:39290415-39290599 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 40-214
Cow position: chrX:23359055-23358874 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 40-214
Cow position: chrX:28940298-28940484 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 40-214
Cow position: chrX:34837008-34836833 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 87

Conread position: 40-214
Cow position: chrX:35658855-35659034 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 142

Conread position: 40-215
Cow position: chrX:5487880-5487708 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 106, 83

Conread position: 40-215
Cow position: chrX:11529402-11529579 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 40-215
Cow position: chrX:34991420-34991604 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 80

Conread position: 40-216
Cow position: chrX:6544313-6544486 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 105, 77

Conread position: 40-217
Cow position: chrX:20957294-20957487 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 40-217
Cow position: chrX:38218770-38218957 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 40-218
Cow position: chrX:4152975-4152797 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 81

Conread position: 40-218
Cow position: chrX:41453358-41453545 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 84

Conread position: 40-219
Cow position: chrX:1102076-1102263 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 101, 78

Conread position: 40-219
Cow position: chrX:19469450-19469269 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 73

Conread position: 40-220
Cow position: chrX:23335916-23335730 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 13

Conread position: 40-220
Cow position: chrX:24749144-24749332 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 111

Conread position: 40-220
Cow position: chrX:42449958-42449767 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 86

Conread position: 40-223
Cow position: chrX:41526472-41526284 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 33

Conread position: 41-189
Cow position: chrX:1122490-1122332 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 149

Conread position: 41-189
Cow position: chrX:27228186-27228344 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 41-215
Cow position: chrX:36356165-36356347 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 20

Conread position: 41-217
Cow position: chrX:23136800-23136978 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 105, 127

Conread position: 41-218
Cow position: chrX:13121998-13122188 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 13

Conread position: 41-219
Cow position: chrX:27431861-27431678 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 140

Conread position: 41-219
Cow position: chrX:47855041-47855224 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 32

Conread position: 41-223
Cow position: chrX:39352843-39353024 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 87

Conread position: 41-237
Cow position: chrX:25232057-25232245 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 77

Conread position: 42-191
Cow position: chrX:17795039-17795196 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 152

Conread position: 42-225
Cow position: chrX:4269002-4268818 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 84, 13

Conread position: 43-189
Cow position: chrX:6640489-6640639 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 54

Conread position: 43-215
Cow position: chrX:39642560-39642387 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 37

Conread position: 43-236
Cow position: chrX:30962814-30962609 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 10

Conread position: 44-170
Cow position: chrX:23188721-23188593 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 44-184
Cow position: chrX:35542950-35543094 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 44-188
Cow position: chrX:31827781-31827641 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 67

Conread position: 44-189
Cow position: chrX:20151919-20152063 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 95, 80

Conread position: 44-189
Cow position: chrX:23497628-23497482 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 82, 67

Conread position: 44-189
Cow position: chrX:27074988-27074836 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 44-191
Cow position: chrX:11653833-11653984 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 74

Conread position: 44-192
Cow position: chrX:4768795-4768946 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 89

Conread position: 44-208
Cow position: chrX:42760315-42760486 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 159

Conread position: 44-209
Cow position: chrX:20583729-20583899 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 73

Conread position: 44-210
Cow position: chrX:11602420-11602246 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 85, 13

Conread position: 44-210
Cow position: chrX:37781046-37780877 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 132

Conread position: 44-211
Cow position: chrX:1466225-1466402 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 44-211
Cow position: chrX:34270624-34270798 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 44-214
Cow position: chrX:18812172-18812335 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 74

Conread position: 44-215
Cow position: chrX:231955-231780 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 12

Conread position: 44-218
Cow position: chrX:46068696-46068517 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 44-219
Cow position: chrX:32747795-32747969 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 74

Conread position: 44-220
Cow position: chrX:42855521-42855707 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 79

Conread position: 44-221
Cow position: chrX:51838-51657 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 163

Conread position: 44-240
Cow position: chrX:5118435-5118231 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 170

Conread position: 45-212
Cow position: chrX:3494981-3494812 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 77, 24

Conread position: 48-218
Cow position: chrX:1571522-1571352 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 70

Conread position: 52-203
Cow position: chrX:9252092-9251934 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 53-188
Cow position: chrX:41166753-41166615 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 53-189
Cow position: chrX:25420403-25420539 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 65

Conread position: 53-193
Cow position: chrX:36722733-36722594 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 92, 65

Conread position: 53-195
Cow position: chrX:39419642-39419500 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 91, 65

Conread position: 53-199
Cow position: chrX:28850795-28850943 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 53-203
Cow position: chrX:40035368-40035208 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 53-204
Cow position: chrX:27511500-27511651 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 65

Conread position: 53-207
Cow position: chrX:38094448-38094293 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 125

Conread position: 53-208
Cow position: chrX:33654772-33654609 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 53-208
Cow position: chrX:37072461-37072622 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 53-210
Cow position: chrX:27175070-27175236 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 65

Conread position: 53-210
Cow position: chrX:31744932-31744780 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 53-211
Cow position: chrX:4632785-4632612 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 53-211
Cow position: chrX:12979762-12979598 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 53-211
Cow position: chrX:24633767-24633928 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 69, 128

Conread position: 53-211
Cow position: chrX:34314096-34314257 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 64

Conread position: 53-211
Cow position: chrX:37749912-37749752 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 64

Conread position: 53-214
Cow position: chrX:11589295-11589127 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 156

Conread position: 53-215
Cow position: chrX:2936029-2936200 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 53-215
Cow position: chrX:5919564-5919733 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 53-215
Cow position: chrX:24331848-24332018 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 64

Conread position: 53-215
Cow position: chrX:27261264-27261431 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 128

Conread position: 53-216
Cow position: chrX:29050319-29050485 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 118

Conread position: 53-218
Cow position: chrX:41010970-41011138 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 63

Conread position: 53-227
Cow position: chrX:34441382-34441202 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 160

Conread position: 53-235
Cow position: chrX:8642118-8642305 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 14

Conread position: 53-236
Cow position: chrX:2314547-2314356 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 48

Conread position: 53-242
Cow position: chrX:35409824-35410021 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 30

Conread position: 54-188
Cow position: chrX:35382963-35382828 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 71, 8

Conread position: 54-189
Cow position: chrX:30840619-30840756 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 54-193
Cow position: chrX:4486951-4486805 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 54-208
Cow position: chrX:41238282-41238126 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 64

Conread position: 54-209
Cow position: chrX:35392225-35392065 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 63

Conread position: 54-211
Cow position: chrX:34792238-34792087 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 92, 13

Conread position: 54-216
Cow position: chrX:14135751-14135917 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 63

Conread position: 54-217
Cow position: chrX:42893999-42894169 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 54-218
Cow position: chrX:4750259-4750095 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 38

Conread position: 54-230
Cow position: chrX:4559806-4559992 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 55-203
Cow position: chrX:38587769-38587611 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 55-213
Cow position: chrX:16323944-16323777 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 150

Conread position: 55-214
Cow position: chrX:42506875-42506707 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 156

Conread position: 55-218
Cow position: chrX:33466698-33466869 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 157

Conread position: 55-219
Cow position: chrX:45429948-45429786 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 75

Conread position: 55-220
Cow position: chrX:43059177-43059011 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 66, 148

Conread position: 56-209
Cow position: chrX:35029851-35029698 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 62

Conread position: 56-221
Cow position: chrX:42216554-42216386 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 18

Conread position: 59-189
Cow position: chrX:14973668-14973542 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 67

Conread position: 59-205
Cow position: chrX:9425675-9425531 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 87

Conread position: 59-210
Cow position: chrX:34565362-34565521 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 46

Conread position: 60-207
Cow position: chrX:31279845-31279691 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 57

Conread position: 61-209
Cow position: chrX:35509599-35509445 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 63-191
Cow position: chrX:43028314-43028446 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 65-210
Cow position: chrX:38727055-38726905 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 59

Conread position: 65-211
Cow position: chrX:1996368-1996214 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 65-214
Cow position: chrX:4399203-4399358 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 66-197
Cow position: chrX:26956467-26956338 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 83, 57

Conread position: 70-210
Cow position: chrX:17744713-17744862 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 70-211
Cow position: chrX:37176963-37177109 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 100

Conread position: 70-211
Cow position: chrX:40108254-40108108 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 126

Conread position: 70-224
Cow position: chrX:19356552-19356714 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 71-215
Cow position: chrX:46291235-46291386 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 31

Conread position: 74-189
Cow position: chrX:22284783-22284898 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 49

Conread position: 80-213
Cow position: chrX:20666794-20666660 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 44

Conread position: 81-209
Cow position: chrX:13892917-13893040 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 42

Show alignments to all cow chromosomes.