Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010001G06.5 |
| Conread position: | 847-1242 |
| Cow position: | chr10:21939091-21938698 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 65, 77 |
| Conread position: | 858-1536 |
| Cow position: | chr10:8996682-8996002 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 858-1542 |
| Cow position: | chr10:8996850-8996164 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 859-1225 |
| Cow position: | chr10:9031245-9031612 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 860-1234 |
| Cow position: | chr10:9010238-9009864 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 860-1548 |
| Cow position: | chr10:8996762-8996074 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 109 |
| Conread position: | 868-1405 |
| Cow position: | chr10:9010398-9009861 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 333 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 334, 315 |
| Conread position: | 872-1335 |
| Cow position: | chr10:21939150-21938689 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 403, 0 |
| Conread position: | 923-1542 |
| Cow position: | chr10:8996867-8996248 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 923-1544 |
| Cow position: | chr10:9010511-9009890 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 942-1457 |
| Cow position: | chr10:21939164-21938652 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 956-1542 |
| Cow position: | chr10:9010562-9009976 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 213 |
| Conread position: | 957-1361 |
| Cow position: | chr10:9031260-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 967-1541 |
| Cow position: | chr10:21939223-21938652 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 540, 476 |
| Conread position: | 1007-1542 |
| Cow position: | chr10:21939337-21938816 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 113 |
| Conread position: | 1018-1445 |
| Cow position: | chr10:9031237-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1041-1548 |
| Cow position: | chr10:8996833-8996326 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 135 |
| Conread position: | 1109-1548 |
| Cow position: | chr10:8996849-8996410 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 328 |
| Conread position: | 1127-1544 |
| Cow position: | chr10:9010559-9010142 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 145, 141 |
| Conread position: | 1180-1544 |
| Cow position: | chr10:9031231-9031595 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 87, 92 |
| Conread position: | 1220-1548 |
| Cow position: | chr10:21939376-21939062 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 1364-1548 |
| Cow position: | chr10:9010574-9010390 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 1386-1538 |
| Cow position: | chr10:21939378-21939226 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.