Cow genome map

Conread name: Ss1.1-Liv1-LVR010001G06.5

Conread position: 832-1402
Cow position:
Alignm length: 573
Alignm identity: 335
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 419, 410

Conread position: 835-1543
Cow position:
Alignm length: 711
Alignm identity: 414
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 166, 173

Conread position: 844-1542
Cow position:
Alignm length: 701
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 88

Conread position: 845-1460
Cow position:
Alignm length: 618
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 399

Conread position: 847-1070
Cow position:
Alignm length: 225
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 59

Conread position: 847-1123
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 65, 61

Conread position: 847-1234
Cow position:
Alignm length: 388
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 847-1236
Cow position:
Alignm length: 391
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 58

Conread position: 847-1535
Cow position:
Alignm length: 691
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 46

Conread position: 848-1224
Cow position:
Alignm length: 378
Alignm identity: 235
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 60

Conread position: 848-1319
Cow position:
Alignm length: 473
Alignm identity: 283
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 254, 248

Conread position: 848-1542
Cow position:
Alignm length: 702
Alignm identity: 417
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 144, 127

Conread position: 849-1542
Cow position:
Alignm length: 695
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 59

Conread position: 849-1542
Cow position:
Alignm length: 698
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 410

Conread position: 849-1542
Cow position:
Alignm length: 698
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 231

Conread position: 849-1542
Cow position:
Alignm length: 698
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 410

Conread position: 855-1308
Cow position:
Alignm length: 456
Alignm identity: 281
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 53

Conread position: 856-1542
Cow position:
Alignm length: 693
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 10

Conread position: 857-1548
Cow position:
Alignm length: 692
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 859-1543
Cow position:
Alignm length: 689
Alignm identity: 409
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 49

Conread position: 859-1548
Cow position:
Alignm length: 692
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 49

Conread position: 860-1202
Cow position:
Alignm length: 344
Alignm identity: 208
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 276, 270

Conread position: 860-1234
Cow position:
Alignm length: 375
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 860-1401
Cow position:
Alignm length: 547
Alignm identity: 329
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 133, 148

Conread position: 861-1544
Cow position:
Alignm length: 686
Alignm identity: 406
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 14

Conread position: 866-1544
Cow position:
Alignm length: 683
Alignm identity: 398
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 6, 141

Conread position: 868-1212
Cow position:
Alignm length: 347
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 40

Conread position: 868-1486
Cow position:
Alignm length: 623
Alignm identity: 370
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 40

Conread position: 868-1544
Cow position:
Alignm length: 679
Alignm identity: 383
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 301, 307

Conread position: 868-1548
Cow position:
Alignm length: 682
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 40

Conread position: 868-1548
Cow position:
Alignm length: 683
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 868-1548
Cow position:
Alignm length: 682
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 14

Conread position: 869-1444
Cow position:
Alignm length: 578
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 869-1548
Cow position:
Alignm length: 682
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 293

Conread position: 871-1533
Cow position:
Alignm length: 668
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 44

Conread position: 872-1205
Cow position:
Alignm length: 336
Alignm identity: 205
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 207, 219

Conread position: 873-1154
Cow position:
Alignm length: 282
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 873-1195
Cow position:
Alignm length: 325
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 35

Conread position: 873-1242
Cow position:
Alignm length: 370
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 873-1524
Cow position:
Alignm length: 653
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 469

Conread position: 873-1548
Cow position:
Alignm length: 677
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 30

Conread position: 874-1453
Cow position:
Alignm length: 583
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 874-1541
Cow position:
Alignm length: 670
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 212

Conread position: 874-1544
Cow position:
Alignm length: 672
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 19

Conread position: 874-1548
Cow position:
Alignm length: 676
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 32

Conread position: 874-1548
Cow position:
Alignm length: 679
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 34

Conread position: 875-1319
Cow position:
Alignm length: 447
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 49

Conread position: 875-1536
Cow position:
Alignm length: 669
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 216

Conread position: 875-1541
Cow position:
Alignm length: 669
Alignm identity: 381
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 130, 113

Conread position: 875-1542
Cow position:
Alignm length: 671
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 875-1544
Cow position:
Alignm length: 674
Alignm identity: 389
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 40

Conread position: 875-1548
Cow position:
Alignm length: 676
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 27

Conread position: 880-1161
Cow position:
Alignm length: 282
Alignm identity: 176
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 914-1542
Cow position:
Alignm length: 633
Alignm identity: 357
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 132, 139

Conread position: 914-1544
Cow position:
Alignm length: 631
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 918-1548
Cow position:
Alignm length: 634
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 269

Conread position: 922-1487
Cow position:
Alignm length: 572
Alignm identity: 356
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 154, 11

Conread position: 922-1490
Cow position:
Alignm length: 570
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 338

Conread position: 922-1548
Cow position:
Alignm length: 630
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 84

Conread position: 922-1548
Cow position:
Alignm length: 627
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 923-1358
Cow position:
Alignm length: 437
Alignm identity: 276
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 402, 409

Conread position: 923-1458
Cow position:
Alignm length: 537
Alignm identity: 305
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 359, 0

Conread position: 923-1548
Cow position:
Alignm length: 629
Alignm identity: 365
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 156, 163

Conread position: 923-1548
Cow position:
Alignm length: 628
Alignm identity: 364
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 242, 253

Conread position: 924-1542
Cow position:
Alignm length: 620
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 536, 206

Conread position: 924-1548
Cow position:
Alignm length: 627
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 925-1542
Cow position:
Alignm length: 623
Alignm identity: 376
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 121, 8

Conread position: 926-1410
Cow position:
Alignm length: 486
Alignm identity: 302
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 237, 248

Conread position: 928-1548
Cow position:
Alignm length: 627
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 316

Conread position: 932-1414
Cow position:
Alignm length: 486
Alignm identity: 298
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 152, 159

Conread position: 932-1449
Cow position:
Alignm length: 520
Alignm identity: 315
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 152, 159

Conread position: 932-1534
Cow position:
Alignm length: 603
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 932-1541
Cow position:
Alignm length: 611
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 424

Conread position: 932-1542
Cow position:
Alignm length: 613
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 309

Conread position: 932-1542
Cow position:
Alignm length: 612
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 567, 578

Conread position: 932-1544
Cow position:
Alignm length: 613
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 932-1548
Cow position:
Alignm length: 617
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 932-1548
Cow position:
Alignm length: 620
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 312

Conread position: 934-1548
Cow position:
Alignm length: 616
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 87

Conread position: 935-1286
Cow position:
Alignm length: 353
Alignm identity: 220
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 309, 323

Conread position: 935-1526
Cow position:
Alignm length: 594
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 303

Conread position: 935-1536
Cow position:
Alignm length: 605
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 157

Conread position: 935-1542
Cow position:
Alignm length: 608
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 935-1542
Cow position:
Alignm length: 609
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 308

Conread position: 935-1542
Cow position:
Alignm length: 609
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 481, 501

Conread position: 935-1548
Cow position:
Alignm length: 615
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 308

Conread position: 935-1548
Cow position:
Alignm length: 614
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 935-1548
Cow position:
Alignm length: 621
Alignm identity: 380
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 73, 56

Conread position: 936-1548
Cow position:
Alignm length: 619
Alignm identity: 355
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 143, 155

Conread position: 939-1370
Cow position:
Alignm length: 433
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 317

Conread position: 940-1548
Cow position:
Alignm length: 611
Alignm identity: 365
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 301, 320

Conread position: 941-1537
Cow position:
Alignm length: 598
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 489, 495

Conread position: 941-1542
Cow position:
Alignm length: 604
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 150

Conread position: 941-1542
Cow position:
Alignm length: 603
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 486

Conread position: 941-1548
Cow position:
Alignm length: 610
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 230

Conread position: 946-1528
Cow position:
Alignm length: 584
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 374

Conread position: 946-1544
Cow position:
Alignm length: 601
Alignm identity: 360
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 123, 133

Conread position: 946-1548
Cow position:
Alignm length: 604
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 107

Conread position: 965-1542
Cow position:
Alignm length: 581
Alignm identity: 345
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 275, 294

Conread position: 968-1538
Cow position:
Alignm length: 575
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 208

Conread position: 986-1543
Cow position:
Alignm length: 564
Alignm identity: 325
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 167

Conread position: 993-1548
Cow position:
Alignm length: 559
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 230

Conread position: 996-1542
Cow position:
Alignm length: 550
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 7

Conread position: 998-1151
Cow position:
Alignm length: 154
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1004-1548
Cow position:
Alignm length: 546
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 1007-1542
Cow position:
Alignm length: 536
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1013-1542
Cow position:
Alignm length: 533
Alignm identity: 325
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 127, 147

Conread position: 1013-1542
Cow position:
Alignm length: 532
Alignm identity: 308
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 66

Conread position: 1017-1263
Cow position:
Alignm length: 247
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1019-1319
Cow position:
Alignm length: 302
Alignm identity: 187
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 85, 77

Conread position: 1020-1542
Cow position:
Alignm length: 533
Alignm identity: 323
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 74

Conread position: 1021-1541
Cow position:
Alignm length: 524
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 223

Conread position: 1023-1454
Cow position:
Alignm length: 432
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1028-1544
Cow position:
Alignm length: 519
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 146

Conread position: 1032-1544
Cow position:
Alignm length: 513
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1055-1548
Cow position:
Alignm length: 496
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 53

Conread position: 1057-1542
Cow position:
Alignm length: 488
Alignm identity: 289
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 129

Conread position: 1076-1542
Cow position:
Alignm length: 469
Alignm identity: 272
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 255, 267

Conread position: 1085-1548
Cow position:
Alignm length: 465
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 11

Conread position: 1086-1548
Cow position:
Alignm length: 467
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 22

Conread position: 1094-1548
Cow position:
Alignm length: 456
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 82

Conread position: 1098-1541
Cow position:
Alignm length: 446
Alignm identity: 268
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 161

Conread position: 1108-1538
Cow position:
Alignm length: 435
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 66

Conread position: 1111-1543
Cow position:
Alignm length: 433
Alignm identity: 250
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1122-1498
Cow position:
Alignm length: 381
Alignm identity: 234
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 150, 122

Conread position: 1189-1548
Cow position:
Alignm length: 361
Alignm identity: 227
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 162, 167

Conread position: 1193-1542
Cow position:
Alignm length: 351
Alignm identity: 231
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 67

Conread position: 1271-1539
Cow position:
Alignm length: 270
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 77

Conread position: 1277-1544
Cow position:
Alignm length: 268
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1301-1542
Cow position:
Alignm length: 242
Alignm identity: 155
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.