Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010001G06.5 |
| Conread position: | 847-1201 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 847-1539 |
| Cow position: | |
| Alignm length: | 695 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 154 |
| Conread position: | 847-1542 |
| Cow position: | |
| Alignm length: | 697 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 506, 502 |
| Conread position: | 848-1548 |
| Cow position: | |
| Alignm length: | 701 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 856-1485 |
| Cow position: | |
| Alignm length: | 639 |
| Alignm identity: | 384 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 857-1543 |
| Cow position: | |
| Alignm length: | 691 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 858-1504 |
| Cow position: | |
| Alignm length: | 647 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 858-1530 |
| Cow position: | |
| Alignm length: | 678 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 858-1548 |
| Cow position: | |
| Alignm length: | 693 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 859-1539 |
| Cow position: | |
| Alignm length: | 683 |
| Alignm identity: | 399 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 860-1205 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 52, 48 |
| Conread position: | 860-1207 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 339, 0 |
| Conread position: | 860-1543 |
| Cow position: | |
| Alignm length: | 687 |
| Alignm identity: | 402 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 474, 483 |
| Conread position: | 860-1548 |
| Cow position: | |
| Alignm length: | 692 |
| Alignm identity: | 414 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 390, 323 |
| Conread position: | 862-1541 |
| Cow position: | |
| Alignm length: | 682 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 53 |
| Conread position: | 863-1530 |
| Cow position: | |
| Alignm length: | 674 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 868-1182 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 868-1538 |
| Cow position: | |
| Alignm length: | 675 |
| Alignm identity: | 399 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 868-1543 |
| Cow position: | |
| Alignm length: | 679 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 468, 475 |
| Conread position: | 868-1543 |
| Cow position: | |
| Alignm length: | 678 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 868-1544 |
| Cow position: | |
| Alignm length: | 684 |
| Alignm identity: | 414 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 223, 207 |
| Conread position: | 868-1544 |
| Cow position: | |
| Alignm length: | 688 |
| Alignm identity: | 414 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 868-1548 |
| Cow position: | |
| Alignm length: | 682 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 868-1548 |
| Cow position: | |
| Alignm length: | 682 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 485, 478 |
| Conread position: | 871-1541 |
| Cow position: | |
| Alignm length: | 672 |
| Alignm identity: | 395 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 373, 91 |
| Conread position: | 871-1544 |
| Cow position: | |
| Alignm length: | 676 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 44 |
| Conread position: | 871-1548 |
| Cow position: | |
| Alignm length: | 680 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 872-1542 |
| Cow position: | |
| Alignm length: | 672 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 223 |
| Conread position: | 873-1425 |
| Cow position: | |
| Alignm length: | 559 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 231, 222 |
| Conread position: | 875-1273 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 875-1347 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 875-1420 |
| Cow position: | |
| Alignm length: | 549 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 210 |
| Conread position: | 875-1485 |
| Cow position: | |
| Alignm length: | 618 |
| Alignm identity: | 363 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 875-1548 |
| Cow position: | |
| Alignm length: | 677 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 875-1548 |
| Cow position: | |
| Alignm length: | 676 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 881-1548 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 910-1544 |
| Cow position: | |
| Alignm length: | 641 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 290 |
| Conread position: | 914-1202 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 267, 0 |
| Conread position: | 918-1544 |
| Cow position: | |
| Alignm length: | 630 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 261 |
| Conread position: | 921-1544 |
| Cow position: | |
| Alignm length: | 627 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 282 |
| Conread position: | 922-1544 |
| Cow position: | |
| Alignm length: | 625 |
| Alignm identity: | 363 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 316, 332 |
| Conread position: | 923-1319 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 923-1537 |
| Cow position: | |
| Alignm length: | 618 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 12 |
| Conread position: | 923-1544 |
| Cow position: | |
| Alignm length: | 624 |
| Alignm identity: | 368 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 240, 251 |
| Conread position: | 929-1464 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 7, 310 |
| Conread position: | 932-1319 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 149, 143 |
| Conread position: | 932-1542 |
| Cow position: | |
| Alignm length: | 614 |
| Alignm identity: | 364 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 70, 76 |
| Conread position: | 933-1543 |
| Cow position: | |
| Alignm length: | 611 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 934-1401 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 336, 329 |
| Conread position: | 934-1544 |
| Cow position: | |
| Alignm length: | 618 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 81 |
| Conread position: | 937-1544 |
| Cow position: | |
| Alignm length: | 610 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 528 |
| Conread position: | 946-1548 |
| Cow position: | |
| Alignm length: | 603 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 947-1548 |
| Cow position: | |
| Alignm length: | 604 |
| Alignm identity: | 349 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 221, 209 |
| Conread position: | 953-1221 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 955-1542 |
| Cow position: | |
| Alignm length: | 589 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 301 |
| Conread position: | 970-1454 |
| Cow position: | |
| Alignm length: | 486 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 282, 178 |
| Conread position: | 1020-1543 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 243 |
| Conread position: | 1052-1543 |
| Cow position: | |
| Alignm length: | 492 |
| Alignm identity: | 298 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 306, 0 |
| Conread position: | 1088-1544 |
| Cow position: | |
| Alignm length: | 459 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 242, 235 |
| Conread position: | 1091-1548 |
| Cow position: | |
| Alignm length: | 462 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 103 |
| Conread position: | 1111-1542 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 52, 63 |
| Conread position: | 1169-1542 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 1197-1545 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 236, 0 |
| Conread position: | 1271-1548 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 170, 159 |
Show alignments to all cow chromosomes.