Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010001G06.5 |
| Conread position: | 835-1540 |
| Cow position: | chr24:17035731-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 417 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 67, 86 |
| Conread position: | 835-1543 |
| Cow position: | chr24:17035983-17035275 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 520, 515 |
| Conread position: | 860-1542 |
| Cow position: | chr24:17078261-17077579 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 862-1548 |
| Cow position: | chr24:17036377-17035690 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 351 |
| Conread position: | 867-1463 |
| Cow position: | chr24:17070466-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 868-1114 |
| Cow position: | chr24:17077749-17077503 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 868-1445 |
| Cow position: | chr24:17078085-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 871-1543 |
| Cow position: | chr24:17036115-17035443 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 393 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 875-1543 |
| Cow position: | chr24:17035775-17035107 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 879-1201 |
| Cow position: | chr24:17013183-17013505 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 884-1529 |
| Cow position: | chr24:17078153-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 315 |
| Conread position: | 922-1213 |
| Cow position: | chr24:17035308-17035017 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 231, 238 |
| Conread position: | 922-1543 |
| Cow position: | chr24:17036484-17035863 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 508, 514 |
| Conread position: | 923-1542 |
| Cow position: | chr24:17035811-17035192 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 923-1543 |
| Cow position: | chr24:17036231-17035611 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 406 |
| Conread position: | 923-1544 |
| Cow position: | chr24:17035979-17035358 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 928-1542 |
| Cow position: | chr24:17036395-17035780 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 317 |
| Conread position: | 932-1547 |
| Cow position: | chr24:17070447-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 383 |
| Conread position: | 932-1548 |
| Cow position: | chr24:17078273-17077657 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 935-1381 |
| Cow position: | chr24:17035463-17035017 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 317, 305 |
| Conread position: | 942-1543 |
| Cow position: | chr24:17036548-17035947 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 517, 522 |
| Conread position: | 946-1225 |
| Cow position: | chr24:17013166-17013445 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1178-1536 |
| Cow position: | chr24:17013146-17013504 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 151, 142 |
Show alignments to all cow chromosomes.