Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010001G06.5 |
| Conread position: | 245-375 |
| Cow position: | chr25:23415295-23415425 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 835-1223 |
| Cow position: | chr25:34769729-34769341 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 211, 218 |
| Conread position: | 835-1548 |
| Cow position: | chr25:33306239-33305534 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 417 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 31 |
| Conread position: | 844-1310 |
| Cow position: | chr25:22235813-22236279 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 845-1334 |
| Cow position: | chr25:23420368-23420856 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 294 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 399, 409 |
| Conread position: | 847-1311 |
| Cow position: | chr25:33157234-33156770 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 462, 442 |
| Conread position: | 848-1114 |
| Cow position: | chr25:33127958-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 848-1458 |
| Cow position: | chr25:33157401-33156791 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 856-1201 |
| Cow position: | chr25:34769624-34769279 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 59 |
| Conread position: | 856-1544 |
| Cow position: | chr25:33298475-33299163 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 141 |
| Conread position: | 856-1544 |
| Cow position: | chr25:36800795-36801471 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 50 |
| Conread position: | 856-1544 |
| Cow position: | chr25:36801215-36801891 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 68 |
| Conread position: | 857-1266 |
| Cow position: | chr25:23420465-23420873 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 857-1284 |
| Cow position: | chr25:36801540-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 52, 65 |
| Conread position: | 857-1530 |
| Cow position: | chr25:34446935-34447608 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 859-1532 |
| Cow position: | chr25:34447273-34447935 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 392 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 411, 388 |
| Conread position: | 860-1442 |
| Cow position: | chr25:34713950-34714532 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 334 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 102, 107 |
| Conread position: | 860-1457 |
| Cow position: | chr25:34769872-34769275 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 860-1542 |
| Cow position: | chr25:34770125-34769442 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 867-1544 |
| Cow position: | chr25:33298990-33299667 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 868-1536 |
| Cow position: | chr25:326589-327263 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 389 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 868-1542 |
| Cow position: | chr25:25652868-25653539 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 408 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 868-1542 |
| Cow position: | chr25:33298823-33299497 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 868-1544 |
| Cow position: | chr25:33298571-33299247 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 138 |
| Conread position: | 868-1544 |
| Cow position: | chr25:33299075-33299751 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 869-1149 |
| Cow position: | chr25:34732515-34732235 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 871-1317 |
| Cow position: | chr25:34714045-34714490 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 871-1457 |
| Cow position: | chr25:34732597-34732011 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 354 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 268, 287 |
| Conread position: | 872-1542 |
| Cow position: | chr25:25652368-25653038 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 872-1542 |
| Cow position: | chr25:25652452-25653122 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 872-1542 |
| Cow position: | chr25:34447034-34447704 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 457, 441 |
| Conread position: | 872-1548 |
| Cow position: | chr25:25652620-25653296 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 457, 448 |
| Conread position: | 873-1114 |
| Cow position: | chr25:33145195-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 873-1181 |
| Cow position: | chr25:33145111-33145419 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 873-1421 |
| Cow position: | chr25:34473520-34474065 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 331 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 873-1543 |
| Cow position: | chr25:34769943-34769273 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 875-1214 |
| Cow position: | chr25:33127901-33128240 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 875-1407 |
| Cow position: | chr25:33299334-33299861 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 321 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 88, 94 |
| Conread position: | 875-1541 |
| Cow position: | chr25:25652203-25652869 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 875-1542 |
| Cow position: | chr25:25652287-25652954 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 875-1542 |
| Cow position: | chr25:33298662-33299329 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 463, 468 |
| Conread position: | 875-1548 |
| Cow position: | chr25:36800982-36801643 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 879-1384 |
| Cow position: | chr25:33127737-33128242 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 881-1424 |
| Cow position: | chr25:23420320-23420863 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 318 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 914-1548 |
| Cow position: | chr25:33298953-33299587 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 919-1395 |
| Cow position: | chr25:36801434-36801910 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 922-1539 |
| Cow position: | chr25:33157411-33156794 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 249 |
| Conread position: | 922-1543 |
| Cow position: | chr25:34769978-34769357 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 923-1366 |
| Cow position: | chr25:36801522-36801963 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 277 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 427, 0 |
| Conread position: | 923-1395 |
| Cow position: | chr25:33299298-33299770 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 923-1540 |
| Cow position: | chr25:36800694-36801311 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 92 |
| Conread position: | 923-1542 |
| Cow position: | chr25:34770145-34769526 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 321 |
| Conread position: | 930-1290 |
| Cow position: | chr25:36844551-36844199 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 930-1544 |
| Cow position: | chr25:33157488-33156873 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 393 |
| Conread position: | 931-1456 |
| Cow position: | chr25:25652847-25653372 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 932-1204 |
| Cow position: | chr25:34733937-34733665 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 81, 86 |
| Conread position: | 932-1274 |
| Cow position: | chr25:33145086-33145428 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 140, 146 |
| Conread position: | 932-1448 |
| Cow position: | chr25:3664087-3664603 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 932-1514 |
| Cow position: | chr25:24385344-24384762 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 349 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 934-1318 |
| Cow position: | chr25:33529088-33529472 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 935-1213 |
| Cow position: | chr25:3676067-3676345 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 935-1364 |
| Cow position: | chr25:3636403-3635974 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 935-1405 |
| Cow position: | chr25:33144924-33145391 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 93, 88 |
| Conread position: | 935-1486 |
| Cow position: | chr25:25652767-25653318 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 88 |
| Conread position: | 935-1526 |
| Cow position: | chr25:33299226-33299817 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 935-1532 |
| Cow position: | chr25:3664006-3664603 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 43 |
| Conread position: | 935-1542 |
| Cow position: | chr25:25652599-25653206 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 62 |
| Conread position: | 935-1542 |
| Cow position: | chr25:33530136-33530743 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 935-1548 |
| Cow position: | chr25:34762988-34763595 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 371 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 298, 131 |
| Conread position: | 939-1402 |
| Cow position: | chr25:36844625-36844175 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 941-1317 |
| Cow position: | chr25:34732611-34732235 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 127, 140 |
| Conread position: | 941-1526 |
| Cow position: | chr25:36801372-36801957 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 402 |
| Conread position: | 945-1544 |
| Cow position: | chr25:36800632-36801231 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 367 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 163, 151 |
| Conread position: | 946-1197 |
| Cow position: | chr25:427331-427582 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 193, 207 |
| Conread position: | 946-1371 |
| Cow position: | chr25:4657463-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 313, 281 |
| Conread position: | 946-1497 |
| Cow position: | chr25:33305400-33304855 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 328 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 62 |
| Conread position: | 946-1540 |
| Cow position: | chr25:34473509-34474100 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 132 |
| Conread position: | 946-1542 |
| Cow position: | chr25:3663933-3664529 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 280 |
| Conread position: | 946-1542 |
| Cow position: | chr25:25652190-25652786 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 946-1543 |
| Cow position: | chr25:326500-327102 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 361 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 321, 8 |
| Conread position: | 947-1421 |
| Cow position: | chr25:22235832-22236306 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 301 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 314, 280 |
| Conread position: | 953-1542 |
| Cow position: | chr25:34713875-34714464 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 958-1486 |
| Cow position: | chr25:33144863-33145388 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 332 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 172, 149 |
| Conread position: | 959-1541 |
| Cow position: | chr25:33530076-33530658 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 342 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 285, 301 |
| Conread position: | 959-1548 |
| Cow position: | chr25:34446953-34447542 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 94 |
| Conread position: | 965-1228 |
| Cow position: | chr25:34733988-34733725 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 107, 116 |
| Conread position: | 965-1463 |
| Cow position: | chr25:33127739-33128237 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 965-1544 |
| Cow position: | chr25:34446875-34447454 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 968-1542 |
| Cow position: | chr25:34762853-34763424 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 104 |
| Conread position: | 996-1526 |
| Cow position: | chr25:34763214-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 5 |
| Conread position: | 998-1543 |
| Cow position: | chr25:24385362-24384817 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 329 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1007-1275 |
| Cow position: | chr25:34763474-34763742 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1007-1542 |
| Cow position: | chr25:34763141-34763673 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 0 |
| Conread position: | 1007-1544 |
| Cow position: | chr25:34770145-34769608 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1009-1538 |
| Cow position: | chr25:22235810-22236339 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 316 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 1018-1503 |
| Cow position: | chr25:33530303-33530788 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 289 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 233, 225 |
| Conread position: | 1018-1542 |
| Cow position: | chr25:33298469-33298993 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 321 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 97, 90 |
| Conread position: | 1019-1543 |
| Cow position: | chr25:326486-327018 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 320 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 17, 396 |
| Conread position: | 1021-1452 |
| Cow position: | chr25:34732615-34732184 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 155, 148 |
| Conread position: | 1025-1548 |
| Cow position: | chr25:33144846-33145366 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 192 |
| Conread position: | 1026-1396 |
| Cow position: | chr25:33506746-33507116 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1027-1541 |
| Cow position: | chr25:33530060-33530574 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 224, 196 |
| Conread position: | 1028-1429 |
| Cow position: | chr25:3675992-3676393 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1028-1542 |
| Cow position: | chr25:25652188-25652702 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 195 |
| Conread position: | 1029-1542 |
| Cow position: | chr25:3663932-3664445 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1030-1455 |
| Cow position: | chr25:4657463-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 323, 318 |
| Conread position: | 1030-1543 |
| Cow position: | chr25:34473509-34474019 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 77 |
| Conread position: | 1032-1542 |
| Cow position: | chr25:3636558-3636048 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1034-1548 |
| Cow position: | chr25:33298569-33299083 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1042-1519 |
| Cow position: | chr25:33529028-33529505 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1049-1534 |
| Cow position: | chr25:33127739-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 300 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1049-1536 |
| Cow position: | chr25:23420320-23420807 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 299 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 111, 125 |
| Conread position: | 1056-1540 |
| Cow position: | chr25:23266994-23266512 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 230, 206 |
| Conread position: | 1063-1548 |
| Cow position: | chr25:33127669-33128154 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 1063-1548 |
| Cow position: | chr25:34446889-34447374 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 298 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 1088-1544 |
| Cow position: | chr25:33305424-33304974 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 385, 20 |
| Conread position: | 1108-1544 |
| Cow position: | chr25:36844624-36844197 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 343, 268 |
| Conread position: | 1109-1543 |
| Cow position: | chr25:36800544-36800978 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 245, 241 |
| Conread position: | 1112-1525 |
| Cow position: | chr25:3675992-3676405 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 139, 111 |
| Conread position: | 1112-1548 |
| Cow position: | chr25:22235829-22236265 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 117, 130 |
| Conread position: | 1114-1539 |
| Cow position: | chr25:4657463-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 239, 234 |
| Conread position: | 1114-1544 |
| Cow position: | chr25:34473509-34473936 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 152, 126 |
| Conread position: | 1115-1548 |
| Cow position: | chr25:34770121-34769688 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1117-1493 |
| Cow position: | chr25:33506753-33507129 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 135, 127 |
| Conread position: | 1117-1548 |
| Cow position: | chr25:3636557-3636126 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1126-1540 |
| Cow position: | chr25:33529028-33529442 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 138, 118 |
| Conread position: | 1126-1542 |
| Cow position: | chr25:24385402-24384986 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 304, 310 |
| Conread position: | 1129-1543 |
| Cow position: | chr25:23420316-23420730 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1142-1548 |
| Cow position: | chr25:34762859-34763262 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 85 |
| Conread position: | 1185-1542 |
| Cow position: | chr25:22235816-22236175 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 1189-1540 |
| Cow position: | chr25:34732615-34732264 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 55 |
| Conread position: | 1190-1548 |
| Cow position: | chr25:36844626-36844277 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 164, 160 |
| Conread position: | 1198-1548 |
| Cow position: | chr25:33298565-33298915 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 141, 146 |
| Conread position: | 1210-1486 |
| Cow position: | chr25:34733995-34733719 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 115, 123 |
| Conread position: | 1210-1542 |
| Cow position: | chr25:33529028-33529360 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 1217-1544 |
| Cow position: | chr25:33506769-33507096 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 1258-1548 |
| Cow position: | chr25:34770146-34769856 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1262-1542 |
| Cow position: | chr25:36844638-36844358 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 94, 87 |
| Conread position: | 1262-1548 |
| Cow position: | chr25:326479-326765 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1269-1542 |
| Cow position: | chr25:4657476-4657203 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 159, 155 |
| Conread position: | 1271-1540 |
| Cow position: | chr25:4657390-4657121 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1271-1541 |
| Cow position: | chr25:3676067-3676337 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 211, 224 |
| Conread position: | 1273-1541 |
| Cow position: | chr25:34732615-34732347 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1273-1542 |
| Cow position: | chr25:34734016-34733747 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 160, 165 |
| Conread position: | 1275-1542 |
| Cow position: | chr25:25652183-25652450 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1275-1544 |
| Cow position: | chr25:3675986-3676256 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1277-1548 |
| Cow position: | chr25:3663928-3664199 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1281-1533 |
| Cow position: | chr25:427330-427582 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 1304-1543 |
| Cow position: | chr25:34762853-34763092 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1332-1548 |
| Cow position: | chr25:33157505-33157289 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 1343-1542 |
| Cow position: | chr25:23267272-23267073 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 128, 57 |
| Conread position: | 1357-1542 |
| Cow position: | chr25:34732615-34732430 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 139, 144 |
Show alignments to all cow chromosomes.