Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010001G06.5 |
| Conread position: | 847-1544 |
| Cow position: | chr28:7757487-7758184 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 409 |
| Conread position: | 849-1420 |
| Cow position: | chr28:34695985-34696556 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 855-1548 |
| Cow position: | chr28:7757411-7758104 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 401 |
| Conread position: | 856-1464 |
| Cow position: | chr28:7810344-7810943 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 350 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 856-1548 |
| Cow position: | chr28:7757580-7758272 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 80 |
| Conread position: | 857-1544 |
| Cow position: | chr28:9289999-9290682 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 402 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 858-1377 |
| Cow position: | chr28:9290168-9290683 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 308 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 858-1380 |
| Cow position: | chr28:9298648-9299167 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 312 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 859-1526 |
| Cow position: | chr28:7757667-7758334 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 142 |
| Conread position: | 859-1536 |
| Cow position: | chr28:9252935-9253611 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 860-1492 |
| Cow position: | chr28:9253019-9253652 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 302 |
| Conread position: | 862-1485 |
| Cow position: | chr28:9298902-9299510 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 373 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 868-1349 |
| Cow position: | chr28:34673447-34673928 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 130, 121 |
| Conread position: | 871-1358 |
| Cow position: | chr28:34696091-34696578 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 873-1107 |
| Cow position: | chr28:34696345-34696579 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 873-1409 |
| Cow position: | chr28:9298580-9299112 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 85 |
| Conread position: | 914-1457 |
| Cow position: | chr28:9290142-9290679 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 922-1119 |
| Cow position: | chr28:33210458-33210656 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 922-1544 |
| Cow position: | chr28:7757394-7758016 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 929-1242 |
| Cow position: | chr28:33210297-33210611 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 264, 295 |
| Conread position: | 935-1526 |
| Cow position: | chr28:34695987-34696578 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 309 |
| Conread position: | 935-1543 |
| Cow position: | chr28:11334146-11333538 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 349 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 171, 208 |
| Conread position: | 935-1548 |
| Cow position: | chr28:34695903-34696516 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 288 |
| Conread position: | 941-1548 |
| Cow position: | chr28:9252932-9253539 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 367 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 74 |
| Conread position: | 945-1544 |
| Cow position: | chr28:7757333-7757932 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 56 |
| Conread position: | 957-1543 |
| Cow position: | chr28:34695841-34696427 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 139 |
| Conread position: | 965-1479 |
| Cow position: | chr28:7810285-7810790 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 88 |
| Conread position: | 968-1548 |
| Cow position: | chr28:11333945-11333371 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 343 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 386, 382 |
| Conread position: | 1018-1548 |
| Cow position: | chr28:11334147-11333617 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 234, 226 |
| Conread position: | 1034-1456 |
| Cow position: | chr28:33210234-33210657 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 218, 210 |
| Conread position: | 1100-1542 |
| Cow position: | chr28:34695816-34696258 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 230, 222 |
| Conread position: | 1108-1540 |
| Cow position: | chr28:33210223-33210657 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1259-1548 |
| Cow position: | chr28:34695891-34696180 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 90, 97 |
| Conread position: | 1280-1548 |
| Cow position: | chr28:33210228-33210496 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 179, 184 |
Show alignments to all cow chromosomes.