Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010001G06.5 |
| Conread position: | 855-1544 |
| Cow position: | chr3:68045597-68046285 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 402 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 857-1539 |
| Cow position: | chr3:62742359-62743032 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 385 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 525, 281 |
| Conread position: | 860-1528 |
| Cow position: | chr3:62722241-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 863-1544 |
| Cow position: | chr3:68027011-68027692 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 381 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 868-1241 |
| Cow position: | chr3:68045945-68046318 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 868-1442 |
| Cow position: | chr3:68045777-68046351 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 328 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 47 |
| Conread position: | 871-1539 |
| Cow position: | chr3:62722314-62721646 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 871-1543 |
| Cow position: | chr3:62742290-62742957 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 387 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 882-1358 |
| Cow position: | chr3:68045875-68046351 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 283 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 26 |
| Conread position: | 935-1351 |
| Cow position: | chr3:20194881-20195297 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 316, 308 |
| Conread position: | 946-1161 |
| Cow position: | chr3:20194448-20194663 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 125, 132 |
| Conread position: | 946-1548 |
| Cow position: | chr3:62722323-62721721 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 959-1525 |
| Cow position: | chr3:20194737-20195303 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 284 |
| Conread position: | 1028-1234 |
| Cow position: | chr3:20194446-20194652 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1032-1539 |
| Cow position: | chr3:20194726-20195233 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 206 |
| Conread position: | 1127-1542 |
| Cow position: | chr3:20194737-20195152 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 133, 111 |
| Conread position: | 1267-1518 |
| Cow position: | chr3:20194434-20194684 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 163, 12 |
| Conread position: | 1286-1548 |
| Cow position: | chr3:20194728-20194990 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1369-1548 |
| Cow position: | chr3:20194727-20194906 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 35 |
Show alignments to all cow chromosomes.