Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010001G06.5 |
| Conread position: | 835-1149 |
| Cow position: | chrX:29045768-29045454 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 845-1389 |
| Cow position: | chrX:13826711-13826167 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 855-1543 |
| Cow position: | chrX:25325591-25324904 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 856-1383 |
| Cow position: | chrX:25310054-25310581 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 317 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 52, 59 |
| Conread position: | 857-1375 |
| Cow position: | chrX:29045178-29044661 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 312 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 857-1548 |
| Cow position: | chrX:14181645-14180954 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 211 |
| Conread position: | 858-1542 |
| Cow position: | chrX:25325087-25324401 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 59 |
| Conread position: | 858-1542 |
| Cow position: | chrX:25325423-25324737 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 130 |
| Conread position: | 860-1540 |
| Cow position: | chrX:25325251-25324571 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 478, 484 |
| Conread position: | 860-1544 |
| Cow position: | chrX:25309722-25310406 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 394 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 860-1548 |
| Cow position: | chrX:25325755-25325067 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 409 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 131, 141 |
| Conread position: | 868-1526 |
| Cow position: | chrX:13826856-13826198 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 378 |
| Conread position: | 868-1536 |
| Cow position: | chrX:25324907-25324239 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 396 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 873-1543 |
| Cow position: | chrX:29045331-29044661 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 391 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 115, 126 |
| Conread position: | 875-1544 |
| Cow position: | chrX:25325320-25324651 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 882-1544 |
| Cow position: | chrX:25325817-25325155 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 223 |
| Conread position: | 884-1548 |
| Cow position: | chrX:13826924-13826260 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 122 |
| Conread position: | 889-1542 |
| Cow position: | chrX:25309667-25310320 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 382 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 188, 181 |
| Conread position: | 923-1517 |
| Cow position: | chrX:14181495-14180901 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 359 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 157, 150 |
| Conread position: | 924-1544 |
| Cow position: | chrX:29045361-29044744 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 359 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 929-1544 |
| Cow position: | chrX:25324930-25324315 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 87 |
| Conread position: | 943-1548 |
| Cow position: | chrX:13826949-13826344 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 130 |
| Conread position: | 1019-1543 |
| Cow position: | chrX:25309713-25310237 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 223, 211 |
Show alignments to all cow chromosomes.