Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010013C03.5.5 |
| Conread position: | 87-326 |
| Cow position: | chr5:60073583-60073807 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 87-326 |
| Cow position: | chr5:60102779-60103018 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-326 |
| Cow position: | chr5:60161814-60162042 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-519 |
| Cow position: | chr5:60075718-60075912 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-519 |
| Cow position: | chr5:60105062-60105256 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-519 |
| Cow position: | chr5:60164004-60164198 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 519-674 |
| Cow position: | chr5:60164528-60164680 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 662-866 |
| Cow position: | chr5:60164764-60164967 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 863-1013 |
| Cow position: | chr5:60107281-60107431 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 863-1013 |
| Cow position: | chr5:60165465-60165615 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 130 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1015-1137 |
| Cow position: | chr5:60107539-60107661 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1015-1137 |
| Cow position: | chr5:60165724-60165846 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1211-1372 |
| Cow position: | chr5:60076077-60076237 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 137 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1211-1372 |
| Cow position: | chr5:60168818-60168978 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 138 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1398-2222 |
| Cow position: | chr5:60078031-60078858 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 627 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 575, 282 |
| Conread position: | 1443-2327 |
| Cow position: | chr5:60170950-60171837 (view UCSC Genome Browser custom track) |
| Alignm length: | 889 |
| Alignm identity: | 730 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 825, 870 |
| Conread position: | 1510-2185 |
| Cow position: | chr5:60066982-60067660 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 44 |
Show alignments to all cow chromosomes.