Cow genome map


           Conread name:
           Ss1.1-Liv1-LVR010013E01.5
        

               Conread position:
               328-739
               

               Cow position:
               chr16:3766875-3766467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               329-715
               

               Cow position:
               chr16:52634042-52634417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               277
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               39, 91
               

               Conread position:
               333-715
               

               Cow position:
               chr16:28920609-28920234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               334-903
               

               Cow position:
               chr16:52500892-52501460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               584
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 41
               

               Conread position:
               349-713
               

               Cow position:
               chr16:53799390-53799744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               387-731
               

               Cow position:
               chr16:5988137-5987803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               95, 22
               

               Conread position:
               446-706
               

               Cow position:
               chr16:30609554-30609808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               118, 52
               
Show alignments to all cow chromosomes.