Cow genome map


           Conread name:
           Ss1.1-Liv1-LVR010013E01.5
        

               Conread position:
               1-1263
               

               Cow position:
               chr3:5856855-5858110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1294
               

               Alignm identity:
               958
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 98
               

               Conread position:
               322-534
               

               Cow position:
               chr3:5446985-5447196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               333-715
               

               Cow position:
               chr3:53401488-53401116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               333-715
               

               Cow position:
               chr3:58546300-58546671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               269
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               225, 8
               

               Conread position:
               339-570
               

               Cow position:
               chr3:65863732-65863961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               208, 9
               

               Conread position:
               345-715
               

               Cow position:
               chr3:21131955-21132326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               473-719
               

               Cow position:
               chr3:4216922-4216673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               538-729
               

               Cow position:
               chr3:5447224-5447410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 0
               
Show alignments to all cow chromosomes.