Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010015H05.5 |
| Conread position: | 2-297 |
| Cow position: | chr26:9096741-9096445 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 46-297 |
| Cow position: | chr26:8890680-8890453 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 299-462 |
| Cow position: | chr26:9094895-9094732 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-604 |
| Cow position: | chr26:11820847-11820704 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-611 |
| Cow position: | chr26:9094547-9094397 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-611 |
| Cow position: | chr26:11021202-11021352 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 611-774 |
| Cow position: | chr26:8888637-8888473 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 138 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 614-774 |
| Cow position: | chr26:11028170-11028330 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 617-774 |
| Cow position: | chr26:9087138-9086981 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 133 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 768-955 |
| Cow position: | chr26:9085826-9085639 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 948-1091 |
| Cow position: | chr26:9077604-9077461 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1089-1280 |
| Cow position: | chr26:9072379-9072188 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1089-1280 |
| Cow position: | chr26:9093515-9093324 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1089-1280 |
| Cow position: | chr26:11814234-11814043 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 1275-1433 |
| Cow position: | chr26:8915028-8914870 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 134 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1278-1395 |
| Cow position: | chr26:8905500-8905382 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1278-1425 |
| Cow position: | chr26:8865440-8865587 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1278-1425 |
| Cow position: | chr26:8881001-8880854 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1278-1425 |
| Cow position: | chr26:9068795-9068648 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 131 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1419-1611 |
| Cow position: | chr26:11809338-11809145 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 1419-1683 |
| Cow position: | chr26:9067930-9067665 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 1419-1683 |
| Cow position: | chr26:9108325-9108063 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 1419-1953 |
| Cow position: | chr26:8913912-8913382 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 189 |
| Conread position: | 1420-1615 |
| Cow position: | chr26:8867809-8868005 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 183, 0 |
Show alignments to all cow chromosomes.