Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010021A02.5 |
| Conread position: | 1-132 |
| Cow position: | chr17:42657154-42657023 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-203 |
| Cow position: | chr17:42656205-42656125 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 74 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 270-502 |
| Cow position: | chr17:42654468-42654236 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-488 |
| Cow position: | chr17:42675027-42674845 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 306-502 |
| Cow position: | chr17:42717958-42717762 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 147, 153 |
| Conread position: | 306-505 |
| Cow position: | chr17:42603532-42603731 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-592 |
| Cow position: | chr17:42653378-42653279 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 652-737 |
| Cow position: | chr17:42650908-42650823 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 739-844 |
| Cow position: | chr17:42649997-42649892 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 843-986 |
| Cow position: | chr17:42630399-42630542 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 843-986 |
| Cow position: | chr17:42649500-42649357 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 138 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 971-1154 |
| Cow position: | chr17:42630673-42630857 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 973-1154 |
| Cow position: | chr17:42671171-42670989 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 973-1154 |
| Cow position: | chr17:42713589-42713407 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 982-1154 |
| Cow position: | chr17:42649259-42649087 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1155-1644 |
| Cow position: | chr17:42648225-42647733 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 223 |
Show alignments to all cow chromosomes.