Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010022A11.5.5 |
| Conread position: | 1-149 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 148-350 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-350 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-350 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-350 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 348-493 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 348-498 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 352-504 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 543-673 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 543-674 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 119 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 543-674 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 543-676 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 121 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 543-676 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 123 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 547-676 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 673-798 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 118 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 673-798 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 116 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 673-798 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 673-798 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 677-798 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 798-1069 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 798-1069 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 798-1069 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 798-1069 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 798-1081 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 83, 53 |
| Conread position: | 1067-1136 |
| Cow position: | |
| Alignm length: | 70 |
| Alignm identity: | 69 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1067-1136 |
| Cow position: | |
| Alignm length: | 70 |
| Alignm identity: | 69 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1135-1266 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 127 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1135-1266 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1135-1266 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 128 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1135-1273 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1265-1402 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 124 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1265-1402 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 123 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1265-1402 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1265-1402 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1265-1402 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1463-1562 |
| Cow position: | |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1544-1707 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 100 |
| Conread position: | 1545-1745 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1545-1798 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 205 |
| Conread position: | 1545-1806 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 208 |
| Conread position: | 1545-1809 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 204 |
Show alignments to all cow chromosomes.