Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010042H06.5 |
| Conread position: | 65-216 |
| Cow position: | chr16:27114195-27114349 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 72-214 |
| Cow position: | chr16:27060581-27060723 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 129 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-213 |
| Cow position: | chr16:27000250-27000389 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 84-212 |
| Cow position: | chr16:28104143-28104015 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 84-212 |
| Cow position: | chr16:28150220-28150092 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-404 |
| Cow position: | chr16:28138674-28138479 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 216-404 |
| Cow position: | chr16:27021433-27021621 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 216-404 |
| Cow position: | chr16:27074027-27074215 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 403-572 |
| Cow position: | chr16:27077216-27077385 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 566-715 |
| Cow position: | chr16:27081673-27081822 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 709-942 |
| Cow position: | chr16:27085006-27085235 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 909-1200 |
| Cow position: | chr16:27136225-27136513 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 201, 25 |
| Conread position: | 909-1277 |
| Cow position: | chr16:27086951-27087321 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 0 |
| Conread position: | 923-1268 |
| Cow position: | chr16:28128583-28128238 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 130, 135 |
| Conread position: | 923-1283 |
| Cow position: | chr16:27034718-27035077 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 108, 103 |
| Conread position: | 1339-2102 |
| Cow position: | chr16:27089833-27090596 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 649 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 437 |
| Conread position: | 1366-1564 |
| Cow position: | chr16:28125015-28124817 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1372-1667 |
| Cow position: | chr16:27038743-27039041 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 1374-1590 |
| Cow position: | chr16:27145153-27145369 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 27, 32 |
Show alignments to all cow chromosomes.