Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010051H06.5 |
| Conread position: | 76-167 |
| Cow position: | chr3:25700240-25700149 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-167 |
| Cow position: | chr3:25779547-25779471 (view UCSC Genome Browser custom track) |
| Alignm length: | 77 |
| Alignm identity: | 71 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 212-317 |
| Cow position: | chr3:25778698-25778593 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-317 |
| Cow position: | chr3:25715197-25715097 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-317 |
| Cow position: | chr3:25733659-25733559 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 224-317 |
| Cow position: | chr3:25744564-25744471 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-316 |
| Cow position: | chr3:25699051-25698969 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-419 |
| Cow position: | chr3:25698883-25698779 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-419 |
| Cow position: | chr3:25715000-25714896 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-419 |
| Cow position: | chr3:25733463-25733359 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 72 |
| Conread position: | 315-419 |
| Cow position: | chr3:25744374-25744270 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 409-515 |
| Cow position: | chr3:25697989-25697883 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-511 |
| Cow position: | chr3:25714154-25714059 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-511 |
| Cow position: | chr3:25732616-25732521 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-511 |
| Cow position: | chr3:25743629-25743534 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-511 |
| Cow position: | chr3:25777296-25777201 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-621 |
| Cow position: | chr3:25768170-25768059 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-623 |
| Cow position: | chr3:25671052-25671165 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-623 |
| Cow position: | chr3:25697802-25697689 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-623 |
| Cow position: | chr3:25713973-25713860 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-623 |
| Cow position: | chr3:25732435-25732322 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-623 |
| Cow position: | chr3:25743447-25743334 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-623 |
| Cow position: | chr3:25777115-25777002 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 621-833 |
| Cow position: | chr3:25724925-25724708 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 111, 156 |
| Conread position: | 621-968 |
| Cow position: | chr3:25773967-25773604 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 244 |
| Conread position: | 621-984 |
| Cow position: | chr3:25683446-25683075 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 122, 156 |
| Conread position: | 621-984 |
| Cow position: | chr3:25706201-25705831 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 111, 206 |
| Conread position: | 621-984 |
| Cow position: | chr3:25737512-25737140 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 111, 156 |
Show alignments to all cow chromosomes.