Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010057A01.5.5 |
| Conread position: | 123-433 |
| Cow position: | chr23:5390923-5391234 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 156-433 |
| Cow position: | chr23:21242338-21242615 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 157-402 |
| Cow position: | chr23:22932416-22932663 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 159-399 |
| Cow position: | chr23:5464298-5464058 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 161-433 |
| Cow position: | chr23:5449022-5448750 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 239 |
| Conread position: | 167-433 |
| Cow position: | chr23:21283956-21284225 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 432-689 |
| Cow position: | chr23:5613378-5613123 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 432-714 |
| Cow position: | chr23:5398918-5399200 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-714 |
| Cow position: | chr23:5463580-5463298 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-714 |
| Cow position: | chr23:21267646-21267921 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 432-714 |
| Cow position: | chr23:22907851-22908130 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 432-716 |
| Cow position: | chr23:5446517-5446233 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-732 |
| Cow position: | chr23:21244785-21245086 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 0 |
| Conread position: | 432-732 |
| Cow position: | chr23:22934736-22935037 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 0 |
| Conread position: | 432-732 |
| Cow position: | chr23:22957043-22957344 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 263, 256 |
| Conread position: | 716-809 |
| Cow position: | chr23:5445688-5445595 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-827 |
| Cow position: | chr23:21245812-21245923 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 716-828 |
| Cow position: | chr23:21268654-21268766 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 718-827 |
| Cow position: | chr23:22936840-22936949 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.