Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010067E10.5.5 |
| Conread position: | 73-740 |
| Cow position: | chr21:39153003-39152363 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 633, 66 |
| Conread position: | 73-740 |
| Cow position: | chr21:40604841-40605481 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 479, 85 |
| Conread position: | 73-740 |
| Cow position: | chr21:40639740-40639091 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 73-740 |
| Cow position: | chr21:40655209-40654569 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 73-740 |
| Cow position: | chr21:40677263-40676614 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 73-740 |
| Cow position: | chr21:40705409-40704769 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 252-627 |
| Cow position: | chr21:39175665-39175290 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 252-747 |
| Cow position: | chr21:39199258-39198768 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 275, 42 |
| Conread position: | 254-736 |
| Cow position: | chr21:39247705-39248181 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 161 |
| Conread position: | 257-740 |
| Cow position: | chr21:39304885-39305365 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 305 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 294, 37 |
| Conread position: | 258-740 |
| Cow position: | chr21:38962547-38962065 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 739-949 |
| Cow position: | chr21:40607405-40607612 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 739-1015 |
| Cow position: | chr21:39149955-39149682 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 739-1015 |
| Cow position: | chr21:40637247-40636971 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 739-1015 |
| Cow position: | chr21:40652739-40652466 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 739-1015 |
| Cow position: | chr21:40674986-40674713 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 739-1015 |
| Cow position: | chr21:40702935-40702662 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1001-1168 |
| Cow position: | chr21:39148563-39148399 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1001-1168 |
| Cow position: | chr21:40650871-40650707 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1001-1168 |
| Cow position: | chr21:40701539-40701375 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1010-1168 |
| Cow position: | chr21:40610212-40610370 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1010-1173 |
| Cow position: | chr21:40634374-40634210 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 148 |
| Conread position: | 1034-1167 |
| Cow position: | chr21:40672616-40672483 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 109, 119 |
| Conread position: | 1155-1524 |
| Cow position: | chr21:40649659-40649287 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 298 |
| Conread position: | 1155-1576 |
| Cow position: | chr21:39147359-39146938 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 1155-1576 |
| Cow position: | chr21:40700330-40699908 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 1163-1443 |
| Cow position: | chr21:40671456-40671184 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 83, 212 |
| Conread position: | 1163-1583 |
| Cow position: | chr21:40611952-40612370 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 1163-1585 |
| Cow position: | chr21:40633161-40632732 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 362 |
Show alignments to all cow chromosomes.